RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 CCL19Q99731 98 aa15.98■□□□□ 0.15
CLN6-205ENST00000564846 WSB1Q9Y6I7 421 aa15.98■□□□□ 0.15
CLN6-205ENST00000564846 C22orf46C9J442 243 aa15.97■□□□□ 0.15
CLN6-205ENST00000564846 TMEM50AO95807 157 aa15.97■□□□□ 0.15
CLN6-205ENST00000564846 IL3RAP26951 378 aa15.97■□□□□ 0.15
CLN6-205ENST00000564846 ZNF137PP52743 207 aa15.97■□□□□ 0.15
CLN6-205ENST00000564846 RPL23AP62750 156 aaKnown RBP15.97■□□□□ 0.15
CLN6-205ENST00000564846 EWSR1Q01844 656 aaKnown RBP eCLIP15.97■□□□□ 0.15
CLN6-205ENST00000564846 TAGLNQ01995 201 aaKnown RBP15.97■□□□□ 0.15
CLN6-205ENST00000564846 RTL8BQ17RB0 113 aa15.97■□□□□ 0.15
CLN6-205ENST00000564846 BAP18Q8IXM2 172 aa15.97■□□□□ 0.15
CLN6-205ENST00000564846 NARFLQ9H6Q4 476 aa15.97■□□□□ 0.15
CLN6-205ENST00000564846 HSPB7Q9UBY9 170 aa15.97■□□□□ 0.15
CLN6-205ENST00000564846 FLNCQ14315 2725 aa15.97■□□□□ 0.15
CLN6-205ENST00000564846 USP9XQ93008 2570 aaPredicted RBP15.97■□□□□ 0.15
CLN6-205ENST00000564846 LOC105371242A0A075B767 164 aa15.96■□□□□ 0.15
CLN6-205ENST00000564846 RPS10-NUDT3A0A1W2PQS6 291 aa15.96■□□□□ 0.15
CLN6-205ENST00000564846 FAM24AA6NFZ4 105 aa15.96■□□□□ 0.15
CLN6-205ENST00000564846 MED6O75586 246 aa15.96■□□□□ 0.15
CLN6-205ENST00000564846 JTBO76095 146 aa15.96■□□□□ 0.15
CLN6-205ENST00000564846 GAPDHP04406 335 aaKnown RBP15.96■□□□□ 0.15
CLN6-205ENST00000564846 PAX9P55771 341 aa15.96■□□□□ 0.15
CLN6-205ENST00000564846 TNFRSF9Q07011 255 aa15.96■□□□□ 0.15
CLN6-205ENST00000564846 DHRS7BQ6IAN0 325 aaPredicted RBP15.96■□□□□ 0.15
CLN6-205ENST00000564846 TMEM252Q8N6L7 170 aa15.96■□□□□ 0.15
CLN6-205ENST00000564846 CRYZL1O95825 349 aa15.95■□□□□ 0.14
CLN6-205ENST00000564846 PRRX1P54821 245 aa15.95■□□□□ 0.14
CLN6-205ENST00000564846 TAS2R30P59541 319 aa15.95■□□□□ 0.14
CLN6-205ENST00000564846 UBE2KP61086 200 aa15.95■□□□□ 0.14
CLN6-205ENST00000564846 BAXQ07812 192 aa15.95■□□□□ 0.14
CLN6-205ENST00000564846 ST6GALNAC6Q969X2 333 aa15.95■□□□□ 0.14
CLN6-205ENST00000564846 MYO18BQ8IUG5 2567 aa15.95■□□□□ 0.14
CLN6-205ENST00000564846 MALRD1Q5VYJ5 2156 aa15.95■□□□□ 0.14
CLN6-205ENST00000564846 IGHV2-26A0A0B4J1V2 119 aa15.95■□□□□ 0.14
CLN6-205ENST00000564846 RRASP10301 218 aa15.95■□□□□ 0.14
CLN6-205ENST00000564846 ZNF525Q8N782 197 aa15.95■□□□□ 0.14
CLN6-205ENST00000564846 SMIM8Q96KF7 97 aa15.95■□□□□ 0.14
CLN6-205ENST00000564846 SLC35D1Q9NTN3 355 aa15.95■□□□□ 0.14
CLN6-205ENST00000564846 ONECUT1Q9UBC0 465 aa15.95■□□□□ 0.14
CLN6-205ENST00000564846 IGSF23A1L1A6 192 aa15.94■□□□□ 0.14
CLN6-205ENST00000564846 HRASP01112 189 aa15.94■□□□□ 0.14
CLN6-205ENST00000564846 IGHV4-39P01824 125 aa15.94■□□□□ 0.14
CLN6-205ENST00000564846 APOA2P02652 100 aa15.94■□□□□ 0.14
CLN6-205ENST00000564846 COX6B1P14854 86 aa15.94■□□□□ 0.14
CLN6-205ENST00000564846 NHLH2Q02577 135 aa15.94■□□□□ 0.14
CLN6-205ENST00000564846 RPL7L1Q6DKI1 246 aaKnown RBP15.94■□□□□ 0.14
CLN6-205ENST00000564846 CLEC7AQ9BXN2 247 aa15.94■□□□□ 0.14
CLN6-205ENST00000564846 MRPL20Q9BYC9 149 aaKnown RBP15.94■□□□□ 0.14
CLN6-205ENST00000564846 SMIM3Q9BZL3 60 aa15.94■□□□□ 0.14
CLN6-205ENST00000564846 CACFD1Q9UGQ2 172 aa15.94■□□□□ 0.14
CLN6-205ENST00000564846 M0R1W7 72 aa15.93■□□□□ 0.14
CLN6-205ENST00000564846 RBMXL2O75526 392 aaKnown RBP15.93■□□□□ 0.14
CLN6-205ENST00000564846 IGHV2-5P01817 119 aa15.93■□□□□ 0.14
CLN6-205ENST00000564846 PDLIM4P50479 330 aa15.93■□□□□ 0.14
CLN6-205ENST00000564846 POU2AF1Q16633 256 aa15.93■□□□□ 0.14
CLN6-205ENST00000564846 AARDQ4LEZ3 155 aa15.93■□□□□ 0.14
CLN6-205ENST00000564846 UBAC2Q8NBM4 344 aa15.93■□□□□ 0.14
CLN6-205ENST00000564846 BEND2Q8NDZ0 799 aa15.93■□□□□ 0.14
CLN6-205ENST00000564846 OR5AN1Q8NGI8 311 aa15.93■□□□□ 0.14
CLN6-205ENST00000564846 AIFM2Q9BRQ8 373 aa15.93■□□□□ 0.14
CLN6-205ENST00000564846 SLC25A32Q9H2D1 315 aa15.93■□□□□ 0.14
CLN6-205ENST00000564846 UBR5O95071 2799 aaPredicted RBP15.93■□□□□ 0.14
CLN6-205ENST00000564846 BORCS7-ASMTA0A0B4J1R7 106 aa15.92■□□□□ 0.14
CLN6-205ENST00000564846 TXNL1O43396 289 aa15.92■□□□□ 0.14
CLN6-205ENST00000564846 IGLV1-47P01700 117 aa15.92■□□□□ 0.14
CLN6-205ENST00000564846 OR9G9P0C7N8 305 aa15.92■□□□□ 0.14
CLN6-205ENST00000564846 EIF5AL1Q6IS14 154 aaKnown RBP15.92■□□□□ 0.14
CLN6-205ENST00000564846 CLEC9AQ6UXN8 241 aa15.92■□□□□ 0.14
CLN6-205ENST00000564846 SSX9Q7RTT3 188 aa15.92■□□□□ 0.14
CLN6-205ENST00000564846 ZNF295-AS1Q8N0V1 137 aa15.92■□□□□ 0.14
CLN6-205ENST00000564846 OR4A16Q8NH70 328 aa15.92■□□□□ 0.14
CLN6-205ENST00000564846 BSCL2Q96G97 398 aaPredicted RBP15.92■□□□□ 0.14
CLN6-205ENST00000564846 RHOVQ96L33 236 aa15.92■□□□□ 0.14
CLN6-205ENST00000564846 PCGF1Q9BSM1 259 aa15.92■□□□□ 0.14
CLN6-205ENST00000564846 RBKSQ9H477 322 aa15.92■□□□□ 0.14
CLN6-205ENST00000564846 TMEM140Q9NV12 185 aa15.92■□□□□ 0.14
CLN6-205ENST00000564846 PSENENQ9NZ42 101 aa15.92■□□□□ 0.14
CLN6-205ENST00000564846 DOCK11Q5JSL3 2073 aa15.92■□□□□ 0.14
CLN6-205ENST00000564846 DCHS2Q6V1P9 2916 aa15.92■□□□□ 0.14
CLN6-205ENST00000564846 H0YJW9 148 aa15.92■□□□□ 0.14
CLN6-205ENST00000564846 IAPPP10997 89 aa15.92■□□□□ 0.14
CLN6-205ENST00000564846 HLA-DRB5Q30154 266 aa15.92■□□□□ 0.14
CLN6-205ENST00000564846 SP5Q6BEB4 398 aaPredicted RBP15.92■□□□□ 0.14
CLN6-205ENST00000564846 STX12Q86Y82 276 aa15.92■□□□□ 0.14
CLN6-205ENST00000564846 TGIF2LXQ8IUE1 241 aa15.92■□□□□ 0.14
CLN6-205ENST00000564846 VKORC1L1Q8N0U8 176 aa15.92■□□□□ 0.14
CLN6-205ENST00000564846 BPESC1Q9GZL8 116 aa15.92■□□□□ 0.14
CLN6-205ENST00000564846 LINC00862A6NCI5 91 aa15.91■□□□□ 0.14
CLN6-205ENST00000564846 REG1BP48304 166 aa15.91■□□□□ 0.14
CLN6-205ENST00000564846 OR13D1Q8NGV5 346 aa15.91■□□□□ 0.14
CLN6-205ENST00000564846 OSR1Q8TAX0 266 aaPredicted RBP15.91■□□□□ 0.14
CLN6-205ENST00000564846 NABP2Q9BQ15 211 aa15.91■□□□□ 0.14
CLN6-205ENST00000564846 SPTAN1Q13813 2472 aaKnown RBP15.91■□□□□ 0.14
CLN6-205ENST00000564846 LY86O95711 162 aa15.9■□□□□ 0.14
CLN6-205ENST00000564846 IGKV1-16P04430 117 aa15.9■□□□□ 0.14
CLN6-205ENST00000564846 NMBP08949 121 aa15.9■□□□□ 0.14
CLN6-205ENST00000564846 SULT1A1P50225 295 aa15.9■□□□□ 0.14
CLN6-205ENST00000564846 RELBQ01201 579 aa15.9■□□□□ 0.14
CLN6-205ENST00000564846 OR4A47Q6IF82 309 aa15.9■□□□□ 0.14
CLN6-205ENST00000564846 C1orf122Q6ZSJ8 110 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms