RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 DNAJA3Q96EY1 480 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 SDSLQ96GA7 329 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 C9orf85Q96MD7 179 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 TP53RKQ96S44 253 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 CNN2Q99439 309 aaKnown RBP2.81□□□□□ -1.96
CHD9-212ENST00000564641 STACQ99469 402 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 RNF2Q99496 336 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 HIST1H2BNQ99877 126 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 HIST1H2BMQ99879 126 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 HIST1H2BLQ99880 126 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 SLC25A21Q9BQT8 299 aaPredicted RBP2.81□□□□□ -1.96
CHD9-212ENST00000564641 PBDC1Q9BVG4 233 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 PARD6GQ9BYG4 376 aaPredicted RBP2.81□□□□□ -1.96
CHD9-212ENST00000564641 PKIBQ9C010 78 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 CHST6Q9GZX3 395 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 PCBD2Q9H0N5 130 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 SLC35B3Q9H1N7 401 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 ARV1Q9H2C2 271 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 TCEAL2Q9H3H9 227 aaPredicted RBP2.81□□□□□ -1.96
CHD9-212ENST00000564641 SRMSQ9H3Y6 488 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 C1orf198Q9H425 327 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 TMEM38AQ9H6F2 299 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 ISG20L2Q9H9L3 353 aaKnown RBP2.81□□□□□ -1.96
CHD9-212ENST00000564641 CYTL1Q9NRR1 136 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 INPP5EQ9NRR6 644 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 CBLN4Q9NTU7 201 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 EHFQ9NZC4 300 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 SLC23A2Q9UGH3 650 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 SLC17A4Q9Y2C5 497 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 OARD1Q9Y530 152 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 SCN8AQ9UQD0 1980 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 LRRK1Q38SD2 2015 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 ICE1Q9Y2F5 2266 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 CNTRLQ7Z7A1 2325 aa2.81□□□□□ -1.96
CHD9-212ENST00000564641 USP9YO00507 2555 aaPredicted RBP2.81□□□□□ -1.96
CHD9-212ENST00000564641 UBR5O95071 2799 aaPredicted RBP2.81□□□□□ -1.96
CHD9-212ENST00000564641 FLNCQ14315 2725 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 SDK2Q58EX2 2172 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 A0A087WWC5 75 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 IGHV1OR21-1A0A087WYE8 117 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 A0A1B0GTI1 187 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 MGAT4DA6NG13 374 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 ZNF727A8MUV8 499 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 EEF1E1-BLOC1S5C9J1V9 151 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 BHLHE40O14503 412 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 STK16O75716 305 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 OR2J2O76002 312 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 SLC25A14O95258 325 aaPredicted RBP2.8□□□□□ -1.96
CHD9-212ENST00000564641 CSTAP01040 98 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 PPBPP02775 128 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 TRGC2P03986 189 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 RPN2P04844 631 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 IFNA6P05013 189 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 FGF1P05230 155 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 CXCL1P09341 107 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 WNT2P09544 360 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 OR4A8P0C604 315 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 SLC35G6P0C7Q6 338 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 PGA4P0DJD7 388 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 PGA5P0DJD9 388 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 OR13C7P0DN81 318 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 HLA-GP17693 338 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 DTYMKP23919 212 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 MMP11P24347 488 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 HSD11B1P28845 292 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 BRS3P32247 399 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 ACVR1BP36896 505 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 SNCAP37840 140 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 NAA10P41227 235 aaPredicted RBP2.8□□□□□ -1.96
CHD9-212ENST00000564641 NSG1P42857 185 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 PPICP45877 212 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 POLR2HP52434 150 aaKnown RBP2.8□□□□□ -1.96
CHD9-212ENST00000564641 ZNF133P52736 654 aaPredicted RBP2.8□□□□□ -1.96
CHD9-212ENST00000564641 LIM2P55344 173 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 CLDN6P56747 220 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 CLDN12P56749 244 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 RPS23P62266 143 aaKnown RBP2.8□□□□□ -1.96
CHD9-212ENST00000564641 H3F3AP84243 136 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 EWSR1Q01844 656 aaKnown RBP eCLIP2.8□□□□□ -1.96
CHD9-212ENST00000564641 PAX5Q02548 391 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 PAX2Q02962 417 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 SLC10A7Q0GE19 358 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 RAB11BQ15907 218 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 TMEM241Q24JQ0 296 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 SOHLH1Q5JUK2 328 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 LY6G6FQ5SQ64 297 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 PHYHD1Q5SRE7 291 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 FAM27D1Q5T7N8 215 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 REEP3Q6NUK4 255 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 TMEM205Q6UW68 189 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 IGFL2Q6UWQ7 119 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 UNQ9370/PRO34162Q6UXP9 181 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 ZNF620Q6ZNG0 422 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 OOSP2Q86WS3 158 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 C17orf82Q86X59 251 aaPredicted RBP2.8□□□□□ -1.96
CHD9-212ENST00000564641 TMEM183AQ8IXX5 376 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 TMEM229BQ8NBD8 167 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 SUMF2Q8NBJ7 301 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 OR51G2Q8NGK0 314 aa2.8□□□□□ -1.96
CHD9-212ENST00000564641 OR5D13Q8NGL4 314 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms