RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 TMEM25Q86YD3 366 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 ZBTB8OSQ8IWT0 167 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 SPICQ8N5J4 248 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 C12orf29Q8N999 325 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 OR8K1Q8NGG5 319 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 OR2Y1Q8NGV0 311 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 OR4K13Q8NH42 304 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 MRAP2Q96G30 205 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 ATP6V1G3Q96LB4 118 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 OLFM3Q96PB7 478 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 MED10Q9BTT4 135 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 CCDC94Q9BW85 323 aaPredicted RBP1.35□□□□□ -2.19
PALB2-203ENST00000565038 SUCNR1Q9BXA5 334 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 ZNF286AQ9HBT8 521 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 MAT2BQ9NZL9 334 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 POMPQ9Y244 141 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 USH1CQ9Y6N9 552 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 URGCP-MRPS24S4R325 110 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 CACNA1EQ15878 2313 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 FASNP49327 2511 aaKnown RBP1.35□□□□□ -2.19
PALB2-203ENST00000565038 LAMA1P25391 3075 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 GBF1Q92538 1859 aa1.35□□□□□ -2.19
PALB2-203ENST00000565038 IGF2RP11717 2491 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 MYH8P13535 1937 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 DMXL2Q8TDJ6 3036 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 CACNA1BQ00975 2339 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 ANK3Q12955 4377 aaKnown RBP1.34□□□□□ -2.19
PALB2-203ENST00000565038 NBEAQ8NFP9 2946 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 VPS37CA5D8V6 355 aaPredicted RBP1.34□□□□□ -2.19
PALB2-203ENST00000565038 ARGFXA6NJG6 315 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 EFCAB9A8MZ26 197 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 RNASEK-C17orf49H0YIS7 233 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 H3BQV1 296 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 PLPP3O14495 311 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 CDIPTO14735 213 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 CRXO43186 299 aaPredicted RBP1.34□□□□□ -2.19
PALB2-203ENST00000565038 TRAPPC3O43617 180 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 PDCD6O75340 191 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 NDUFS6O75380 124 aaKnown RBP1.34□□□□□ -2.19
PALB2-203ENST00000565038 CRTAPO75718 401 aaPredicted RBP1.34□□□□□ -2.19
PALB2-203ENST00000565038 FADS2O95864 444 aaKnown RBP1.34□□□□□ -2.19
PALB2-203ENST00000565038 OPN1SWP03999 348 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 CECR9P0C854 216 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 SLC35E2BP0CK96 405 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 PYCR1P32322 319 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 RCVRNP35243 200 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 SPAM1P38567 509 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 ACTR1BP42025 376 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 KCNJ3P48549 501 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 PSMD7P51665 324 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 RHOAP61586 193 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 PSG4Q00888 419 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 DMTNQ08495 405 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 PMS2P3Q13401 168 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 SYCP1Q15431 976 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 OR4D1Q15615 310 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 GOLGA7BQ2TAP0 167 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 TMEM215Q68D42 235 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 FAM183BPQ6ZVS7 135 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 BOD1L2Q8IYS8 172 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 LINC00301Q8NCQ3 95 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 DEFB124Q8NES8 71 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 OR2V1Q8NHB1 315 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 RNASEH2CQ8TDP1 164 aaKnown RBP1.34□□□□□ -2.19
PALB2-203ENST00000565038 PDCD6IPQ8WUM4 868 aaKnown RBP1.34□□□□□ -2.19
PALB2-203ENST00000565038 PYURFQ96I23 114 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 BIRC8Q96P09 236 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 LLPHQ9BRT6 129 aaKnown RBP1.34□□□□□ -2.19
PALB2-203ENST00000565038 FAAP24Q9BTP7 215 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 DMAC2Q9NW81 257 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 MS4A12Q9NXJ0 267 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 FBXL3Q9UKT7 428 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 SNX10Q9Y5X0 201 aa1.34□□□□□ -2.19
PALB2-203ENST00000565038 MAP1BP46821 2468 aaKnown RBP1.34□□□□□ -2.2
PALB2-203ENST00000565038 SETXQ7Z333 2677 aaKnown RBP1.34□□□□□ -2.2
PALB2-203ENST00000565038 LRRC37A2A6NM11 1700 aa1.34□□□□□ -2.2
PALB2-203ENST00000565038 USP24Q9UPU5 2620 aa1.34□□□□□ -2.2
PALB2-203ENST00000565038 BSNQ9UPA5 3926 aa1.34□□□□□ -2.2
PALB2-203ENST00000565038 MICAL3Q7RTP6 2002 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 KMT2BQ9UMN6 2715 aaPredicted RBP1.33□□□□□ -2.2
PALB2-203ENST00000565038 ATG2BQ96BY7 2078 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 IGHV2-26A0A0B4J1V2 119 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 FAM183AA6NL82 134 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 COCHO43405 550 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 CDK14O94921 469 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 PDYNP01213 254 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 HLA-EP13747 358 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 GABRA1P14867 456 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 AKR1C4P17516 323 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 ATF1P18846 271 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 PVALBP20472 110 aaPredicted RBP1.33□□□□□ -2.2
PALB2-203ENST00000565038 GTF2H1P32780 548 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 HSPA13P48723 471 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 SULT1A2P50226 295 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 PLTPP55058 493 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 MAP3K7CLP57077 242 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 OR10A3P58181 314 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 BAXQ07812 192 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 LAMTOR1Q6IAA8 161 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 GLYATQ6IB77 296 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms