RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 SAT2Q96F10 170 aaPredicted RBP13.8□□□□□ -0.2
RAB40C-210ENST00000566290 GPHA2Q96T91 129 aa13.8□□□□□ -0.2
RAB40C-210ENST00000566290 CCL19Q99731 98 aa13.8□□□□□ -0.2
RAB40C-210ENST00000566290 DCAF16Q9NXF7 216 aa13.8□□□□□ -0.2
RAB40C-210ENST00000566290 ST8SIA5O15466 376 aa13.79□□□□□ -0.2
RAB40C-210ENST00000566290 PROP1O75360 226 aa13.79□□□□□ -0.2
RAB40C-210ENST00000566290 HPRT1P00492 218 aa13.79□□□□□ -0.2
RAB40C-210ENST00000566290 SOD3P08294 240 aa13.79□□□□□ -0.2
RAB40C-210ENST00000566290 THBS3P49746 956 aa13.79□□□□□ -0.2
RAB40C-210ENST00000566290 BRWD1-AS2P59051 145 aa13.79□□□□□ -0.2
RAB40C-210ENST00000566290 VAMP2P63027 116 aa13.79□□□□□ -0.2
RAB40C-210ENST00000566290 EWSR1Q01844 656 aaKnown RBP eCLIP13.79□□□□□ -0.28e-7■■■■□ 22.8
RAB40C-210ENST00000566290 TAGLNQ01995 201 aaKnown RBP13.79□□□□□ -0.2
RAB40C-210ENST00000566290 ZNF266Q14584 549 aa13.79□□□□□ -0.2
RAB40C-210ENST00000566290 MIDNQ504T8 468 aa13.79□□□□□ -0.2
RAB40C-210ENST00000566290 PDLIM3Q53GG5 364 aaPredicted RBP13.79□□□□□ -0.2
RAB40C-210ENST00000566290 DUX4L9Q6RFH8 374 aaPredicted RBP13.79□□□□□ -0.2
RAB40C-210ENST00000566290 FOXRED2Q8IWF2 684 aa13.79□□□□□ -0.2
RAB40C-210ENST00000566290 LINC00311Q8N616 119 aa13.79□□□□□ -0.2
RAB40C-210ENST00000566290 DEFB108BQ8NET1 73 aa13.79□□□□□ -0.2
RAB40C-210ENST00000566290 RNASE11Q8TAA1 199 aaKnown RBP13.79□□□□□ -0.2
RAB40C-210ENST00000566290 RNF141Q8WVD5 230 aa13.79□□□□□ -0.2
RAB40C-210ENST00000566290 TCTEX1D2Q8WW35 142 aa13.79□□□□□ -0.2
RAB40C-210ENST00000566290 RAB1BQ9H0U4 201 aa13.79□□□□□ -0.2
RAB40C-210ENST00000566290 BEX4Q9NWD9 120 aaPredicted RBP13.79□□□□□ -0.2
RAB40C-210ENST00000566290 HSPB7Q9UBY9 170 aa13.79□□□□□ -0.2
RAB40C-210ENST00000566290 PRELID3BQ9Y3B1 194 aa13.79□□□□□ -0.2
RAB40C-210ENST00000566290 IGHV3-43A0A0B4J1X8 118 aa13.78□□□□□ -0.2
RAB40C-210ENST00000566290 WRBO00258 174 aa13.78□□□□□ -0.2
RAB40C-210ENST00000566290 SMAD7O15105 426 aaKnown RBP13.78□□□□□ -0.2
RAB40C-210ENST00000566290 MED6O75586 246 aa13.78□□□□□ -0.2
RAB40C-210ENST00000566290 IGHV2-70P01814 119 aa13.78□□□□□ -0.2
RAB40C-210ENST00000566290 SEC11BP0C7V7 166 aa13.78□□□□□ -0.2
RAB40C-210ENST00000566290 DANCRP0C864 163 aa13.78□□□□□ -0.2
RAB40C-210ENST00000566290 IGHV3-43DP0DP04 118 aa13.78□□□□□ -0.2
RAB40C-210ENST00000566290 POLR2GP62487 172 aaKnown RBP eCLIP13.78□□□□□ -0.2
RAB40C-210ENST00000566290 RPL23AP62750 156 aaKnown RBP13.78□□□□□ -0.2
RAB40C-210ENST00000566290 RPL31P62899 125 aaKnown RBP13.78□□□□□ -0.2
RAB40C-210ENST00000566290 POU2AF1Q16633 256 aa13.78□□□□□ -0.2
RAB40C-210ENST00000566290 CXorf66Q5JRM2 361 aaPredicted RBP13.78□□□□□ -0.2
RAB40C-210ENST00000566290 DHRS7BQ6IAN0 325 aaPredicted RBP13.78□□□□□ -0.2
RAB40C-210ENST00000566290 COMMD7Q86VX2 200 aa13.78□□□□□ -0.2
RAB40C-210ENST00000566290 ZCCHC24Q8N2G6 241 aaKnown RBP13.78□□□□□ -0.2
RAB40C-210ENST00000566290 TMEM252Q8N6L7 170 aa13.78□□□□□ -0.2
RAB40C-210ENST00000566290 CCL17Q92583 94 aa13.78□□□□□ -0.2
RAB40C-210ENST00000566290 SMIM8Q96KF7 97 aa13.78□□□□□ -0.2
RAB40C-210ENST00000566290 ZNF714Q96N38 554 aa13.78□□□□□ -0.2
RAB40C-210ENST00000566290 ZNF251Q9BRH9 671 aa13.78□□□□□ -0.2
RAB40C-210ENST00000566290 GINS3Q9BRX5 216 aa13.78□□□□□ -0.2
RAB40C-210ENST00000566290 BARX1Q9HBU1 254 aaPredicted RBP13.78□□□□□ -0.2
RAB40C-210ENST00000566290 ZC4H2Q9NQZ6 224 aa13.78□□□□□ -0.2
RAB40C-210ENST00000566290 CACNG5Q9UF02 275 aa13.78□□□□□ -0.2
RAB40C-210ENST00000566290 PFDN2Q9UHV9 154 aa13.78□□□□□ -0.2
RAB40C-210ENST00000566290 ARFGEF3Q5TH69 2177 aa13.78□□□□□ -0.2
RAB40C-210ENST00000566290 MFSD2BA6NFX1 497 aa13.77□□□□□ -0.21
RAB40C-210ENST00000566290 LINC00473A8K010 186 aa13.77□□□□□ -0.21
RAB40C-210ENST00000566290 C17orf98A8MV24 154 aa13.77□□□□□ -0.21
RAB40C-210ENST00000566290 ARID1AO14497 2285 aa13.77□□□□□ -0.21
RAB40C-210ENST00000566290 SYNGR2O43760 224 aa13.77□□□□□ -0.21
RAB40C-210ENST00000566290 PAX9P55771 341 aa13.77□□□□□ -0.21
RAB40C-210ENST00000566290 TMEM155Q4W5P6 130 aa13.77□□□□□ -0.21
RAB40C-210ENST00000566290 CT45A1Q5HYN5 189 aa13.77□□□□□ -0.21
RAB40C-210ENST00000566290 RPL7L1Q6DKI1 246 aaKnown RBP13.77□□□□□ -0.21
RAB40C-210ENST00000566290 Q6ZRM9 215 aa13.77□□□□□ -0.21
RAB40C-210ENST00000566290 CT45A3Q8NHU0 189 aa13.77□□□□□ -0.21
RAB40C-210ENST00000566290 C8orf46Q8TAG6 207 aa13.77□□□□□ -0.21
RAB40C-210ENST00000566290 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.77□□□□□ -0.21
RAB40C-210ENST00000566290 RNF150Q9ULK6 438 aa13.77□□□□□ -0.21
RAB40C-210ENST00000566290 SONP18583 2426 aaKnown RBP13.76□□□□□ -0.21
RAB40C-210ENST00000566290 KIAA2026Q5HYC2 2103 aa13.76□□□□□ -0.21
RAB40C-210ENST00000566290 SSSCA1O60232 199 aa13.76□□□□□ -0.21
RAB40C-210ENST00000566290 FCN3O75636 299 aa13.76□□□□□ -0.21
RAB40C-210ENST00000566290 S1PR2O95136 353 aa13.76□□□□□ -0.21
RAB40C-210ENST00000566290 ZNF16P17020 682 aaPredicted RBP13.76□□□□□ -0.21
RAB40C-210ENST00000566290 NDUFB7P17568 137 aa13.76□□□□□ -0.21
RAB40C-210ENST00000566290 SULT1A2P50226 295 aa13.76□□□□□ -0.21
RAB40C-210ENST00000566290 ZNF134P52741 427 aa13.76□□□□□ -0.21
RAB40C-210ENST00000566290 ZNF137PP52743 207 aa13.76□□□□□ -0.21
RAB40C-210ENST00000566290 DLX6P56179 175 aa13.76□□□□□ -0.21
RAB40C-210ENST00000566290 ODF3L1Q8IXM7 274 aa13.76□□□□□ -0.21
RAB40C-210ENST00000566290 OR4S2Q8NH73 311 aa13.76□□□□□ -0.21
RAB40C-210ENST00000566290 TNFRSF14Q92956 283 aa13.76□□□□□ -0.21
RAB40C-210ENST00000566290 PERPQ96FX8 193 aa13.76□□□□□ -0.21
RAB40C-210ENST00000566290 CIB3Q96Q77 187 aaPredicted RBP13.76□□□□□ -0.21
RAB40C-210ENST00000566290 PARD6GQ9BYG4 376 aaPredicted RBP13.76□□□□□ -0.21
RAB40C-210ENST00000566290 REG4Q9BYZ8 158 aa13.76□□□□□ -0.21
RAB40C-210ENST00000566290 C19orf12Q9NSK7 152 aa13.76□□□□□ -0.21
RAB40C-210ENST00000566290 CTSZQ9UBR2 303 aa13.76□□□□□ -0.21
RAB40C-210ENST00000566290 USF3Q68DE3 2245 aa13.75□□□□□ -0.21
RAB40C-210ENST00000566290 IGSF23A1L1A6 192 aa13.75□□□□□ -0.21
RAB40C-210ENST00000566290 MARCH11A6NNE9 402 aa13.75□□□□□ -0.21
RAB40C-210ENST00000566290 TXNL1O43396 289 aa13.75□□□□□ -0.21
RAB40C-210ENST00000566290 KCNAB3O43448 404 aa13.75□□□□□ -0.21
RAB40C-210ENST00000566290 RAMP3O60896 148 aa13.75□□□□□ -0.21
RAB40C-210ENST00000566290 DFFBO76075 338 aa13.75□□□□□ -0.21
RAB40C-210ENST00000566290 TMEM50AO95807 157 aa13.75□□□□□ -0.21
RAB40C-210ENST00000566290 FGF2P09038 288 aa13.75□□□□□ -0.21
RAB40C-210ENST00000566290 FAM157CP0CG43 387 aa13.75□□□□□ -0.21
RAB40C-210ENST00000566290 SULT1A1P50225 295 aa13.75□□□□□ -0.21
RAB40C-210ENST00000566290 RAB5CP51148 216 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms