RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 LIN7CQ9NUP9 197 aaKnown RBP21.63■■□□□ 1.05
SH3GL3-205ENST00000563901 FAM157CP0CG43 387 aa21.62■■□□□ 1.05
SH3GL3-205ENST00000563901 VAMP1P23763 118 aa21.62■■□□□ 1.05
SH3GL3-205ENST00000563901 ZNF585BQ52M93 769 aa21.62■■□□□ 1.05
SH3GL3-205ENST00000563901 TMEM128Q5BJH2 165 aa21.62■■□□□ 1.05
SH3GL3-205ENST00000563901 OR52B4Q8NGK2 314 aa21.62■■□□□ 1.05
SH3GL3-205ENST00000563901 EAF1Q96JC9 268 aaPredicted RBP21.62■■□□□ 1.05
SH3GL3-205ENST00000563901 CNTFRP26992 372 aa21.62■■□□□ 1.05
SH3GL3-205ENST00000563901 MC5RP33032 325 aa21.62■■□□□ 1.05
SH3GL3-205ENST00000563901 DHODHQ02127 395 aa21.62■■□□□ 1.05
SH3GL3-205ENST00000563901 RTL8BQ17RB0 113 aa21.62■■□□□ 1.05
SH3GL3-205ENST00000563901 PDPNQ86YL7 162 aa21.62■■□□□ 1.05
SH3GL3-205ENST00000563901 SGPP2Q8IWX5 399 aa21.62■■□□□ 1.05
SH3GL3-205ENST00000563901 H0Y980 276 aa21.61■■□□□ 1.05
SH3GL3-205ENST00000563901 OR4E1P0C645 316 aa21.61■■□□□ 1.05
SH3GL3-205ENST00000563901 TAS2R31P59538 309 aa21.61■■□□□ 1.05
SH3GL3-205ENST00000563901 SEC22CQ9BRL7 303 aa21.61■■□□□ 1.05
SH3GL3-205ENST00000563901 MARVELD1Q9BSK0 173 aa21.61■■□□□ 1.05
SH3GL3-205ENST00000563901 ESM1Q9NQ30 184 aa21.61■■□□□ 1.05
SH3GL3-205ENST00000563901 INMT-MINDY4F8WBC2 141 aa21.6■■□□□ 1.05
SH3GL3-205ENST00000563901 S1PR2O95136 353 aa21.6■■□□□ 1.05
SH3GL3-205ENST00000563901 FAM106CPP0CH98 169 aa21.6■■□□□ 1.05
SH3GL3-205ENST00000563901 TMEM11P17152 192 aa21.6■■□□□ 1.05
SH3GL3-205ENST00000563901 SCGB2A2Q13296 93 aa21.6■■□□□ 1.05
SH3GL3-205ENST00000563901 AANATQ16613 207 aa21.6■■□□□ 1.05
SH3GL3-205ENST00000563901 C4orf46Q504U0 113 aa21.6■■□□□ 1.05
SH3GL3-205ENST00000563901 OR4S2Q8NH73 311 aa21.6■■□□□ 1.05
SH3GL3-205ENST00000563901 TCF19Q9Y242 345 aa21.6■■□□□ 1.05
SH3GL3-205ENST00000563901 MOSP00540 346 aa21.59■■□□□ 1.05
SH3GL3-205ENST00000563901 LPAR6P43657 344 aa21.59■■□□□ 1.05
SH3GL3-205ENST00000563901 OXA1LQ15070 435 aa21.59■■□□□ 1.05
SH3GL3-205ENST00000563901 RBMS3Q6XE24 437 aaKnown RBP21.59■■□□□ 1.05
SH3GL3-205ENST00000563901 OR2T10Q8NGZ9 312 aa21.59■■□□□ 1.05
SH3GL3-205ENST00000563901 CASTOR1Q8WTX7 329 aa21.59■■□□□ 1.05
SH3GL3-205ENST00000563901 GLYATL2Q8WU03 294 aa21.59■■□□□ 1.05
SH3GL3-205ENST00000563901 FLYWCH2Q96CP2 140 aaKnown RBP21.59■■□□□ 1.05
SH3GL3-205ENST00000563901 HLA-AP01891 365 aaKnown RBP21.58■■□□□ 1.05
SH3GL3-205ENST00000563901 RPA2P15927 270 aa21.58■■□□□ 1.05
SH3GL3-205ENST00000563901 KIR2DS2P43631 304 aa21.58■■□□□ 1.05
SH3GL3-205ENST00000563901 MECP2P51608 486 aaKnown RBP21.58■■□□□ 1.05
SH3GL3-205ENST00000563901 F2RL1P55085 397 aa21.58■■□□□ 1.05
SH3GL3-205ENST00000563901 DHRS2Q13268 280 aa21.58■■□□□ 1.05
SH3GL3-205ENST00000563901 EBI3Q14213 229 aa21.58■■□□□ 1.05
SH3GL3-205ENST00000563901 TRIM16LQ309B1 348 aa21.58■■□□□ 1.05
SH3GL3-205ENST00000563901 VKORC1L1Q8N0U8 176 aa21.58■■□□□ 1.05
SH3GL3-205ENST00000563901 Q8N6K4 173 aa21.58■■□□□ 1.05
SH3GL3-205ENST00000563901 LHFPL5Q8TAF8 219 aa21.58■■□□□ 1.05
SH3GL3-205ENST00000563901 SSMEM1Q8WWF3 244 aa21.58■■□□□ 1.05
SH3GL3-205ENST00000563901 A6NDX4 124 aa21.58■■□□□ 1.04
SH3GL3-205ENST00000563901 DNAJC9-AS1A6NH13 148 aa21.58■■□□□ 1.04
SH3GL3-205ENST00000563901 SRRM4A7MD48 611 aaKnown RBP21.58■■□□□ 1.04
SH3GL3-205ENST00000563901 SFT2D2O95562 160 aa21.58■■□□□ 1.04
SH3GL3-205ENST00000563901 IGKV1-39P01597 117 aa21.58■■□□□ 1.04
SH3GL3-205ENST00000563901 IGKV1D-39P04432 117 aa21.58■■□□□ 1.04
SH3GL3-205ENST00000563901 RPS16P62249 146 aaKnown RBP21.58■■□□□ 1.04
SH3GL3-205ENST00000563901 TAGLNQ01995 201 aaKnown RBP21.58■■□□□ 1.04
SH3GL3-205ENST00000563901 TMEM187Q14656 261 aa21.58■■□□□ 1.04
SH3GL3-205ENST00000563901 THNSL2Q86YJ6 484 aa21.58■■□□□ 1.04
SH3GL3-205ENST00000563901 GALNT14Q96FL9 552 aa21.58■■□□□ 1.04
SH3GL3-205ENST00000563901 HARBI1Q96MB7 349 aa21.58■■□□□ 1.04
SH3GL3-205ENST00000563901 C9orf170A2RU37 121 aa21.57■■□□□ 1.04
SH3GL3-205ENST00000563901 SHOXO15266 292 aa21.57■■□□□ 1.04
SH3GL3-205ENST00000563901 IFNA2P01563 188 aa21.57■■□□□ 1.04
SH3GL3-205ENST00000563901 RRASP10301 218 aa21.57■■□□□ 1.04
SH3GL3-205ENST00000563901 UCP1P25874 307 aa21.57■■□□□ 1.04
SH3GL3-205ENST00000563901 ANKRD55Q3KP44 614 aa21.57■■□□□ 1.04
SH3GL3-205ENST00000563901 TMEM177Q53S58 311 aa21.57■■□□□ 1.04
SH3GL3-205ENST00000563901 OR4C13Q8NGP0 309 aa21.57■■□□□ 1.04
SH3GL3-205ENST00000563901 CHIAQ9BZP6 476 aa21.57■■□□□ 1.04
SH3GL3-205ENST00000563901 TMEM222Q9H0R3 208 aa21.57■■□□□ 1.04
SH3GL3-205ENST00000563901 A0A0B4J293 547 aa21.56■■□□□ 1.04
SH3GL3-205ENST00000563901 RBFOX2O43251 390 aaKnown RBP eCLIP21.56■■□□□ 1.04
SH3GL3-205ENST00000563901 CHST1O43916 411 aa21.56■■□□□ 1.04
SH3GL3-205ENST00000563901 SERPINE2P07093 398 aa21.56■■□□□ 1.04
SH3GL3-205ENST00000563901 UBE2MP61081 183 aaKnown RBP21.56■■□□□ 1.04
SH3GL3-205ENST00000563901 CBX3Q13185 183 aa21.56■■□□□ 1.04
SH3GL3-205ENST00000563901 DHRS7BQ6IAN0 325 aaPredicted RBP21.56■■□□□ 1.04
SH3GL3-205ENST00000563901 LYG2Q86SG7 212 aa21.56■■□□□ 1.04
SH3GL3-205ENST00000563901 CHPT1Q8WUD6 406 aa21.56■■□□□ 1.04
SH3GL3-205ENST00000563901 ALX4Q9H161 411 aaPredicted RBP21.56■■□□□ 1.04
SH3GL3-205ENST00000563901 KCNIP3Q9Y2W7 256 aa21.56■■□□□ 1.04
SH3GL3-205ENST00000563901 LIN54Q6MZP7 749 aa21.55■■□□□ 1.04
SH3GL3-205ENST00000563901 SSX9Q7RTT3 188 aa21.55■■□□□ 1.04
SH3GL3-205ENST00000563901 CD300LFQ8TDQ1 290 aa21.55■■□□□ 1.04
SH3GL3-205ENST00000563901 SLC25A33Q9BSK2 321 aa21.55■■□□□ 1.04
SH3GL3-205ENST00000563901 VPREB3Q9UKI3 123 aa21.55■■□□□ 1.04
SH3GL3-205ENST00000563901 BTBD17A6NE02 478 aa21.55■■□□□ 1.04
SH3GL3-205ENST00000563901 HPRT1P00492 218 aa21.55■■□□□ 1.04
SH3GL3-205ENST00000563901 IGLV2-23P01705 113 aa21.55■■□□□ 1.04
SH3GL3-205ENST00000563901 MMDQ15546 238 aa21.55■■□□□ 1.04
SH3GL3-205ENST00000563901 OR5R1Q8NH85 324 aa21.55■■□□□ 1.04
SH3GL3-205ENST00000563901 ZNF418Q8TF45 676 aaPredicted RBP21.55■■□□□ 1.04
SH3GL3-205ENST00000563901 G6PCP35575 357 aa21.54■■□□□ 1.04
SH3GL3-205ENST00000563901 TCTEX1D1Q8N7M0 179 aa21.54■■□□□ 1.04
SH3GL3-205ENST00000563901 PLEKHA2Q9HB19 425 aa21.54■■□□□ 1.04
SH3GL3-205ENST00000563901 PLSCR3Q9NRY6 295 aa21.54■■□□□ 1.04
SH3GL3-205ENST00000563901 NIPBLQ6KC79 2804 aaeCLIP21.53■■□□□ 1.04
SH3GL3-205ENST00000563901 SRSF2Q01130 221 aaKnown RBP21.53■■□□□ 1.04
SH3GL3-205ENST00000563901 LIAT1Q6ZQX7 453 aa21.53■■□□□ 1.04
SH3GL3-205ENST00000563901 OSR1Q8TAX0 266 aaPredicted RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms