RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 SPANXB1Q9NS25 103 aaPredicted RBP1.69□□□□□ -2.14
CHD9-215ENST00000565442 CLASP1Q7Z460 1538 aa1.69□□□□□ -2.14
CHD9-215ENST00000565442 ABCC2Q92887 1545 aa1.69□□□□□ -2.14
CHD9-215ENST00000565442 STRCP1A6NGW2 1772 aa1.69□□□□□ -2.14
CHD9-215ENST00000565442 ZCCHC11Q5TAX3 1644 aaKnown RBP1.69□□□□□ -2.14
CHD9-215ENST00000565442 ADCY10Q96PN6 1610 aa1.69□□□□□ -2.14
CHD9-215ENST00000565442 IQGAP2Q13576 1575 aa1.68□□□□□ -2.14
CHD9-215ENST00000565442 TTC37Q6PGP7 1564 aa1.68□□□□□ -2.14
CHD9-215ENST00000565442 THSD7AQ9UPZ6 1657 aa1.68□□□□□ -2.14
CHD9-215ENST00000565442 TEX50A0A1B0GTY4 177 aa1.68□□□□□ -2.14
CHD9-215ENST00000565442 BTN3A2P78410 334 aa1.68□□□□□ -2.14
CHD9-215ENST00000565442 HLA-DRB3P79483 266 aa1.68□□□□□ -2.14
CHD9-215ENST00000565442 JOSD1Q15040 202 aaPredicted RBP1.68□□□□□ -2.14
CHD9-215ENST00000565442 NAA40Q86UY6 237 aa1.68□□□□□ -2.14
CHD9-215ENST00000565442 MRPS24Q96EL2 167 aaKnown RBP1.68□□□□□ -2.14
CHD9-215ENST00000565442 PACRGQ96M98 296 aaPredicted RBP1.68□□□□□ -2.14
CHD9-215ENST00000565442 KCTD7Q96MP8 289 aa1.68□□□□□ -2.14
CHD9-215ENST00000565442 Q9BRP9 147 aa1.68□□□□□ -2.14
CHD9-215ENST00000565442 PLEKHJ1Q9NW61 149 aa1.68□□□□□ -2.14
CHD9-215ENST00000565442 NDUFB11Q9NX14 153 aa1.68□□□□□ -2.14
CHD9-215ENST00000565442 KDM6BO15054 1643 aa1.68□□□□□ -2.14
CHD9-215ENST00000565442 SHROOM2Q13796 1616 aa1.68□□□□□ -2.14
CHD9-215ENST00000565442 SORL1Q92673 2214 aa1.68□□□□□ -2.14
CHD9-215ENST00000565442 CHD5Q8TDI0 1954 aa1.68□□□□□ -2.14
CHD9-215ENST00000565442 CDC42BPAQ5VT25 1732 aa1.68□□□□□ -2.14
CHD9-215ENST00000565442 GRIN2AQ12879 1464 aa1.68□□□□□ -2.14
CHD9-215ENST00000565442 GAPVD1Q14C86 1478 aa1.68□□□□□ -2.14
CHD9-215ENST00000565442 ARHGAP35Q9NRY4 1499 aa1.68□□□□□ -2.14
CHD9-215ENST00000565442 KIF13AQ9H1H9 1805 aa1.68□□□□□ -2.14
CHD9-215ENST00000565442 ABCA10Q8WWZ4 1543 aa1.67□□□□□ -2.14
CHD9-215ENST00000565442 TMED7-TICAM2A0A0A6YYA0 188 aa1.67□□□□□ -2.14
CHD9-215ENST00000565442 C5orf49A4QMS7 147 aa1.67□□□□□ -2.14
CHD9-215ENST00000565442 CETN3O15182 167 aa1.67□□□□□ -2.14
CHD9-215ENST00000565442 HLA-DQB2P05538 268 aa1.67□□□□□ -2.14
CHD9-215ENST00000565442 PEBP1P30086 187 aaKnown RBP1.67□□□□□ -2.14
CHD9-215ENST00000565442 XCL1P47992 114 aa1.67□□□□□ -2.14
CHD9-215ENST00000565442 TAS2R30P59541 319 aa1.67□□□□□ -2.14
CHD9-215ENST00000565442 SNAP25P60880 206 aa1.67□□□□□ -2.14
CHD9-215ENST00000565442 CXCR4P61073 352 aa1.67□□□□□ -2.14
CHD9-215ENST00000565442 EBPQ15125 230 aaKnown RBP1.67□□□□□ -2.14
CHD9-215ENST00000565442 KRTAP13-4Q3LI77 160 aa1.67□□□□□ -2.14
CHD9-215ENST00000565442 SPATA12Q7Z6I5 190 aa1.67□□□□□ -2.14
CHD9-215ENST00000565442 ZNF283Q8N7M2 679 aa1.67□□□□□ -2.14
CHD9-215ENST00000565442 DCANP1Q8TF63 244 aa1.67□□□□□ -2.14
CHD9-215ENST00000565442 RNASE6Q93091 150 aaKnown RBP1.67□□□□□ -2.14
CHD9-215ENST00000565442 MS4A6EQ96DS6 147 aa1.67□□□□□ -2.14
CHD9-215ENST00000565442 CPNE2Q96FN4 548 aaPredicted RBP1.67□□□□□ -2.14
CHD9-215ENST00000565442 SLC35G5Q96KT7 338 aa1.67□□□□□ -2.14
CHD9-215ENST00000565442 PXDNLA1KZ92 1463 aa1.67□□□□□ -2.14
CHD9-215ENST00000565442 PPRC1Q5VV67 1664 aaKnown RBP1.67□□□□□ -2.14
CHD9-215ENST00000565442 GBF1Q92538 1859 aa1.67□□□□□ -2.14
CHD9-215ENST00000565442 CEP162Q5TB80 1403 aa1.66□□□□□ -2.14
CHD9-215ENST00000565442 DISP1Q96F81 1524 aa1.66□□□□□ -2.14
CHD9-215ENST00000565442 RAPGEF6Q8TEU7 1601 aa1.66□□□□□ -2.14
CHD9-215ENST00000565442 SLX4Q8IY92 1834 aa1.66□□□□□ -2.14
CHD9-215ENST00000565442 C2orf74A8MZ97 194 aa1.66□□□□□ -2.14
CHD9-215ENST00000565442 MT-CO2P00403 227 aa1.66□□□□□ -2.14
CHD9-215ENST00000565442 TPM3P06753 285 aa1.66□□□□□ -2.14
CHD9-215ENST00000565442 ZNF728P0DKX0 622 aa1.66□□□□□ -2.14
CHD9-215ENST00000565442 RPS24P62847 133 aaKnown RBP1.66□□□□□ -2.14
CHD9-215ENST00000565442 PPP1R1AQ13522 171 aa1.66□□□□□ -2.14
CHD9-215ENST00000565442 SAPCD1Q5SSQ6 148 aa1.66□□□□□ -2.14
CHD9-215ENST00000565442 Q6ZS52 159 aa1.66□□□□□ -2.14
CHD9-215ENST00000565442 EEF1AKMT1Q8WVE0 214 aa1.66□□□□□ -2.14
CHD9-215ENST00000565442 C12orf43Q96C57 262 aaKnown RBP1.66□□□□□ -2.14
CHD9-215ENST00000565442 CMTM5Q96DZ9 223 aa1.66□□□□□ -2.14
CHD9-215ENST00000565442 SFRP2Q96HF1 295 aa1.66□□□□□ -2.14
CHD9-215ENST00000565442 DRC3Q9H069 523 aa1.66□□□□□ -2.14
CHD9-215ENST00000565442 HDHD2Q9H0R4 259 aa1.66□□□□□ -2.14
CHD9-215ENST00000565442 GOLGA3Q08378 1498 aa1.66□□□□□ -2.14
CHD9-215ENST00000565442 PLB1Q6P1J6 1458 aa1.66□□□□□ -2.14
CHD9-215ENST00000565442 TIAM1Q13009 1591 aa1.66□□□□□ -2.14
CHD9-215ENST00000565442 CROCC2H7BZ55 1655 aa1.66□□□□□ -2.14
CHD9-215ENST00000565442 ERICH3Q5RHP9 1530 aa1.66□□□□□ -2.14
CHD9-215ENST00000565442 ADGBQ8N7X0 1667 aa1.65□□□□□ -2.15
CHD9-215ENST00000565442 IFT140Q96RY7 1462 aa1.65□□□□□ -2.15
CHD9-215ENST00000565442 PRXQ9BXM0 1461 aa1.65□□□□□ -2.15
CHD9-215ENST00000565442 A0A1W2PQD3 144 aa1.65□□□□□ -2.15
CHD9-215ENST00000565442 ARRDC5A6NEK1 342 aa1.65□□□□□ -2.15
CHD9-215ENST00000565442 OR6C6A6NF89 314 aa1.65□□□□□ -2.15
CHD9-215ENST00000565442 ZNF860A6NHJ4 632 aa1.65□□□□□ -2.15
CHD9-215ENST00000565442 J3QQQ9 107 aa1.65□□□□□ -2.15
CHD9-215ENST00000565442 CTBP2P56545 445 aa1.65□□□□□ -2.15
CHD9-215ENST00000565442 RPL26P61254 145 aaKnown RBP1.65□□□□□ -2.15
CHD9-215ENST00000565442 TPM4P67936 248 aa1.65□□□□□ -2.15
CHD9-215ENST00000565442 GNA12Q03113 381 aa1.65□□□□□ -2.15
CHD9-215ENST00000565442 MGAT3Q09327 533 aa1.65□□□□□ -2.15
CHD9-215ENST00000565442 PRDX4Q13162 271 aa1.65□□□□□ -2.15
CHD9-215ENST00000565442 TPRXLQ17RH7 258 aa1.65□□□□□ -2.15
CHD9-215ENST00000565442 CST9Q5W186 159 aa1.65□□□□□ -2.15
CHD9-215ENST00000565442 CLDND2Q8NHS1 167 aa1.65□□□□□ -2.15
CHD9-215ENST00000565442 ANKRD36BP1Q96IX9 119 aa1.65□□□□□ -2.15
CHD9-215ENST00000565442 NMNAT3Q96T66 252 aa1.65□□□□□ -2.15
CHD9-215ENST00000565442 BABAM2Q9NXR7 383 aa1.65□□□□□ -2.15
CHD9-215ENST00000565442 RPL26L1Q9UNX3 145 aaKnown RBP1.65□□□□□ -2.15
CHD9-215ENST00000565442 POLR3HQ9Y535 204 aaPredicted RBP1.65□□□□□ -2.15
CHD9-215ENST00000565442 ATP6V1DQ9Y5K8 247 aa1.65□□□□□ -2.15
CHD9-215ENST00000565442 NCKAP5O14513 1909 aa1.65□□□□□ -2.15
CHD9-215ENST00000565442 HECW1Q76N89 1606 aa1.65□□□□□ -2.15
CHD9-215ENST00000565442 ARHGEF11O15085 1522 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms