RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 TNFSF12O43508 249 aa12.66□□□□□ -0.38
RAB40C-208ENST00000564703 NDUFA3O95167 84 aa12.66□□□□□ -0.38
RAB40C-208ENST00000564703 SPDEFO95238 335 aa12.66□□□□□ -0.38
RAB40C-208ENST00000564703 CRYZL1O95825 349 aa12.66□□□□□ -0.38
RAB40C-208ENST00000564703 IGLV2-14P01704 120 aa12.66□□□□□ -0.38
RAB40C-208ENST00000564703 AKAIN1P0CW23 69 aa12.66□□□□□ -0.38
RAB40C-208ENST00000564703 GNRHRP30968 328 aa12.66□□□□□ -0.38
RAB40C-208ENST00000564703 KIR2DS2P43631 304 aa12.66□□□□□ -0.38
RAB40C-208ENST00000564703 SLC35B1P78383 322 aa12.66□□□□□ -0.38
RAB40C-208ENST00000564703 PSG5Q15238 335 aa12.66□□□□□ -0.38
RAB40C-208ENST00000564703 TMEM95Q3KNT9 176 aa12.66□□□□□ -0.38
RAB40C-208ENST00000564703 VMA21Q3ZAQ7 101 aa12.66□□□□□ -0.38
RAB40C-208ENST00000564703 TMEM177Q53S58 311 aa12.66□□□□□ -0.38
RAB40C-208ENST00000564703 FOXB2Q5VYV0 432 aa12.66□□□□□ -0.38
RAB40C-208ENST00000564703 ZNF818PQ6ZRF7 136 aa12.66□□□□□ -0.38
RAB40C-208ENST00000564703 OR5AU1Q8NGC0 362 aa12.66□□□□□ -0.38
RAB40C-208ENST00000564703 OSR1Q8TAX0 266 aaPredicted RBP12.66□□□□□ -0.38
RAB40C-208ENST00000564703 CHPT1Q8WUD6 406 aa12.66□□□□□ -0.38
RAB40C-208ENST00000564703 DDB2Q92466 427 aa12.66□□□□□ -0.38
RAB40C-208ENST00000564703 HARBI1Q96MB7 349 aa12.66□□□□□ -0.38
RAB40C-208ENST00000564703 AIFM2Q9BRQ8 373 aa12.66□□□□□ -0.38
RAB40C-208ENST00000564703 TINAGL1Q9GZM7 467 aaPredicted RBP12.66□□□□□ -0.38
RAB40C-208ENST00000564703 A6NHS1 94 aa12.65□□□□□ -0.38
RAB40C-208ENST00000564703 GPR31O00270 319 aa12.65□□□□□ -0.38
RAB40C-208ENST00000564703 SLC25A17O43808 307 aa12.65□□□□□ -0.38
RAB40C-208ENST00000564703 CD74P04233 296 aa12.65□□□□□ -0.38
RAB40C-208ENST00000564703 PGAM2P15259 253 aa12.65□□□□□ -0.38
RAB40C-208ENST00000564703 UCP3P55916 312 aa12.65□□□□□ -0.38
RAB40C-208ENST00000564703 AP3S2P59780 193 aa12.65□□□□□ -0.38
RAB40C-208ENST00000564703 SCGB2B2Q4G0G5 96 aa12.65□□□□□ -0.38
RAB40C-208ENST00000564703 OR2B11Q5JQS5 317 aa12.65□□□□□ -0.38
RAB40C-208ENST00000564703 AADACL3Q5VUY0 350 aa12.65□□□□□ -0.38
RAB40C-208ENST00000564703 CCDC190Q86UF4 302 aa12.65□□□□□ -0.38
RAB40C-208ENST00000564703 Q8N402 240 aa12.65□□□□□ -0.38
RAB40C-208ENST00000564703 OR4S2Q8NH73 311 aa12.65□□□□□ -0.38
RAB40C-208ENST00000564703 TERB2Q8NHR7 220 aa12.65□□□□□ -0.38
RAB40C-208ENST00000564703 CD300LFQ8TDQ1 290 aa12.65□□□□□ -0.38
RAB40C-208ENST00000564703 CLCC1Q96S66 551 aa12.65□□□□□ -0.38
RAB40C-208ENST00000564703 WNT10AQ9GZT5 417 aa12.65□□□□□ -0.38
RAB40C-208ENST00000564703 PSMB11A5LHX3 300 aa12.64□□□□□ -0.39
RAB40C-208ENST00000564703 PGLYRP1O75594 196 aaPredicted RBP12.64□□□□□ -0.39
RAB40C-208ENST00000564703 HLA-DRB1P01911 266 aa12.64□□□□□ -0.39
RAB40C-208ENST00000564703 ETV6P41212 452 aa12.64□□□□□ -0.39
RAB40C-208ENST00000564703 INPP1P49441 399 aa12.64□□□□□ -0.39
RAB40C-208ENST00000564703 RPL30P62888 115 aaKnown RBP12.64□□□□□ -0.39
RAB40C-208ENST00000564703 SRSF4Q08170 494 aaKnown RBP12.64□□□□□ -0.39
RAB40C-208ENST00000564703 SLC38A6Q8IZM9 456 aa12.64□□□□□ -0.39
RAB40C-208ENST00000564703 SPAG16Q8N0X2 631 aa12.64□□□□□ -0.39
RAB40C-208ENST00000564703 OR51H1Q8NH63 302 aa12.64□□□□□ -0.39
RAB40C-208ENST00000564703 ZFAND1Q8TCF1 268 aa12.64□□□□□ -0.39
RAB40C-208ENST00000564703 CITED1Q99966 193 aa12.64□□□□□ -0.39
RAB40C-208ENST00000564703 ANKRD20A5PA0PJZ0 165 aa12.63□□□□□ -0.39
RAB40C-208ENST00000564703 LINC01548A6NM66 108 aa12.63□□□□□ -0.39
RAB40C-208ENST00000564703 FBXO24O75426 580 aa12.63□□□□□ -0.39
RAB40C-208ENST00000564703 CNIH1O95406 144 aa12.63□□□□□ -0.39
RAB40C-208ENST00000564703 HRASP01112 189 aa12.63□□□□□ -0.39
RAB40C-208ENST00000564703 VDAC1P21796 283 aa12.63□□□□□ -0.39
RAB40C-208ENST00000564703 FAUP35544 74 aaKnown RBP12.63□□□□□ -0.39
RAB40C-208ENST00000564703 EIF4EBP1Q13541 118 aaPredicted RBP12.63□□□□□ -0.39
RAB40C-208ENST00000564703 PPP1R27Q86WC6 154 aa12.63□□□□□ -0.39
RAB40C-208ENST00000564703 STPG2Q8N412 459 aa12.63□□□□□ -0.39
RAB40C-208ENST00000564703 TOMM5Q8N4H5 51 aa12.63□□□□□ -0.39
RAB40C-208ENST00000564703 C11orf44Q8N8P7 122 aa12.63□□□□□ -0.39
RAB40C-208ENST00000564703 TEX45Q8NA69 505 aa12.63□□□□□ -0.39
RAB40C-208ENST00000564703 OR4X2Q8NGF9 303 aa12.63□□□□□ -0.39
RAB40C-208ENST00000564703 SGMS2Q8NHU3 365 aa12.63□□□□□ -0.39
RAB40C-208ENST00000564703 ABHD5Q8WTS1 349 aa12.63□□□□□ -0.39
RAB40C-208ENST00000564703 NOL4LQ96MY1 436 aaPredicted RBP12.63□□□□□ -0.39
RAB40C-208ENST00000564703 GPHA2Q96T91 129 aa12.63□□□□□ -0.39
RAB40C-208ENST00000564703 HSPB9Q9BQS6 159 aa12.63□□□□□ -0.39
RAB40C-208ENST00000564703 OR51J1Q9H342 316 aa12.63□□□□□ -0.39
RAB40C-208ENST00000564703 LINC00527Q9UJ94 153 aa12.63□□□□□ -0.39
RAB40C-208ENST00000564703 ECI1P42126 302 aa12.62□□□□□ -0.39
RAB40C-208ENST00000564703 KRTAP10-3P60369 221 aa12.62□□□□□ -0.39
RAB40C-208ENST00000564703 CX3CL1P78423 397 aa12.62□□□□□ -0.39
RAB40C-208ENST00000564703 TMEM267Q0VDI3 215 aaPredicted RBP12.62□□□□□ -0.39
RAB40C-208ENST00000564703 PHLDA2Q53GA4 152 aa12.62□□□□□ -0.39
RAB40C-208ENST00000564703 ZNF562Q6V9R5 426 aa12.62□□□□□ -0.39
RAB40C-208ENST00000564703 OR4D10Q8NGI6 311 aa12.62□□□□□ -0.39
RAB40C-208ENST00000564703 VSTM2AQ8TAG5 236 aa12.62□□□□□ -0.39
RAB40C-208ENST00000564703 PRRT1Q99946 306 aa12.62□□□□□ -0.39
RAB40C-208ENST00000564703 RSRP1Q9BUV0 290 aa12.62□□□□□ -0.39
RAB40C-208ENST00000564703 MCUBQ9NWR8 336 aa12.62□□□□□ -0.39
RAB40C-208ENST00000564703 SCP2D1Q9UJQ7 156 aa12.62□□□□□ -0.39
RAB40C-208ENST00000564703 V9GYH0 126 aa12.62□□□□□ -0.39
RAB40C-208ENST00000564703 IGHV7-81A0A0B4J1V7 117 aa12.61□□□□□ -0.39
RAB40C-208ENST00000564703 SRRM4A7MD48 611 aaKnown RBP12.61□□□□□ -0.39
RAB40C-208ENST00000564703 FCN1O00602 326 aa12.61□□□□□ -0.39
RAB40C-208ENST00000564703 RBFOX2O43251 390 aaKnown RBP eCLIP12.61□□□□□ -0.39
RAB40C-208ENST00000564703 CREBL2O60519 120 aaPredicted RBP12.61□□□□□ -0.39
RAB40C-208ENST00000564703 ACTL6BO94805 426 aa12.61□□□□□ -0.39
RAB40C-208ENST00000564703 HPRT1P00492 218 aa12.61□□□□□ -0.39
RAB40C-208ENST00000564703 IGLV2-23P01705 113 aa12.61□□□□□ -0.39
RAB40C-208ENST00000564703 RLN1P04808 185 aa12.61□□□□□ -0.39
RAB40C-208ENST00000564703 UBE2KP61086 200 aa12.61□□□□□ -0.39
RAB40C-208ENST00000564703 ZNF45Q02386 682 aa12.61□□□□□ -0.39
RAB40C-208ENST00000564703 ZNF329Q86UD4 541 aa12.61□□□□□ -0.39
RAB40C-208ENST00000564703 COMMD1Q8N668 190 aa12.61□□□□□ -0.39
RAB40C-208ENST00000564703 TCTEX1D1Q8N7M0 179 aa12.61□□□□□ -0.39
RAB40C-208ENST00000564703 GDPD1Q8N9F7 314 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms