RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 TRIP12Q14669 1992 aaPredicted RBP11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 NPPCP23582 126 aa11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 TSPOP30536 169 aa11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 OR4A47Q6IF82 309 aa11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 HIST1H4GQ99525 98 aa11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 AKIRIN1Q9H9L7 192 aaPredicted RBP11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 TRPM6Q9BX84 2022 aa11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 IGHV3-48P01763 117 aa11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 MT-ND6P03923 174 aa11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 ISG15P05161 165 aa11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 MEF2BQ02080 365 aaPredicted RBP11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 VKORC1L1Q8N0U8 176 aa11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 CLEC7AQ9BXN2 247 aa11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 EIF3GO75821 320 aaKnown RBP eCLIP11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 MBNL2Q5VZF2 373 aaKnown RBP11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 SELENOHQ8IZQ5 122 aaKnown RBP11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 CHRNA10Q9GZZ6 450 aa11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 ZG16O60844 167 aa11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 CD1AP06126 327 aa11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 OTX1P32242 354 aaPredicted RBP11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 CIRBPQ14011 172 aaKnown RBP11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 EEF1AKMT3Q96AZ1 226 aa11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 SRXN1Q9BYN0 137 aa11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 OR51M1Q9H341 326 aa11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 TRIP11Q15643 1979 aa11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 TCF21O43680 179 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 LIPFP07098 398 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 KLK2P20151 261 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 GLIPR1P48060 266 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 PEAR1Q5VY43 1037 aaPredicted RBP11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 TMEM45BQ96B21 275 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 GPR132Q9UNW8 380 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 IGHV3OR16-13A0A075B7E8 117 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 IGHV3-74A0A0B4J1X5 117 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 SYNGR3O43761 229 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 HOXB1P14653 301 aaPredicted RBP11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 RPS20P60866 119 aaKnown RBP11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 MARCH11A6NNE9 402 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 LEPROTL1O95214 131 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 COX6A1P12074 109 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 CXCL2P19875 107 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 HINT1P49773 126 aaPredicted RBP11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 SNRPD3P62318 126 aaKnown RBP11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 SPATA45Q537H7 98 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 DNM1P46Q6ZS02 220 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 LHFPL6Q9Y693 200 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 SBF2Q86WG5 1849 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 COL11A1P12107 1806 aaPredicted RBP11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 ATG2BQ96BY7 2078 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 FAM90A10PA6NDY2 464 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 FAM90A18PA6NE21 464 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 FAM90A16PA6NEW6 464 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 FAM90A20PA6NIJ5 464 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 FAM90A8PA6NJQ4 464 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 FAM90A7PA6NKC0 464 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 FAM90A22PA8MWA6 464 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 FAM90A12PA8MX19 464 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 FAM90A5PA8MXJ8 464 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 FAM90A23PA8MXZ1 464 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 FAM90A15PP0C7V4 464 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 FAM90A13PP0C7W8 464 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 FAM90A14PP0C7W9 464 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 FAM90A24PP0C7X0 464 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 C8orf88P0DMB2 117 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 LIMS1P48059 325 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 MRAP2Q96G30 205 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 NRIP2Q9BQI9 281 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 SFXN3Q9BWM7 321 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 APC2O95996 2303 aa11.66□□□□□ -0.54
CX3CL1-204ENST00000565912 IGLV1-36A0A0B4J1U3 117 aa11.65□□□□□ -0.54
CX3CL1-204ENST00000565912 LINC00862A6NCI5 91 aa11.65□□□□□ -0.54
CX3CL1-204ENST00000565912 NPIPB11E5RHQ5 1161 aa11.65□□□□□ -0.54
CX3CL1-204ENST00000565912 HLA-DQB1P01920 261 aa11.65□□□□□ -0.54
CX3CL1-204ENST00000565912 P2RY4P51582 365 aa11.65□□□□□ -0.54
CX3CL1-204ENST00000565912 HIST1H1AQ02539 215 aaPredicted RBP11.65□□□□□ -0.54
CX3CL1-204ENST00000565912 RELQ04864 619 aaPredicted RBP11.65□□□□□ -0.54
CX3CL1-204ENST00000565912 GCSAMLQ5JQS6 135 aa11.65□□□□□ -0.54
CX3CL1-204ENST00000565912 OR4C13Q8NGP0 309 aa11.65□□□□□ -0.54
CX3CL1-204ENST00000565912 GEMIN7Q9H840 131 aaKnown RBP11.65□□□□□ -0.54
CX3CL1-204ENST00000565912 TRBV5-5A0A0J9YX44 114 aa11.65□□□□□ -0.54
CX3CL1-204ENST00000565912 ARL14EPLP0DKL9 152 aa11.65□□□□□ -0.54
CX3CL1-204ENST00000565912 RAB9AP51151 201 aa11.65□□□□□ -0.54
CX3CL1-204ENST00000565912 SMDT1Q9H4I9 107 aa11.65□□□□□ -0.54
CX3CL1-204ENST00000565912 TRGC2P03986 189 aa11.65□□□□□ -0.54
CX3CL1-204ENST00000565912 OR51G1Q8NGK1 321 aa11.65□□□□□ -0.54
CX3CL1-204ENST00000565912 JPT1Q9UK76 154 aa11.65□□□□□ -0.54
CX3CL1-204ENST00000565912 A1L4Q6 167 aa11.65□□□□□ -0.54
CX3CL1-204ENST00000565912 C17orf51A8MQB3 221 aa11.65□□□□□ -0.54
CX3CL1-204ENST00000565912 OR13C6PQ8NH95 151 aa11.65□□□□□ -0.54
CX3CL1-204ENST00000565912 TUBA4BQ9H853 241 aa11.65□□□□□ -0.54
CX3CL1-204ENST00000565912 AMY1AP04745 511 aa11.65□□□□□ -0.55
CX3CL1-204ENST00000565912 FABP2P12104 132 aa11.65□□□□□ -0.55
CX3CL1-204ENST00000565912 CRYBB3P26998 211 aa11.65□□□□□ -0.55
CX3CL1-204ENST00000565912 TMEM186Q96B77 213 aa11.65□□□□□ -0.55
CX3CL1-204ENST00000565912 TXNDC17Q9BRA2 123 aa11.65□□□□□ -0.55
CX3CL1-204ENST00000565912 MRPL18Q9H0U6 180 aaKnown RBP11.65□□□□□ -0.55
CX3CL1-204ENST00000565912 PSMB11A5LHX3 300 aa11.64□□□□□ -0.55
CX3CL1-204ENST00000565912 GAGE10A6NGK3 116 aa11.64□□□□□ -0.55
CX3CL1-204ENST00000565912 HLA-DQA1P01909 254 aa11.64□□□□□ -0.55
CX3CL1-204ENST00000565912 NINQ8N4C6 2090 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms