RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 LUMP51884 338 aaPredicted RBP15.76■□□□□ 0.11
CLK3-225ENST00000569063 FXYD3Q14802 87 aa15.76■□□□□ 0.11
CLK3-225ENST00000569063 ACTBL2Q562R1 376 aa15.76■□□□□ 0.11
CLK3-225ENST00000569063 UNQ5815/PRO19632Q6UWF5 114 aa15.76■□□□□ 0.11
CLK3-225ENST00000569063 LFNGQ8NES3 379 aa15.76■□□□□ 0.11
CLK3-225ENST00000569063 OR1N2Q8NGR9 330 aa15.76■□□□□ 0.11
CLK3-225ENST00000569063 ARPC1AQ92747 370 aa15.76■□□□□ 0.11
CLK3-225ENST00000569063 SRRM4A7MD48 611 aaKnown RBP15.75■□□□□ 0.11
CLK3-225ENST00000569063 LINC00473A8K010 186 aa15.75■□□□□ 0.11
CLK3-225ENST00000569063 K7EIL1 84 aa15.75■□□□□ 0.11
CLK3-225ENST00000569063 SHOXO15266 292 aa15.75■□□□□ 0.11
CLK3-225ENST00000569063 RPS19P39019 145 aaKnown RBP15.75■□□□□ 0.11
CLK3-225ENST00000569063 GNB1P62873 340 aa15.75■□□□□ 0.11
CLK3-225ENST00000569063 SSBP2P81877 361 aaPredicted RBP15.75■□□□□ 0.11
CLK3-225ENST00000569063 ZMAT5Q9UDW3 170 aaKnown RBP15.75■□□□□ 0.11
CLK3-225ENST00000569063 TUSC2O75896 110 aa15.74■□□□□ 0.11
CLK3-225ENST00000569063 IGLV2-14P01704 120 aa15.74■□□□□ 0.11
CLK3-225ENST00000569063 OR8U8P0C7N1 319 aa15.74■□□□□ 0.11
CLK3-225ENST00000569063 ZNF616Q08AN1 781 aa15.74■□□□□ 0.11
CLK3-225ENST00000569063 PJVKQ0ZLH3 352 aa15.74■□□□□ 0.11
CLK3-225ENST00000569063 ASPHD1Q5U4P2 390 aa15.74■□□□□ 0.11
CLK3-225ENST00000569063 HOGA1Q86XE5 327 aa15.74■□□□□ 0.11
CLK3-225ENST00000569063 CASTOR1Q8WTX7 329 aa15.74■□□□□ 0.11
CLK3-225ENST00000569063 OR5B12Q96R08 314 aa15.74■□□□□ 0.11
CLK3-225ENST00000569063 AUNIPQ9H7T9 357 aa15.74■□□□□ 0.11
CLK3-225ENST00000569063 IGKV1D-13A0A0B4J2D9 117 aa15.73■□□□□ 0.11
CLK3-225ENST00000569063 WI2-2373I1.2A0A1W2PRP0 233 aa15.73■□□□□ 0.11
CLK3-225ENST00000569063 J3QRK9 145 aa15.73■□□□□ 0.11
CLK3-225ENST00000569063 CNIH1O95406 144 aa15.73■□□□□ 0.11
CLK3-225ENST00000569063 IGKV1-13P0DP09 117 aa15.73■□□□□ 0.11
CLK3-225ENST00000569063 CD40LGP29965 261 aa15.73■□□□□ 0.11
CLK3-225ENST00000569063 LSM3P62310 102 aaKnown RBP15.73■□□□□ 0.11
CLK3-225ENST00000569063 C9orf66Q5T8R8 295 aa15.73■□□□□ 0.11
CLK3-225ENST00000569063 TEX45Q8NA69 505 aa15.73■□□□□ 0.11
CLK3-225ENST00000569063 BEST4Q8NFU0 473 aa15.73■□□□□ 0.11
CLK3-225ENST00000569063 GRPEL2Q8TAA5 225 aa15.73■□□□□ 0.11
CLK3-225ENST00000569063 OSR1Q8TAX0 266 aaPredicted RBP15.73■□□□□ 0.11
CLK3-225ENST00000569063 SLA2Q9H6Q3 261 aa15.73■□□□□ 0.11
CLK3-225ENST00000569063 RBMX2Q9Y388 322 aaKnown RBP15.73■□□□□ 0.11
CLK3-225ENST00000569063 XRCC3O43542 346 aa15.72■□□□□ 0.11
CLK3-225ENST00000569063 CRYZL1O95825 349 aa15.72■□□□□ 0.11
CLK3-225ENST00000569063 UBE2KP61086 200 aa15.72■□□□□ 0.11
CLK3-225ENST00000569063 MRGPRG-AS1Q2M3A8 158 aa15.72■□□□□ 0.11
CLK3-225ENST00000569063 VMA21Q3ZAQ7 101 aa15.72■□□□□ 0.11
CLK3-225ENST00000569063 OVCH2Q7RTZ1 564 aa15.72■□□□□ 0.11
CLK3-225ENST00000569063 GVQW1Q8N7I0 195 aa15.72■□□□□ 0.11
CLK3-225ENST00000569063 S100A16Q96FQ6 103 aaKnown RBP15.72■□□□□ 0.11
CLK3-225ENST00000569063 TMEM68Q96MH6 324 aa15.72■□□□□ 0.11
CLK3-225ENST00000569063 SEC14L6B5MCN3 397 aa15.71■□□□□ 0.11
CLK3-225ENST00000569063 LGALS1P09382 135 aaKnown RBP15.71■□□□□ 0.11
CLK3-225ENST00000569063 CBX5P45973 191 aa15.71■□□□□ 0.11
CLK3-225ENST00000569063 ARPC4P59998 168 aa15.71■□□□□ 0.11
CLK3-225ENST00000569063 DGCR2P98153 550 aa15.71■□□□□ 0.11
CLK3-225ENST00000569063 EIF4EBP1Q13541 118 aaPredicted RBP15.71■□□□□ 0.11
CLK3-225ENST00000569063 UBE2NLQ5JXB2 153 aa15.71■□□□□ 0.11
CLK3-225ENST00000569063 MS4A10Q96PG2 267 aa15.71■□□□□ 0.11
CLK3-225ENST00000569063 ALX4Q9H161 411 aaPredicted RBP15.71■□□□□ 0.11
CLK3-225ENST00000569063 SCOCQ9UIL1 159 aa15.71■□□□□ 0.11
CLK3-225ENST00000569063 PRELID3BQ9Y3B1 194 aa15.71■□□□□ 0.11
CLK3-225ENST00000569063 H3BUA1 57 aa15.7■□□□□ 0.1
CLK3-225ENST00000569063 RAMP3O60896 148 aa15.7■□□□□ 0.1
CLK3-225ENST00000569063 FCGR3BO75015 233 aa15.7■□□□□ 0.1
CLK3-225ENST00000569063 TPPP2P59282 170 aa15.7■□□□□ 0.1
CLK3-225ENST00000569063 RPL30P62888 115 aaKnown RBP15.7■□□□□ 0.1
CLK3-225ENST00000569063 PRSS8Q16651 343 aa15.7■□□□□ 0.1
CLK3-225ENST00000569063 KCTD9Q7L273 389 aa15.7■□□□□ 0.1
CLK3-225ENST00000569063 SLC25A46Q96AG3 418 aa15.7■□□□□ 0.1
CLK3-225ENST00000569063 RHOVQ96L33 236 aa15.7■□□□□ 0.1
CLK3-225ENST00000569063 HSD17B10Q99714 261 aaKnown RBP15.7■□□□□ 0.1
CLK3-225ENST00000569063 FUNDC2Q9BWH2 189 aa15.7■□□□□ 0.1
CLK3-225ENST00000569063 BRI3O95415 125 aa15.69■□□□□ 0.1
CLK3-225ENST00000569063 TRGV3P03979 118 aa15.69■□□□□ 0.1
CLK3-225ENST00000569063 PTHLHP12272 177 aa15.69■□□□□ 0.1
CLK3-225ENST00000569063 FCGR2CP31995 323 aa15.69■□□□□ 0.1
CLK3-225ENST00000569063 MSMO1Q15800 293 aa15.69■□□□□ 0.1
CLK3-225ENST00000569063 POC5Q8NA72 575 aa15.69■□□□□ 0.1
CLK3-225ENST00000569063 OR5T1Q8NG75 326 aa15.69■□□□□ 0.1
CLK3-225ENST00000569063 KCTD12Q96CX2 325 aaKnown RBP15.69■□□□□ 0.1
CLK3-225ENST00000569063 MRPS7Q9Y2R9 242 aaKnown RBP15.69■□□□□ 0.1
CLK3-225ENST00000569063 LINC01619G3V211 115 aa15.68■□□□□ 0.1
CLK3-225ENST00000569063 AADACP22760 399 aa15.68■□□□□ 0.1
CLK3-225ENST00000569063 INSL3P51460 131 aa15.68■□□□□ 0.1
CLK3-225ENST00000569063 DEFB121Q5J5C9 76 aa15.68■□□□□ 0.1
CLK3-225ENST00000569063 ZNF66Q6ZN08 573 aa15.68■□□□□ 0.1
CLK3-225ENST00000569063 SAMD12Q8N8I0 201 aa15.68■□□□□ 0.1
CLK3-225ENST00000569063 OR13F1Q8NGS4 319 aa15.68■□□□□ 0.1
CLK3-225ENST00000569063 DCUN1D4Q92564 292 aa15.68■□□□□ 0.1
CLK3-225ENST00000569063 SNAPC3Q92966 411 aa15.68■□□□□ 0.1
CLK3-225ENST00000569063 DCUN1D5Q9BTE7 237 aa15.68■□□□□ 0.1
CLK3-225ENST00000569063 IGHV4OR15-8A0A075B7B6 117 aa15.67■□□□□ 0.1
CLK3-225ENST00000569063 A0A087WW49 117 aa15.67■□□□□ 0.1
CLK3-225ENST00000569063 PPYP01298 95 aa15.67■□□□□ 0.1
CLK3-225ENST00000569063 HSPB1P04792 205 aaKnown RBP15.67■□□□□ 0.1
CLK3-225ENST00000569063 NCS1P62166 190 aa15.67■□□□□ 0.1
CLK3-225ENST00000569063 CDK10Q15131 360 aa15.67■□□□□ 0.1
CLK3-225ENST00000569063 TMEM69Q5SWH9 247 aa15.67■□□□□ 0.1
CLK3-225ENST00000569063 IDO2Q6ZQW0 420 aa15.67■□□□□ 0.1
CLK3-225ENST00000569063 MFSD4AQ8N468 514 aa15.67■□□□□ 0.1
CLK3-225ENST00000569063 OR5AP2Q8NGF4 316 aa15.67■□□□□ 0.1
CLK3-225ENST00000569063 DLX4Q92988 240 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms