RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 ZFP30Q9Y2G7 519 aa10.8□□□□□ -0.68
CCDC187-201ENST00000563590 ACTL6BO94805 426 aa10.8□□□□□ -0.68
CCDC187-201ENST00000563590 LRRC75BQ2VPJ9 315 aa10.8□□□□□ -0.68
CCDC187-201ENST00000563590 ATP1A1-AS1Q5TC04 95 aa10.8□□□□□ -0.68
CCDC187-201ENST00000563590 OR8I2Q8N0Y5 310 aa10.8□□□□□ -0.68
CCDC187-201ENST00000563590 TBL2Q9Y4P3 447 aaKnown RBP10.8□□□□□ -0.68
CCDC187-201ENST00000563590 EML6Q6ZMW3 1958 aa10.8□□□□□ -0.68
CCDC187-201ENST00000563590 DMDP11532 3685 aa10.8□□□□□ -0.68
CCDC187-201ENST00000563590 FXYD3Q14802 87 aa10.8□□□□□ -0.68
CCDC187-201ENST00000563590 HLA-DRB5Q30154 266 aa10.8□□□□□ -0.68
CCDC187-201ENST00000563590 ALKBH6Q3KRA9 238 aa10.8□□□□□ -0.68
CCDC187-201ENST00000563590 ABHD17BQ5VST6 288 aa10.8□□□□□ -0.68
CCDC187-201ENST00000563590 SSMEM1Q8WWF3 244 aa10.8□□□□□ -0.68
CCDC187-201ENST00000563590 MGAQ8IWI9 3026 aa10.79□□□□□ -0.68
CCDC187-201ENST00000563590 AQP7P3A6NL99 342 aa10.79□□□□□ -0.68
CCDC187-201ENST00000563590 M0QZ24 198 aa10.79□□□□□ -0.68
CCDC187-201ENST00000563590 GRPP07492 148 aa10.79□□□□□ -0.68
CCDC187-201ENST00000563590 CA6P23280 308 aa10.79□□□□□ -0.68
CCDC187-201ENST00000563590 ZDHHC16Q969W1 377 aa10.79□□□□□ -0.68
CCDC187-201ENST00000563590 NABP1Q96AH0 204 aa10.79□□□□□ -0.68
CCDC187-201ENST00000563590 BET1LQ9NYM9 111 aa10.79□□□□□ -0.68
CCDC187-201ENST00000563590 LAMTOR2Q9Y2Q5 125 aa10.79□□□□□ -0.68
CCDC187-201ENST00000563590 H0Y980 276 aa10.79□□□□□ -0.68
CCDC187-201ENST00000563590 PTGDSP41222 190 aa10.79□□□□□ -0.68
CCDC187-201ENST00000563590 ATP6V1FQ16864 119 aa10.79□□□□□ -0.68
CCDC187-201ENST00000563590 ABLIM2Q6H8Q1 611 aa10.79□□□□□ -0.68
CCDC187-201ENST00000563590 LCN12Q6JVE5 192 aa10.79□□□□□ -0.68
CCDC187-201ENST00000563590 DHRS13Q6UX07 377 aa10.79□□□□□ -0.68
CCDC187-201ENST00000563590 SAP25Q8TEE9 199 aa10.79□□□□□ -0.68
CCDC187-201ENST00000563590 MBD3L1Q8WWY6 194 aa10.79□□□□□ -0.68
CCDC187-201ENST00000563590 UHRF2Q96PU4 802 aa10.79□□□□□ -0.68
CCDC187-201ENST00000563590 MRPS18CQ9Y3D5 142 aaKnown RBP10.79□□□□□ -0.68
CCDC187-201ENST00000563590 ARL2-SNX15V9GYD0 113 aa10.79□□□□□ -0.68
CCDC187-201ENST00000563590 SAPCD1Q5SSQ6 148 aa10.79□□□□□ -0.68
CCDC187-201ENST00000563590 ZNF114Q8NC26 417 aa10.79□□□□□ -0.68
CCDC187-201ENST00000563590 ZNF738Q8NE65 137 aa10.79□□□□□ -0.68
CCDC187-201ENST00000563590 SFRP2Q96HF1 295 aa10.79□□□□□ -0.68
CCDC187-201ENST00000563590 TMEM250H0YL14 139 aa10.78□□□□□ -0.68
CCDC187-201ENST00000563590 ETV2O00321 342 aaPredicted RBP10.78□□□□□ -0.68
CCDC187-201ENST00000563590 SYNGR1O43759 233 aa10.78□□□□□ -0.68
CCDC187-201ENST00000563590 CEACAM6P40199 344 aa10.78□□□□□ -0.68
CCDC187-201ENST00000563590 HOXA4Q00056 320 aaPredicted RBP10.78□□□□□ -0.68
CCDC187-201ENST00000563590 OR2W1Q9Y3N9 320 aa10.78□□□□□ -0.68
CCDC187-201ENST00000563590 INTS1Q8N201 2190 aaKnown RBP10.78□□□□□ -0.68
CCDC187-201ENST00000563590 KIR2DL5BA0A0G2JN68 375 aa10.78□□□□□ -0.68
CCDC187-201ENST00000563590 KIR2DL5BA0A0G2JPC4 375 aa10.78□□□□□ -0.68
CCDC187-201ENST00000563590 DEGS1O15121 323 aa10.78□□□□□ -0.68
CCDC187-201ENST00000563590 RAC2P15153 192 aa10.78□□□□□ -0.68
CCDC187-201ENST00000563590 ARG2P78540 354 aa10.78□□□□□ -0.68
CCDC187-201ENST00000563590 PRDX4Q13162 271 aa10.78□□□□□ -0.68
CCDC187-201ENST00000563590 SLC25A53Q5H9E4 307 aa10.78□□□□□ -0.68
CCDC187-201ENST00000563590 KIR2DL5AQ8N109 375 aa10.78□□□□□ -0.68
CCDC187-201ENST00000563590 NFAM1Q8NET5 270 aaPredicted RBP10.78□□□□□ -0.68
CCDC187-201ENST00000563590 OR2M3Q8NG83 312 aa10.78□□□□□ -0.68
CCDC187-201ENST00000563590 TRAV1-1A0A0B4J248 108 aa10.78□□□□□ -0.68
CCDC187-201ENST00000563590 C17orf112F2Z3M2 114 aa10.78□□□□□ -0.68
CCDC187-201ENST00000563590 CCL25O15444 150 aa10.78□□□□□ -0.68
CCDC187-201ENST00000563590 ZG16O60844 167 aa10.78□□□□□ -0.68
CCDC187-201ENST00000563590 CELA3AP09093 270 aa10.78□□□□□ -0.68
CCDC187-201ENST00000563590 NINJ1Q92982 152 aa10.78□□□□□ -0.68
CCDC187-201ENST00000563590 UQCR10Q9UDW1 63 aa10.78□□□□□ -0.68
CCDC187-201ENST00000563590 CREBBPQ92793 2442 aa10.77□□□□□ -0.68
CCDC187-201ENST00000563590 NCOR2Q9Y618 2525 aa10.77□□□□□ -0.68
CCDC187-201ENST00000563590 LNP1A1A4G5 178 aa10.77□□□□□ -0.69
CCDC187-201ENST00000563590 SOX8P57073 446 aa10.77□□□□□ -0.69
CCDC187-201ENST00000563590 PAFAH1B2P68402 229 aa10.77□□□□□ -0.69
CCDC187-201ENST00000563590 RPL19P84098 196 aaKnown RBP10.77□□□□□ -0.69
CCDC187-201ENST00000563590 LINC01551Q86U37 167 aa10.77□□□□□ -0.69
CCDC187-201ENST00000563590 OR10D3Q8NH80 312 aa10.77□□□□□ -0.69
CCDC187-201ENST00000563590 C10orf35Q96D05 121 aa10.77□□□□□ -0.69
CCDC187-201ENST00000563590 WNT5BQ9H1J7 359 aa10.77□□□□□ -0.69
CCDC187-201ENST00000563590 HEYLQ9NQ87 328 aaPredicted RBP10.77□□□□□ -0.69
CCDC187-201ENST00000563590 SCO2A0A1W2PP80 73 aa10.77□□□□□ -0.69
CCDC187-201ENST00000563590 DEFB108AA8MXU0 73 aa10.77□□□□□ -0.69
CCDC187-201ENST00000563590 ZIC3O60481 467 aa10.77□□□□□ -0.69
CCDC187-201ENST00000563590 HSBP1O75506 76 aa10.77□□□□□ -0.69
CCDC187-201ENST00000563590 SYNGR4O95473 234 aa10.77□□□□□ -0.69
CCDC187-201ENST00000563590 FGFRL1Q8N441 504 aa10.77□□□□□ -0.69
CCDC187-201ENST00000563590 APOBEC3DQ96AK3 386 aaPredicted RBP10.77□□□□□ -0.69
CCDC187-201ENST00000563590 CHRNA10Q9GZZ6 450 aa10.77□□□□□ -0.69
CCDC187-201ENST00000563590 GPR35Q9HC97 309 aa10.77□□□□□ -0.69
CCDC187-201ENST00000563590 RNF115Q9Y4L5 304 aa10.77□□□□□ -0.69
CCDC187-201ENST00000563590 CTXN2P0C2S0 81 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 CYB561P49447 251 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 FOXG1P55316 489 aaPredicted RBP10.76□□□□□ -0.69
CCDC187-201ENST00000563590 PSG4Q00888 419 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 LDLRAD2Q5SZI1 272 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 TMEM164Q5U3C3 297 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 H2BFWTQ7Z2G1 175 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 HAPLN4Q86UW8 402 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 RFESDQ8TAC1 157 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 TMEM147Q9BVK8 224 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 PLEKHA3Q9HB20 300 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 RAB29O14966 203 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 FRMD6-AS1P0C7T7 363 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 TCTAP57738 103 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 GNB1P62873 340 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 MAJINQ3KP22 176 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 RABEPKQ7Z6M1 372 aa10.76□□□□□ -0.69
CCDC187-201ENST00000563590 OR4B1Q8NGF8 309 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms