RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 A8MU10 97 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 FAAHO00519 579 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 OR2A4O95047 310 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 S1PR2O95136 353 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 CDS2O95674 445 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 DCNP07585 359 aaKnown RBP3.77□□□□□ -1.81
UBR1-208ENST00000569066 ADRA2AP08913 450 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 TRGC1P0CF51 173 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 SULT1A1P50225 295 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 POLR2HP52434 150 aaKnown RBP3.77□□□□□ -1.81
UBR1-208ENST00000569066 CLDN12P56749 244 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 OR4D2P58180 307 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 OR10A3P58181 314 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 OR12D2P58182 307 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 TAS2R30P59541 319 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 PAFAH1B2P68402 229 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 STUMQ69YW2 141 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 RIMKLAQ8IXN7 391 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 SAXO1Q8IYX7 474 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 OR8D1Q8WZ84 308 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 RERGQ96A58 199 aaPredicted RBP3.77□□□□□ -1.81
UBR1-208ENST00000569066 MRAP2Q96G30 205 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 OR2A7Q96R45 310 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 C20orf144Q9BQM9 153 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 NECAP2Q9NVZ3 263 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 ATRNO75882 1429 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 CRB1P82279 1406 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 TSPOAP1O95153 1857 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 RAPGEF6Q8TEU7 1601 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 CLTCQ00610 1675 aaKnown RBP3.76□□□□□ -1.81
UBR1-208ENST00000569066 USP54Q70EL1 1684 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 FMN2Q9NZ56 1722 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 IGSF23A1L1A6 192 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 NKX2-6A6NCS4 301 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 FGF16O43320 207 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 PTHP01270 115 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 C1QAP02745 245 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 TRGC2P03986 189 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 CD74P04233 296 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 OR5AC1P0C628 307 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 UBBP0CG47 229 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 ESDP10768 282 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 ZNF83P51522 516 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 PLCXD2Q0VAA5 305 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 SSX1Q16384 188 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 LTC4SQ16873 150 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 IQCJQ1A5X6 159 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 FBXW12Q6X9E4 464 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 MBOAT2Q6ZWT7 520 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 OR5AR1Q8NGP9 310 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 FRZBQ92765 325 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 RAB8BQ92930 207 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 SEH1LQ96EE3 360 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 ZNF75AQ96N20 296 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 CCDC115Q96NT0 180 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 CIB3Q96Q77 187 aaPredicted RBP3.76□□□□□ -1.81
UBR1-208ENST00000569066 OR7D2Q96RA2 312 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 TRIB3Q96RU7 358 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 CHAC1Q9BUX1 264 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 EDA2RQ9HAV5 297 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 MTFP1Q9UDX5 166 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 HDGFL3Q9Y3E1 203 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 KCNE3Q9Y6H6 103 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 C4AP0C0L4 1744 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 C4BP0C0L5 1744 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 MAP3K4Q9Y6R4 1608 aa3.76□□□□□ -1.81
UBR1-208ENST00000569066 FXYD6-FXYD2A0A087WZ82 144 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 TRAPPC13A5PLN9 417 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 RNASEK-C17orf49H0YIS7 233 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 RFXANKO14593 260 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 MT-ND4P03905 459 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 MIPP30301 263 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 KRTAP10-3P60369 221 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 UBA52P62987 128 aaKnown RBP3.75□□□□□ -1.81
UBR1-208ENST00000569066 GNG3P63215 75 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 EBPQ15125 230 aaKnown RBP3.75□□□□□ -1.81
UBR1-208ENST00000569066 VAMP3Q15836 100 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 MAPK14Q16539 360 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 ACSM3Q53FZ2 586 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 IGFL2Q6UWQ7 119 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 NIT1Q86X76 327 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 DOLPP1Q86YN1 238 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 APRG1Q8IVJ8 170 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 C5orf17Q8NAS9 161 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 FBXO36Q8NEA4 188 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 FAM45AQ8TCE6 357 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 SLC25A46Q96AG3 418 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 WDR34Q96EX3 536 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 BMFQ96LC9 184 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 LYSMD1Q96S90 227 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 GINS3Q9BRX5 216 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 RSPO3Q9BXY4 272 aaPredicted RBP3.75□□□□□ -1.81
UBR1-208ENST00000569066 FXYD6Q9H0Q3 95 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 BOLA2Q9H3K6 86 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.75□□□□□ -1.81
UBR1-208ENST00000569066 RBM22Q9NW64 420 aaKnown RBP eCLIP3.75□□□□□ -1.81
UBR1-208ENST00000569066 CLN6Q9NWW5 311 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 ANAPC11Q9NYG5 84 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 OR5AC2Q9NZP5 309 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 HHLA2Q9UM44 414 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms