RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 WI2-2373I1.2A0A1W2PRP0 233 aa22.79■■□□□ 1.24
RAB40C-211ENST00000568586 LINC00473A8K010 186 aa22.79■■□□□ 1.24
RAB40C-211ENST00000568586 AIREO43918 545 aa22.79■■□□□ 1.24
RAB40C-211ENST00000568586 TUSC2O75896 110 aa22.79■■□□□ 1.24
RAB40C-211ENST00000568586 SLC22A5O76082 557 aa22.79■■□□□ 1.24
RAB40C-211ENST00000568586 GNB1P62873 340 aa22.79■■□□□ 1.24
RAB40C-211ENST00000568586 CBX3Q13185 183 aa22.79■■□□□ 1.24
RAB40C-211ENST00000568586 FXYD3Q14802 87 aa22.79■■□□□ 1.24
RAB40C-211ENST00000568586 UNQ5815/PRO19632Q6UWF5 114 aa22.79■■□□□ 1.24
RAB40C-211ENST00000568586 HARBI1Q96MB7 349 aa22.79■■□□□ 1.24
RAB40C-211ENST00000568586 A3GALT2U3KPV4 340 aa22.79■■□□□ 1.24
RAB40C-211ENST00000568586 IGLV2-14P01704 120 aa22.78■■□□□ 1.24
RAB40C-211ENST00000568586 OR8U8P0C7N1 319 aa22.78■■□□□ 1.24
RAB40C-211ENST00000568586 NFYAP23511 347 aaPredicted RBP22.78■■□□□ 1.24
RAB40C-211ENST00000568586 RAB25P57735 213 aa22.78■■□□□ 1.24
RAB40C-211ENST00000568586 ZNF616Q08AN1 781 aa22.78■■□□□ 1.24
RAB40C-211ENST00000568586 MRGPRG-AS1Q2M3A8 158 aa22.78■■□□□ 1.24
RAB40C-211ENST00000568586 ABHD5Q8WTS1 349 aa22.78■■□□□ 1.24
RAB40C-211ENST00000568586 AUNIPQ9H7T9 357 aa22.78■■□□□ 1.24
RAB40C-211ENST00000568586 RPS19P39019 145 aaKnown RBP22.77■■□□□ 1.24
RAB40C-211ENST00000568586 PJVKQ0ZLH3 352 aa22.77■■□□□ 1.24
RAB40C-211ENST00000568586 TEX45Q8NA69 505 aa22.77■■□□□ 1.24
RAB40C-211ENST00000568586 SLA2Q9H6Q3 261 aa22.77■■□□□ 1.24
RAB40C-211ENST00000568586 DIABLOQ9NR28 239 aa22.77■■□□□ 1.24
RAB40C-211ENST00000568586 SHOXO15266 292 aa22.76■■□□□ 1.23
RAB40C-211ENST00000568586 TGFBR1P36897 503 aa22.76■■□□□ 1.23
RAB40C-211ENST00000568586 C9orf66Q5T8R8 295 aa22.76■■□□□ 1.23
RAB40C-211ENST00000568586 HOGA1Q86XE5 327 aa22.76■■□□□ 1.23
RAB40C-211ENST00000568586 OSR1Q8TAX0 266 aaPredicted RBP22.76■■□□□ 1.23
RAB40C-211ENST00000568586 TMEM68Q96MH6 324 aa22.76■■□□□ 1.23
RAB40C-211ENST00000568586 SCOCQ9UIL1 159 aa22.76■■□□□ 1.23
RAB40C-211ENST00000568586 RBMX2Q9Y388 322 aaKnown RBP22.76■■□□□ 1.23
RAB40C-211ENST00000568586 IGKV1D-13A0A0B4J2D9 117 aa22.75■■□□□ 1.23
RAB40C-211ENST00000568586 BRI3O95415 125 aa22.75■■□□□ 1.23
RAB40C-211ENST00000568586 IGKV1-13P0DP09 117 aa22.75■■□□□ 1.23
RAB40C-211ENST00000568586 UBE2KP61086 200 aa22.75■■□□□ 1.23
RAB40C-211ENST00000568586 EIF4EBP1Q13541 118 aaPredicted RBP22.75■■□□□ 1.23
RAB40C-211ENST00000568586 OVCH2Q7RTZ1 564 aa22.75■■□□□ 1.23
RAB40C-211ENST00000568586 BEST4Q8NFU0 473 aa22.75■■□□□ 1.23
RAB40C-211ENST00000568586 OR5B12Q96R08 314 aa22.75■■□□□ 1.23
RAB40C-211ENST00000568586 H3BUA1 57 aa22.74■■□□□ 1.23
RAB40C-211ENST00000568586 LGALS1P09382 135 aaKnown RBP22.74■■□□□ 1.23
RAB40C-211ENST00000568586 DGCR2P98153 550 aa22.74■■□□□ 1.23
RAB40C-211ENST00000568586 GRPEL2Q8TAA5 225 aa22.74■■□□□ 1.23
RAB40C-211ENST00000568586 CASTOR1Q8WTX7 329 aa22.74■■□□□ 1.23
RAB40C-211ENST00000568586 RHOVQ96L33 236 aa22.74■■□□□ 1.23
RAB40C-211ENST00000568586 TNCP24821 2201 aa22.74■■□□□ 1.23
RAB40C-211ENST00000568586 COL7A1Q02388 2944 aa22.73■■□□□ 1.23
RAB40C-211ENST00000568586 XRCC3O43542 346 aa22.73■■□□□ 1.23
RAB40C-211ENST00000568586 RAMP3O60896 148 aa22.73■■□□□ 1.23
RAB40C-211ENST00000568586 CNIH1O95406 144 aa22.73■■□□□ 1.23
RAB40C-211ENST00000568586 CRYZL1O95825 349 aa22.73■■□□□ 1.23
RAB40C-211ENST00000568586 CD40LGP29965 261 aa22.73■■□□□ 1.23
RAB40C-211ENST00000568586 GVQW1Q8N7I0 195 aa22.73■■□□□ 1.23
RAB40C-211ENST00000568586 DNAH9Q9NYC9 4486 aa22.72■■□□□ 1.23
RAB40C-211ENST00000568586 SEC14L6B5MCN3 397 aa22.72■■□□□ 1.23
RAB40C-211ENST00000568586 MSMO1Q15800 293 aa22.72■■□□□ 1.23
RAB40C-211ENST00000568586 PRSS8Q16651 343 aa22.72■■□□□ 1.23
RAB40C-211ENST00000568586 VMA21Q3ZAQ7 101 aa22.72■■□□□ 1.23
RAB40C-211ENST00000568586 ALX4Q9H161 411 aaPredicted RBP22.72■■□□□ 1.23
RAB40C-211ENST00000568586 J3QRK9 145 aa22.71■■□□□ 1.23
RAB40C-211ENST00000568586 CBX5P45973 191 aa22.71■■□□□ 1.23
RAB40C-211ENST00000568586 INSL3P51460 131 aa22.71■■□□□ 1.23
RAB40C-211ENST00000568586 RPL30P62888 115 aaKnown RBP22.71■■□□□ 1.23
RAB40C-211ENST00000568586 POC5Q8NA72 575 aa22.71■■□□□ 1.23
RAB40C-211ENST00000568586 S100A16Q96FQ6 103 aaKnown RBP22.71■■□□□ 1.23
RAB40C-211ENST00000568586 HSD17B10Q99714 261 aaKnown RBP22.71■■□□□ 1.23
RAB40C-211ENST00000568586 PRELID3BQ9Y3B1 194 aa22.71■■□□□ 1.23
RAB40C-211ENST00000568586 UBE2NLQ5JXB2 153 aa22.7■■□□□ 1.22
RAB40C-211ENST00000568586 KCTD9Q7L273 389 aa22.7■■□□□ 1.22
RAB40C-211ENST00000568586 SLC25A46Q96AG3 418 aa22.7■■□□□ 1.22
RAB40C-211ENST00000568586 KCTD12Q96CX2 325 aaKnown RBP22.7■■□□□ 1.22
RAB40C-211ENST00000568586 MS4A10Q96PG2 267 aa22.7■■□□□ 1.22
RAB40C-211ENST00000568586 LINC01619G3V211 115 aa22.69■■□□□ 1.22
RAB40C-211ENST00000568586 TPPP2P59282 170 aa22.69■■□□□ 1.22
RAB40C-211ENST00000568586 ARPC4P59998 168 aa22.69■■□□□ 1.22
RAB40C-211ENST00000568586 LSM3P62310 102 aaKnown RBP22.69■■□□□ 1.22
RAB40C-211ENST00000568586 DCUN1D4Q92564 292 aa22.69■■□□□ 1.22
RAB40C-211ENST00000568586 SNAPC3Q92966 411 aa22.69■■□□□ 1.22
RAB40C-211ENST00000568586 FCGR3BO75015 233 aa22.68■■□□□ 1.22
RAB40C-211ENST00000568586 TRGV3P03979 118 aa22.68■■□□□ 1.22
RAB40C-211ENST00000568586 HSPB1P04792 205 aaKnown RBP22.68■■□□□ 1.22
RAB40C-211ENST00000568586 BRWD1-AS2P59051 145 aa22.68■■□□□ 1.22
RAB40C-211ENST00000568586 ZNF66Q6ZN08 573 aa22.68■■□□□ 1.22
RAB40C-211ENST00000568586 FUNDC2Q9BWH2 189 aa22.68■■□□□ 1.22
RAB40C-211ENST00000568586 MRPS7Q9Y2R9 242 aaKnown RBP22.68■■□□□ 1.22
RAB40C-211ENST00000568586 PTHLHP12272 177 aa22.67■■□□□ 1.22
RAB40C-211ENST00000568586 AADACP22760 399 aa22.67■■□□□ 1.22
RAB40C-211ENST00000568586 FCGR2CP31995 323 aa22.67■■□□□ 1.22
RAB40C-211ENST00000568586 DCTN2Q13561 401 aaKnown RBP22.67■■□□□ 1.22
RAB40C-211ENST00000568586 CDK10Q15131 360 aa22.67■■□□□ 1.22
RAB40C-211ENST00000568586 OR5T1Q8NG75 326 aa22.67■■□□□ 1.22
RAB40C-211ENST00000568586 OR13F1Q8NGS4 319 aa22.67■■□□□ 1.22
RAB40C-211ENST00000568586 DLX4Q92988 240 aaPredicted RBP22.67■■□□□ 1.22
RAB40C-211ENST00000568586 ANAPC10Q9UM13 185 aa22.67■■□□□ 1.22
RAB40C-211ENST00000568586 IGHV4OR15-8A0A075B7B6 117 aa22.66■■□□□ 1.22
RAB40C-211ENST00000568586 A0A087WW49 117 aa22.66■■□□□ 1.22
RAB40C-211ENST00000568586 OVOL1O14753 267 aa22.66■■□□□ 1.22
RAB40C-211ENST00000568586 SAA1P0DJI8 122 aaPredicted RBP22.66■■□□□ 1.22
RAB40C-211ENST00000568586 DEFB121Q5J5C9 76 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms