RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 CD36P16671 472 aa11.31□□□□□ -0.6
FANCA-220ENST00000566409 NFYAP23511 347 aaPredicted RBP11.31□□□□□ -0.6
FANCA-220ENST00000566409 LGALS7P47929 136 aa11.31□□□□□ -0.6
FANCA-220ENST00000566409 SLURP1P55000 103 aa11.31□□□□□ -0.6
FANCA-220ENST00000566409 KCTD21Q4G0X4 260 aa11.31□□□□□ -0.6
FANCA-220ENST00000566409 DLX4Q92988 240 aaPredicted RBP11.31□□□□□ -0.6
FANCA-220ENST00000566409 RHOVQ96L33 236 aa11.31□□□□□ -0.6
FANCA-220ENST00000566409 HARBI1Q96MB7 349 aa11.31□□□□□ -0.6
FANCA-220ENST00000566409 PRR25Q96S07 402 aa11.31□□□□□ -0.6
FANCA-220ENST00000566409 DCSTAMPQ9H295 470 aa11.31□□□□□ -0.6
FANCA-220ENST00000566409 RHBDL2Q9NX52 303 aa11.31□□□□□ -0.6
FANCA-220ENST00000566409 LSM4Q9Y4Z0 139 aaKnown RBP11.31□□□□□ -0.6
FANCA-220ENST00000566409 IGKV1D-13A0A0B4J2D9 117 aa11.3□□□□□ -0.6
FANCA-220ENST00000566409 SHOXO15266 292 aa11.3□□□□□ -0.6
FANCA-220ENST00000566409 HLA-DQB1P01920 261 aa11.3□□□□□ -0.6
FANCA-220ENST00000566409 LGALS1P09382 135 aaKnown RBP11.3□□□□□ -0.6
FANCA-220ENST00000566409 IGKV1-13P0DP09 117 aa11.3□□□□□ -0.6
FANCA-220ENST00000566409 TGFBR1P36897 503 aa11.3□□□□□ -0.6
FANCA-220ENST00000566409 ECI1P42126 302 aa11.3□□□□□ -0.6
FANCA-220ENST00000566409 PYHIN1Q6K0P9 492 aa11.3□□□□□ -0.6
FANCA-220ENST00000566409 OR5T1Q8NG75 326 aa11.3□□□□□ -0.6
FANCA-220ENST00000566409 B9D2Q9BPU9 175 aa11.3□□□□□ -0.6
FANCA-220ENST00000566409 OR2W1Q9Y3N9 320 aa11.3□□□□□ -0.6
FANCA-220ENST00000566409 RBM7Q9Y580 266 aaKnown RBP11.3□□□□□ -0.6
FANCA-220ENST00000566409 LINC01619G3V211 115 aa11.29□□□□□ -0.6
FANCA-220ENST00000566409 CNIH1O95406 144 aa11.29□□□□□ -0.6
FANCA-220ENST00000566409 TRGV3P03979 118 aa11.29□□□□□ -0.6
FANCA-220ENST00000566409 TPPP2P59282 170 aa11.29□□□□□ -0.6
FANCA-220ENST00000566409 RPL30P62888 115 aaKnown RBP11.29□□□□□ -0.6
FANCA-220ENST00000566409 PITPNAQ00169 270 aa11.29□□□□□ -0.6
FANCA-220ENST00000566409 TAGLNQ01995 201 aaKnown RBP11.29□□□□□ -0.6
FANCA-220ENST00000566409 RTL8BQ17RB0 113 aa11.29□□□□□ -0.6
FANCA-220ENST00000566409 IDNKQ5T6J7 187 aa11.29□□□□□ -0.6
FANCA-220ENST00000566409 CNIH2Q6PI25 160 aa11.29□□□□□ -0.6
FANCA-220ENST00000566409 ZMAT5Q9UDW3 170 aaKnown RBP11.29□□□□□ -0.6
FANCA-220ENST00000566409 ANXA10Q9UJ72 324 aa11.29□□□□□ -0.6
FANCA-220ENST00000566409 TRAV18A0A075B6X5 111 aa11.28□□□□□ -0.6
FANCA-220ENST00000566409 OVOL1O14753 267 aa11.28□□□□□ -0.6
FANCA-220ENST00000566409 TUSC2O75896 110 aa11.28□□□□□ -0.6
FANCA-220ENST00000566409 SCGNO76038 276 aa11.28□□□□□ -0.6
FANCA-220ENST00000566409 CRYZL1O95825 349 aa11.28□□□□□ -0.6
FANCA-220ENST00000566409 CTXN2P0C2S0 81 aa11.28□□□□□ -0.6
FANCA-220ENST00000566409 RRASP10301 218 aa11.28□□□□□ -0.6
FANCA-220ENST00000566409 PTHLHP12272 177 aa11.28□□□□□ -0.6
FANCA-220ENST00000566409 BRWD1-AS2P59051 145 aa11.28□□□□□ -0.6
FANCA-220ENST00000566409 GNG2P59768 71 aa11.28□□□□□ -0.6
FANCA-220ENST00000566409 EIF4EBP1Q13541 118 aaPredicted RBP11.28□□□□□ -0.6
FANCA-220ENST00000566409 IDO2Q6ZQW0 420 aa11.28□□□□□ -0.6
FANCA-220ENST00000566409 ZNF645Q8N7E2 425 aa11.28□□□□□ -0.6
FANCA-220ENST00000566409 POC5Q8NA72 575 aa11.28□□□□□ -0.6
FANCA-220ENST00000566409 ADTRPQ96IZ2 230 aa11.28□□□□□ -0.6
FANCA-220ENST00000566409 SLA2Q9H6Q3 261 aa11.28□□□□□ -0.6
FANCA-220ENST00000566409 RBMX2Q9Y388 322 aaKnown RBP11.28□□□□□ -0.6
FANCA-220ENST00000566409 ETV7Q9Y603 341 aa11.28□□□□□ -0.6
FANCA-220ENST00000566409 HUWE1Q7Z6Z7 4374 aaKnown RBP11.28□□□□□ -0.6
FANCA-220ENST00000566409 RBMXL2O75526 392 aaKnown RBP11.27□□□□□ -0.61
FANCA-220ENST00000566409 HSPB1P04792 205 aaKnown RBP11.27□□□□□ -0.61
FANCA-220ENST00000566409 APELAP0DMC3 54 aa11.27□□□□□ -0.61
FANCA-220ENST00000566409 INSL3P51460 131 aa11.27□□□□□ -0.61
FANCA-220ENST00000566409 SCAND1P57086 179 aa11.27□□□□□ -0.61
FANCA-220ENST00000566409 UBE2KP61086 200 aa11.27□□□□□ -0.61
FANCA-220ENST00000566409 CD69Q07108 199 aa11.27□□□□□ -0.61
FANCA-220ENST00000566409 PRSS8Q16651 343 aa11.27□□□□□ -0.61
FANCA-220ENST00000566409 GVQW1Q8N7I0 195 aa11.27□□□□□ -0.61
FANCA-220ENST00000566409 TEX45Q8NA69 505 aa11.27□□□□□ -0.61
FANCA-220ENST00000566409 YIPF6Q96EC8 236 aa11.27□□□□□ -0.61
FANCA-220ENST00000566409 ZNF256Q9Y2P7 627 aaPredicted RBP11.27□□□□□ -0.61
FANCA-220ENST00000566409 MSGN1A6NI15 193 aa11.26□□□□□ -0.61
FANCA-220ENST00000566409 H3BUA1 57 aa11.26□□□□□ -0.61
FANCA-220ENST00000566409 FCGR3BO75015 233 aa11.26□□□□□ -0.61
FANCA-220ENST00000566409 BRI3O95415 125 aa11.26□□□□□ -0.61
FANCA-220ENST00000566409 DEFA5Q01523 94 aa11.26□□□□□ -0.61
FANCA-220ENST00000566409 VAX1Q5SQQ9 334 aa11.26□□□□□ -0.61
FANCA-220ENST00000566409 ACSM6Q6P461 480 aa11.26□□□□□ -0.61
FANCA-220ENST00000566409 OVCH2Q7RTZ1 564 aa11.26□□□□□ -0.61
FANCA-220ENST00000566409 ZNF429Q86V71 674 aa11.26□□□□□ -0.61
FANCA-220ENST00000566409 OSR1Q8TAX0 266 aaPredicted RBP11.26□□□□□ -0.61
FANCA-220ENST00000566409 GPHA2Q96T91 129 aa11.26□□□□□ -0.61
FANCA-220ENST00000566409 AUNIPQ9H7T9 357 aa11.26□□□□□ -0.61
FANCA-220ENST00000566409 ZNF430Q9H8G1 570 aaPredicted RBP11.26□□□□□ -0.61
FANCA-220ENST00000566409 ZNF355PQ9NSJ1 428 aa11.26□□□□□ -0.61
FANCA-220ENST00000566409 SPATA2Q9UM82 520 aa11.26□□□□□ -0.61
FANCA-220ENST00000566409 SAP30O75446 220 aa11.25□□□□□ -0.61
FANCA-220ENST00000566409 SAA1P0DJI8 122 aaPredicted RBP11.25□□□□□ -0.61
FANCA-220ENST00000566409 CD40LGP29965 261 aa11.25□□□□□ -0.61
FANCA-220ENST00000566409 RPS19P39019 145 aaKnown RBP11.25□□□□□ -0.61
FANCA-220ENST00000566409 CBX3Q13185 183 aa11.25□□□□□ -0.61
FANCA-220ENST00000566409 OR2B11Q5JQS5 317 aa11.25□□□□□ -0.61
FANCA-220ENST00000566409 HOGA1Q86XE5 327 aa11.25□□□□□ -0.61
FANCA-220ENST00000566409 BEST4Q8NFU0 473 aa11.25□□□□□ -0.61
FANCA-220ENST00000566409 TMEM68Q96MH6 324 aa11.25□□□□□ -0.61
FANCA-220ENST00000566409 TINAGL1Q9GZM7 467 aaPredicted RBP11.25□□□□□ -0.61
FANCA-220ENST00000566409 A0A0A6YYH2 397 aa11.24□□□□□ -0.61
FANCA-220ENST00000566409 A6NJ64 397 aa11.24□□□□□ -0.61
FANCA-220ENST00000566409 FCER2P06734 321 aa11.24□□□□□ -0.61
FANCA-220ENST00000566409 AADACP22760 399 aa11.24□□□□□ -0.61
FANCA-220ENST00000566409 LSM3P62310 102 aaKnown RBP11.24□□□□□ -0.61
FANCA-220ENST00000566409 DCTN2Q13561 401 aaKnown RBP11.24□□□□□ -0.61
FANCA-220ENST00000566409 DYRK1AQ13627 763 aa11.24□□□□□ -0.61
FANCA-220ENST00000566409 TNXAQ16473 311 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms