RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 SLC35D1Q9NTN3 355 aa20.72■□□□□ 0.91
NME3-208ENST00000565379 KCNAB3O43448 404 aa20.71■□□□□ 0.91
NME3-208ENST00000565379 GPR137BO60478 399 aa20.71■□□□□ 0.91
NME3-208ENST00000565379 ABCA11PQ4W5N1 156 aa20.71■□□□□ 0.91
NME3-208ENST00000565379 Q8N6K4 173 aa20.71■□□□□ 0.91
NME3-208ENST00000565379 TCTEX1D1Q8N7M0 179 aa20.71■□□□□ 0.91
NME3-208ENST00000565379 OR4C13Q8NGP0 309 aa20.71■□□□□ 0.91
NME3-208ENST00000565379 LINC00473A8K010 186 aa20.7■□□□□ 0.9
NME3-208ENST00000565379 PGLYRP1O75594 196 aaPredicted RBP20.7■□□□□ 0.9
NME3-208ENST00000565379 UPK1BO75841 260 aa20.7■□□□□ 0.9
NME3-208ENST00000565379 CRYBA1P05813 215 aa20.7■□□□□ 0.9
NME3-208ENST00000565379 CTSDP07339 412 aaPredicted RBP20.7■□□□□ 0.9
NME3-208ENST00000565379 RAG2P55895 527 aa20.7■□□□□ 0.9
NME3-208ENST00000565379 RND3P61587 244 aa20.7■□□□□ 0.9
NME3-208ENST00000565379 CCBE1Q6UXH8 406 aaPredicted RBP20.7■□□□□ 0.9
NME3-208ENST00000565379 POC5Q8NA72 575 aa20.7■□□□□ 0.9
NME3-208ENST00000565379 OR13C8Q8NGS7 320 aa20.7■□□□□ 0.9
NME3-208ENST00000565379 CD300LFQ8TDQ1 290 aa20.7■□□□□ 0.9
NME3-208ENST00000565379 TCTEX1D2Q8WW35 142 aa20.7■□□□□ 0.9
NME3-208ENST00000565379 FLYWCH2Q96CP2 140 aaKnown RBP20.7■□□□□ 0.9
NME3-208ENST00000565379 SLC25A33Q9BSK2 321 aa20.7■□□□□ 0.9
NME3-208ENST00000565379 C14orf166Q9Y224 244 aaKnown RBP20.7■□□□□ 0.9
NME3-208ENST00000565379 CCDC71LQ8N9Z2 235 aa20.69■□□□□ 0.9
NME3-208ENST00000565379 MARCH1Q8TCQ1 289 aa20.69■□□□□ 0.9
NME3-208ENST00000565379 TSC22D3Q99576 134 aa20.69■□□□□ 0.9
NME3-208ENST00000565379 SLC2A9Q9NRM0 540 aa20.69■□□□□ 0.9
NME3-208ENST00000565379 MOB4Q9Y3A3 225 aa20.69■□□□□ 0.9
NME3-208ENST00000565379 VWFP04275 2813 aa20.69■□□□□ 0.9
NME3-208ENST00000565379 FGF16O43320 207 aa20.68■□□□□ 0.9
NME3-208ENST00000565379 TNFSF12O43508 249 aa20.68■□□□□ 0.9
NME3-208ENST00000565379 TMEM219Q86XT9 240 aa20.68■□□□□ 0.9
NME3-208ENST00000565379 OR4S2Q8NH73 311 aa20.68■□□□□ 0.9
NME3-208ENST00000565379 MRGPRFQ96AM1 343 aa20.68■□□□□ 0.9
NME3-208ENST00000565379 NPFFR1Q9GZQ6 430 aa20.68■□□□□ 0.9
NME3-208ENST00000565379 FAM212BQ9NTI7 297 aaPredicted RBP20.68■□□□□ 0.9
NME3-208ENST00000565379 GPR132Q9UNW8 380 aa20.68■□□□□ 0.9
NME3-208ENST00000565379 WNK1Q9H4A3 2382 aa20.67■□□□□ 0.9
NME3-208ENST00000565379 RBFOX2O43251 390 aaKnown RBP eCLIP20.67■□□□□ 0.92e-10■■□□□ 12.7
NME3-208ENST00000565379 LYRM1O43325 122 aa20.67■□□□□ 0.9
NME3-208ENST00000565379 LGALS7P47929 136 aa20.67■□□□□ 0.9
NME3-208ENST00000565379 RPL30P62888 115 aaKnown RBP20.67■□□□□ 0.9
NME3-208ENST00000565379 HNF4GQ14541 408 aa20.67■□□□□ 0.9
NME3-208ENST00000565379 TMEM177Q53S58 311 aa20.67■□□□□ 0.9
NME3-208ENST00000565379 OSR1Q8TAX0 266 aaPredicted RBP20.67■□□□□ 0.9
NME3-208ENST00000565379 TSNAXQ99598 290 aaKnown RBP20.67■□□□□ 0.9
NME3-208ENST00000565379 RANBP3Q9H6Z4 567 aaPredicted RBP20.67■□□□□ 0.9
NME3-208ENST00000565379 LIN7CQ9NUP9 197 aaKnown RBP20.67■□□□□ 0.9
NME3-208ENST00000565379 COPZ2Q9P299 210 aa20.67■□□□□ 0.9
NME3-208ENST00000565379 LINC00854A0A1B0GVQ3 168 aa20.66■□□□□ 0.9
NME3-208ENST00000565379 FCGR3BO75015 233 aa20.66■□□□□ 0.9
NME3-208ENST00000565379 B3GALNT1O75752 331 aa20.66■□□□□ 0.9
NME3-208ENST00000565379 PIGPP57054 158 aa20.66■□□□□ 0.9
NME3-208ENST00000565379 LINC00205P59089 165 aa20.66■□□□□ 0.9
NME3-208ENST00000565379 KRTAP10-3P60369 221 aa20.66■□□□□ 0.9
NME3-208ENST00000565379 RBMS2Q15434 407 aaKnown RBP20.66■□□□□ 0.9
NME3-208ENST00000565379 PHLDA2Q53GA4 152 aa20.66■□□□□ 0.9
NME3-208ENST00000565379 NPBQ8NG41 125 aa20.66■□□□□ 0.9
NME3-208ENST00000565379 WFDC12Q8WWY7 111 aa20.66■□□□□ 0.9
NME3-208ENST00000565379 MMP24Q9Y5R2 645 aa20.66■□□□□ 0.9
NME3-208ENST00000565379 PLA2G10O15496 165 aa20.65■□□□□ 0.9
NME3-208ENST00000565379 SPDEFO95238 335 aa20.65■□□□□ 0.9
NME3-208ENST00000565379 IGKV1-16P04430 117 aa20.65■□□□□ 0.9
NME3-208ENST00000565379 RLN1P04808 185 aa20.65■□□□□ 0.9
NME3-208ENST00000565379 F2RP25116 425 aa20.65■□□□□ 0.9
NME3-208ENST00000565379 RPS16P62249 146 aaKnown RBP20.65■□□□□ 0.9
NME3-208ENST00000565379 ASAH1Q13510 395 aa20.65■□□□□ 0.9
NME3-208ENST00000565379 MZT2BQ6NZ67 158 aa20.65■□□□□ 0.9
NME3-208ENST00000565379 TBC1D26Q86UD7 250 aa20.65■□□□□ 0.9
NME3-208ENST00000565379 OR51H1Q8NH63 302 aa20.65■□□□□ 0.9
NME3-208ENST00000565379 AIFM2Q9BRQ8 373 aa20.65■□□□□ 0.9
NME3-208ENST00000565379 KIAA1456Q9P272 454 aa20.65■□□□□ 0.9
NME3-208ENST00000565379 NCBP2LA6PVI3 153 aaKnown RBP20.64■□□□□ 0.89
NME3-208ENST00000565379 MPPED1O15442 326 aa20.64■□□□□ 0.89
NME3-208ENST00000565379 NBR2O15453 112 aa20.64■□□□□ 0.89
NME3-208ENST00000565379 CHST1O43916 411 aa20.64■□□□□ 0.89
NME3-208ENST00000565379 NDUFA7O95182 113 aa20.64■□□□□ 0.89
NME3-208ENST00000565379 MMDQ15546 238 aa20.64■□□□□ 0.89
NME3-208ENST00000565379 SPAG16Q8N0X2 631 aa20.64■□□□□ 0.89
NME3-208ENST00000565379 PLSCR3Q9NRY6 295 aa20.64■□□□□ 0.89
NME3-208ENST00000565379 SHOXO15266 292 aa20.63■□□□□ 0.89
NME3-208ENST00000565379 CRYZL1O95825 349 aa20.63■□□□□ 0.89
NME3-208ENST00000565379 DEFA1P59665 94 aa20.63■□□□□ 0.89
NME3-208ENST00000565379 DEFA3P59666 94 aa20.63■□□□□ 0.89
NME3-208ENST00000565379 C11orf88Q6PI97 169 aa20.63■□□□□ 0.89
NME3-208ENST00000565379 OR4F5Q8NH21 305 aa20.63■□□□□ 0.89
NME3-208ENST00000565379 HARBI1Q96MB7 349 aa20.63■□□□□ 0.89
NME3-208ENST00000565379 RTBDNQ9BSG5 229 aaPredicted RBP20.63■□□□□ 0.89
NME3-208ENST00000565379 C5orf66Q9H5L9 145 aa20.63■□□□□ 0.89
NME3-208ENST00000565379 NDUFB6O95139 128 aa20.62■□□□□ 0.89
NME3-208ENST00000565379 NDUFA3O95167 84 aa20.62■□□□□ 0.89
NME3-208ENST00000565379 HPRT1P00492 218 aa20.62■□□□□ 0.89
NME3-208ENST00000565379 PI3P19957 117 aa20.62■□□□□ 0.89
NME3-208ENST00000565379 FBLN7Q53RD9 439 aa20.62■□□□□ 0.89
NME3-208ENST00000565379 TREML4Q6UXN2 200 aa20.62■□□□□ 0.89
NME3-208ENST00000565379 C5orf56Q8N8D9 126 aa20.62■□□□□ 0.89
NME3-208ENST00000565379 GPHA2Q96T91 129 aa20.62■□□□□ 0.89
NME3-208ENST00000565379 RASL11BQ9BPW5 248 aa20.62■□□□□ 0.89
NME3-208ENST00000565379 PRSS22Q9GZN4 317 aa20.62■□□□□ 0.89
NME3-208ENST00000565379 BEX1Q9HBH7 125 aa20.62■□□□□ 0.89
NME3-208ENST00000565379 HRASP01112 189 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms