RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 TMEM68Q96MH6 324 aa4.94□□□□□ -1.62
TCF4-228ENST00000565393 Q9H521 79 aa4.94□□□□□ -1.62
TCF4-228ENST00000565393 ZMAT4Q9H898 229 aa4.94□□□□□ -1.62
TCF4-228ENST00000565393 COA4Q9NYJ1 87 aa4.94□□□□□ -1.62
TCF4-228ENST00000565393 PEF1Q9UBV8 284 aaKnown RBP4.94□□□□□ -1.62
TCF4-228ENST00000565393 ELF5Q9UKW6 265 aaPredicted RBP4.94□□□□□ -1.62
TCF4-228ENST00000565393 RAB26Q9ULW5 256 aa4.94□□□□□ -1.62
TCF4-228ENST00000565393 SSR3Q9UNL2 185 aa4.94□□□□□ -1.62
TCF4-228ENST00000565393 TRRAPQ9Y4A5 3859 aa4.94□□□□□ -1.62
TCF4-228ENST00000565393 WNK1Q9H4A3 2382 aa4.93□□□□□ -1.62
TCF4-228ENST00000565393 SHISA3A0PJX4 238 aa4.93□□□□□ -1.62
TCF4-228ENST00000565393 NOTOA8MTQ0 251 aa4.93□□□□□ -1.62
TCF4-228ENST00000565393 H3BUA1 57 aa4.93□□□□□ -1.62
TCF4-228ENST00000565393 MFNGO00587 321 aa4.93□□□□□ -1.62
TCF4-228ENST00000565393 MRPS14O60783 128 aaKnown RBP4.93□□□□□ -1.62
TCF4-228ENST00000565393 CRYZL1O95825 349 aa4.93□□□□□ -1.62
TCF4-228ENST00000565393 IGLV2-23P01705 113 aa4.93□□□□□ -1.62
TCF4-228ENST00000565393 CRYGBP07316 175 aa4.93□□□□□ -1.62
TCF4-228ENST00000565393 FRMD6-AS1P0C7T7 363 aa4.93□□□□□ -1.62
TCF4-228ENST00000565393 GALP22466 123 aa4.93□□□□□ -1.62
TCF4-228ENST00000565393 AADACP22760 399 aa4.93□□□□□ -1.62
TCF4-228ENST00000565393 NFYAP23511 347 aaPredicted RBP4.93□□□□□ -1.62
TCF4-228ENST00000565393 DUTP33316 252 aaKnown RBP4.93□□□□□ -1.62
TCF4-228ENST00000565393 ATP5G2Q06055 141 aa4.93□□□□□ -1.62
TCF4-228ENST00000565393 TMEM177Q53S58 311 aa4.93□□□□□ -1.62
TCF4-228ENST00000565393 HACD4Q5VWC8 232 aa4.93□□□□□ -1.62
TCF4-228ENST00000565393 IDO2Q6ZQW0 420 aa4.93□□□□□ -1.62
TCF4-228ENST00000565393 TPRA1Q86W33 373 aa4.93□□□□□ -1.62
TCF4-228ENST00000565393 H1FOOQ8IZA3 346 aaPredicted RBP4.93□□□□□ -1.62
TCF4-228ENST00000565393 SPARTQ8N0X7 666 aa4.93□□□□□ -1.62
TCF4-228ENST00000565393 TEX45Q8NA69 505 aa4.93□□□□□ -1.62
TCF4-228ENST00000565393 SNAPC3Q92966 411 aa4.93□□□□□ -1.62
TCF4-228ENST00000565393 USMG5Q96IX5 58 aa4.93□□□□□ -1.62
TCF4-228ENST00000565393 CABLES2Q9BTV7 478 aa4.93□□□□□ -1.62
TCF4-228ENST00000565393 DCSTAMPQ9H295 470 aa4.93□□□□□ -1.62
TCF4-228ENST00000565393 TXNL4BQ9NX01 149 aaKnown RBP4.93□□□□□ -1.62
TCF4-228ENST00000565393 NDUFB11Q9NX14 153 aa4.93□□□□□ -1.62
TCF4-228ENST00000565393 DAPK2Q9UIK4 370 aa4.93□□□□□ -1.62
TCF4-228ENST00000565393 STUB1Q9UNE7 303 aa4.93□□□□□ -1.62
TCF4-228ENST00000565393 PRELID3BQ9Y3B1 194 aa4.93□□□□□ -1.62
TCF4-228ENST00000565393 RRP15Q9Y3B9 282 aaKnown RBP4.93□□□□□ -1.62
TCF4-228ENST00000565393 DSCAML1Q8TD84 2053 aa4.92□□□□□ -1.62
TCF4-228ENST00000565393 IGKV1D-8A0A087WSZ0 117 aa4.92□□□□□ -1.62
TCF4-228ENST00000565393 TRIM64CA6NLI5 447 aa4.92□□□□□ -1.62
TCF4-228ENST00000565393 LINC00473A8K010 186 aa4.92□□□□□ -1.62
TCF4-228ENST00000565393 H0Y980 276 aa4.92□□□□□ -1.62
TCF4-228ENST00000565393 FCGR3BO75015 233 aa4.92□□□□□ -1.62
TCF4-228ENST00000565393 SLC22A5O76082 557 aa4.92□□□□□ -1.62
TCF4-228ENST00000565393 DIRAS3O95661 229 aa4.92□□□□□ -1.62
TCF4-228ENST00000565393 ATP6V1G2O95670 118 aa4.92□□□□□ -1.62
TCF4-228ENST00000565393 PRH1P02810 166 aa4.92□□□□□ -1.62
TCF4-228ENST00000565393 DTYMKP23919 212 aa4.92□□□□□ -1.62
TCF4-228ENST00000565393 SYNJ2BPP57105 145 aa4.92□□□□□ -1.62
TCF4-228ENST00000565393 GNG2P59768 71 aa4.92□□□□□ -1.62
TCF4-228ENST00000565393 UBE2KP61086 200 aa4.92□□□□□ -1.62
TCF4-228ENST00000565393 DEFA5Q01523 94 aa4.92□□□□□ -1.62
TCF4-228ENST00000565393 MXD1Q05195 221 aa4.92□□□□□ -1.62
TCF4-228ENST00000565393 KLF5Q13887 457 aaPredicted RBP4.92□□□□□ -1.62
TCF4-228ENST00000565393 PRSS8Q16651 343 aa4.92□□□□□ -1.62
TCF4-228ENST00000565393 RPEL1Q2QD12 228 aa4.92□□□□□ -1.62
TCF4-228ENST00000565393 KIAA2026Q5HYC2 2103 aa4.92□□□□□ -1.62
TCF4-228ENST00000565393 OR2B11Q5JQS5 317 aa4.92□□□□□ -1.62
TCF4-228ENST00000565393 UBE2UQ5VVX9 321 aa4.92□□□□□ -1.62
TCF4-228ENST00000565393 SGPP2Q8IWX5 399 aa4.92□□□□□ -1.62
TCF4-228ENST00000565393 ZNF645Q8N7E2 425 aa4.92□□□□□ -1.62
TCF4-228ENST00000565393 OR9G4Q8NGQ1 327 aa4.92□□□□□ -1.62
TCF4-228ENST00000565393 OSR1Q8TAX0 266 aaPredicted RBP4.92□□□□□ -1.62
TCF4-228ENST00000565393 YTHDF1Q9BYJ9 559 aaKnown RBP4.92□□□□□ -1.62
TCF4-228ENST00000565393 TINAGL1Q9GZM7 467 aaPredicted RBP4.92□□□□□ -1.62
TCF4-228ENST00000565393 TUBA4BQ9H853 241 aa4.92□□□□□ -1.62
TCF4-228ENST00000565393 SPATA2Q9UM82 520 aa4.92□□□□□ -1.62
TCF4-228ENST00000565393 OR2W1Q9Y3N9 320 aa4.92□□□□□ -1.62
TCF4-228ENST00000565393 TRAV18A0A075B6X5 111 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 LOC100506127A0A0U1RQW1 187 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 DPPA5A6NC42 116 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 TMEM235A6NFC5 223 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 C3orf84H3BNL1 204 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 CREBL2O60519 120 aaPredicted RBP4.91□□□□□ -1.62
TCF4-228ENST00000565393 SCGNO76038 276 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 IGLV1-51P01701 117 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 HLA-DQB1P01920 261 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 FCER2P06734 321 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 CLEC2LP0C7M8 214 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 OR9G9P0C7N8 305 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 IGHV4-30-4P0DP06 118 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 CD36P16671 472 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 FGF9P31371 208 aaPredicted RBP4.91□□□□□ -1.62
TCF4-228ENST00000565393 SDC2P34741 201 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 ARPC4P59998 168 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 GABARAPL2P60520 117 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 RHOGP84095 191 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 CDK10Q15131 360 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 IDNKQ5T6J7 187 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 ZNF343Q6P1L6 599 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 CNIH2Q6PI25 160 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 Q6ZS49 121 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 KCTD9Q7L273 389 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 GTSCR1Q86UQ5 136 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 NR2C2APQ86WQ0 139 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 VKORC1L1Q8N0U8 176 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms