RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 TMEM230Q96A57 120 aa8.41□□□□□ -1.06
CDH3-210ENST00000569117 SSBP4Q9BWG4 385 aaPredicted RBP8.41□□□□□ -1.06
CDH3-210ENST00000569117 LIN7CQ9NUP9 197 aaKnown RBP8.41□□□□□ -1.06
CDH3-210ENST00000569117 MTORP42345 2549 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 ANK3Q12955 4377 aaKnown RBP8.4□□□□□ -1.06
CDH3-210ENST00000569117 CRYM-AS1A6NIL9 109 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 LINC00473A8K010 186 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 H0Y980 276 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 H0YJW9 148 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 TIMM23O14925 209 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 PGLYRP1O75594 196 aaPredicted RBP8.4□□□□□ -1.06
CDH3-210ENST00000569117 APOA2P02652 100 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 CT45A6P0DMU7 189 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 CT45A5P0DMU8 189 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 CT45A7P0DMV0 189 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 F2RP25116 425 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 RAB13P51153 203 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 RAG2P55895 527 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 RPL30P62888 115 aaKnown RBP8.4□□□□□ -1.06
CDH3-210ENST00000569117 OXA1LQ15070 435 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 AANATQ16613 207 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 TMEM128Q5BJH2 165 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 PLET1Q6UQ28 207 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 TBC1D26Q86UD7 250 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 SLC25A42Q86VD7 318 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 BCL6BQ8N143 479 aaPredicted RBP8.4□□□□□ -1.06
CDH3-210ENST00000569117 ZNF383Q8NA42 475 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 DRAXINQ8NBI3 349 aaPredicted RBP8.4□□□□□ -1.06
CDH3-210ENST00000569117 ADAD2Q8NCV1 583 aaKnown RBP8.4□□□□□ -1.06
CDH3-210ENST00000569117 OR5AN1Q8NGI8 311 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 OR51H1Q8NH63 302 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 TCTEX1D2Q8WW35 142 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 GPHA2Q96T91 129 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 MEGF9Q9H1U4 602 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 PRDM13Q9H4Q3 707 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 NAA60Q9H7X0 242 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 FLVCR2Q9UPI3 526 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 FAM96BQ9Y3D0 163 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 MXRA5Q9NR99 2828 aa8.4□□□□□ -1.06
CDH3-210ENST00000569117 TRAV6A0A075B6T7 132 aa8.39□□□□□ -1.07
CDH3-210ENST00000569117 MDFIC2A0A1B0GVS7 189 aa8.39□□□□□ -1.07
CDH3-210ENST00000569117 INAFM1C9JVW0 142 aa8.39□□□□□ -1.07
CDH3-210ENST00000569117 MPPED1O15442 326 aa8.39□□□□□ -1.07
CDH3-210ENST00000569117 RBFOX2O43251 390 aaKnown RBP eCLIP8.39□□□□□ -1.07
CDH3-210ENST00000569117 B3GALNT1O75752 331 aa8.39□□□□□ -1.07
CDH3-210ENST00000569117 VENTXO95231 258 aa8.39□□□□□ -1.07
CDH3-210ENST00000569117 H2AFB2P0C5Z0 115 aa8.39□□□□□ -1.07
CDH3-210ENST00000569117 SPNP16150 400 aa8.39□□□□□ -1.07
CDH3-210ENST00000569117 SRD5A1P18405 259 aa8.39□□□□□ -1.07
CDH3-210ENST00000569117 PAX6P26367 422 aa8.39□□□□□ -1.07
CDH3-210ENST00000569117 KIR2DS2P43631 304 aa8.39□□□□□ -1.07
CDH3-210ENST00000569117 DHODHQ02127 395 aa8.39□□□□□ -1.07
CDH3-210ENST00000569117 LRRC75BQ2VPJ9 315 aa8.39□□□□□ -1.07
CDH3-210ENST00000569117 DEFB112Q30KQ8 113 aa8.39□□□□□ -1.07
CDH3-210ENST00000569117 PDPNQ86YL7 162 aa8.39□□□□□ -1.07
CDH3-210ENST00000569117 TCTEX1D1Q8N7M0 179 aa8.39□□□□□ -1.07
CDH3-210ENST00000569117 MINDY2Q8NBR6 621 aa8.39□□□□□ -1.07
CDH3-210ENST00000569117 CHPT1Q8WUD6 406 aa8.39□□□□□ -1.07
CDH3-210ENST00000569117 C22orf15Q8WYQ4 148 aa8.39□□□□□ -1.07
CDH3-210ENST00000569117 GALNT14Q96FL9 552 aa8.39□□□□□ -1.07
CDH3-210ENST00000569117 MARVELD1Q9BSK0 173 aa8.39□□□□□ -1.07
CDH3-210ENST00000569117 BEX2Q9BXY8 128 aa8.39□□□□□ -1.07
CDH3-210ENST00000569117 ALX4Q9H161 411 aaPredicted RBP8.39□□□□□ -1.07
CDH3-210ENST00000569117 FAM212BQ9NTI7 297 aaPredicted RBP8.39□□□□□ -1.07
CDH3-210ENST00000569117 SLC35D1Q9NTN3 355 aa8.39□□□□□ -1.07
CDH3-210ENST00000569117 PRELID3BQ9Y3B1 194 aa8.39□□□□□ -1.07
CDH3-210ENST00000569117 WASHC3Q9Y3C0 194 aa8.39□□□□□ -1.07
CDH3-210ENST00000569117 SOX21Q9Y651 276 aaPredicted RBP8.39□□□□□ -1.07
CDH3-210ENST00000569117 FN1P02751 2386 aaKnown RBP8.39□□□□□ -1.07
CDH3-210ENST00000569117 TEX13DA0A0J9YY54 714 aaPredicted RBP8.38□□□□□ -1.07
CDH3-210ENST00000569117 C3orf85A0A1B0GTC6 90 aa8.38□□□□□ -1.07
CDH3-210ENST00000569117 FAM90A9PA6NNJ1 464 aa8.38□□□□□ -1.07
CDH3-210ENST00000569117 RRASP10301 218 aa8.38□□□□□ -1.07
CDH3-210ENST00000569117 AKR1C4P17516 323 aa8.38□□□□□ -1.07
CDH3-210ENST00000569117 ANXA7P20073 488 aaKnown RBP8.38□□□□□ -1.07
CDH3-210ENST00000569117 CD1BP29016 333 aa8.38□□□□□ -1.07
CDH3-210ENST00000569117 BRS3P32247 399 aa8.38□□□□□ -1.07
CDH3-210ENST00000569117 MC5RP33032 325 aa8.38□□□□□ -1.07
CDH3-210ENST00000569117 BRWD1-AS2P59051 145 aa8.38□□□□□ -1.07
CDH3-210ENST00000569117 LINC00205P59089 165 aa8.38□□□□□ -1.07
CDH3-210ENST00000569117 SUPT4H1P63272 117 aaKnown RBP8.38□□□□□ -1.07
CDH3-210ENST00000569117 PPP1R1AQ13522 171 aa8.38□□□□□ -1.07
CDH3-210ENST00000569117 RTL8BQ17RB0 113 aa8.38□□□□□ -1.07
CDH3-210ENST00000569117 TRIM16LQ309B1 348 aa8.38□□□□□ -1.07
CDH3-210ENST00000569117 OR2B11Q5JQS5 317 aa8.38□□□□□ -1.07
CDH3-210ENST00000569117 LCE2AQ5TA79 106 aaPredicted RBP8.38□□□□□ -1.07
CDH3-210ENST00000569117 DHRS7BQ6IAN0 325 aaPredicted RBP8.38□□□□□ -1.07
CDH3-210ENST00000569117 C11orf88Q6PI97 169 aa8.38□□□□□ -1.07
CDH3-210ENST00000569117 CCBE1Q6UXH8 406 aaPredicted RBP8.38□□□□□ -1.07
CDH3-210ENST00000569117 GLDNQ6ZMI3 551 aaPredicted RBP8.38□□□□□ -1.07
CDH3-210ENST00000569117 Q71RC1 249 aaPredicted RBP8.38□□□□□ -1.07
CDH3-210ENST00000569117 MOB3BQ86TA1 216 aa8.38□□□□□ -1.07
CDH3-210ENST00000569117 SGPP2Q8IWX5 399 aa8.38□□□□□ -1.07
CDH3-210ENST00000569117 OR4S2Q8NH73 311 aa8.38□□□□□ -1.07
CDH3-210ENST00000569117 CD300LFQ8TDQ1 290 aa8.38□□□□□ -1.07
CDH3-210ENST00000569117 CAPSLQ8WWF8 208 aa8.38□□□□□ -1.07
CDH3-210ENST00000569117 ZNF48Q96MX3 618 aaPredicted RBP8.38□□□□□ -1.07
CDH3-210ENST00000569117 TP53RKQ96S44 253 aa8.38□□□□□ -1.07
CDH3-210ENST00000569117 IGHV3-72A0A0B4J1Y9 119 aa8.37□□□□□ -1.07
CDH3-210ENST00000569117 INMT-MINDY4F8WBC2 141 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms