RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 TRGV5A0A0B4J1U4 118 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 TRAV8-6A0A0B4J262 113 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 TRAV39A0A0B4J263 110 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 C8orf87E5RJ46 101 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 TSTD3H0UI37 97 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 KCNK2O95069 426 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 PPP1R3DO95685 299 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 CYB5R3P00387 301 aaPredicted RBP3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 IFNA1P01562 189 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 THY1P04216 161 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 COX4I1P13073 169 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 SPNP16150 400 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 MYL12AP19105 171 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 CXCR1P25024 350 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 PRSS3P35030 304 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 NUDT2P50583 147 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 CDK6Q00534 326 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 MS4A2Q01362 244 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 RGNQ15493 299 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 ZNF791Q3KP31 576 aaPredicted RBP3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 SPINK14Q6IE38 97 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 DNM1P46Q6ZS02 220 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 NAA40Q86UY6 237 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 ZFP62Q8NB50 900 aaPredicted RBP3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 ST6GALNAC3Q8NDV1 305 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 OR4P4Q8NGL7 312 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 OR5W2Q8NH69 310 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 TNFAIP8L1Q8WVP5 186 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 CYGBQ8WWM9 190 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 FMC1Q96HJ9 113 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 LINC00477Q96M19 166 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 OR7D2Q96RA2 312 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 C20orf27Q9GZN8 174 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 BCL2L10Q9HD36 194 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 ZNF226Q9NYT6 803 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 POLR1DQ9Y2S0 133 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 SMIM26A0A096LP01 95 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 A0A0G2JMP0 313 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 EFCAB10A6NFE3 127 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 J3QKU1 62 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 GPR31O00270 319 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 FAAHO00519 579 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 CELA2AP08217 269 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 CSF3P09919 207 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 OR12D1P0DN82 309 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 ATF1P18846 271 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 GZMHP20718 246 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 PSMB9P28065 219 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 RCVRNP35243 200 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 LINC01547P58512 204 aaPredicted RBP3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 SLC35A2P78381 396 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 GINS1Q14691 196 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 CDK10Q15131 360 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 ZNF141Q15928 474 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 ZNF684Q5T5D7 378 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 SPATA31B1PQ5VZV4 182 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 GRINAQ7Z429 371 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 FAM220AQ7Z4H9 259 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 CALHM3Q86XJ0 350 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 RNF175Q8N4F7 328 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 KRTCAP2Q8N6L1 136 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 OR2M7Q8NG81 312 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 OR4M2Q8NGB6 313 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 OR1N2Q8NGR9 330 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 OR52P1PQ8NH57 321 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 MFSD8Q8NHS3 518 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 COQ8AQ8NI60 647 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 GEMIN6Q8WXD5 167 aaKnown RBP3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 NEUROG1Q92886 237 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 ZNF524Q96C55 264 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 BTF3L4Q96K17 158 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 SDF2Q99470 211 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 NRTNQ99748 197 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 SUCNR1Q9BXA5 334 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 OCR1Q9BZK8 76 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 TAS2R5Q9NYW4 299 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 IDI2-AS1Q9NZ38 188 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 GSKIPQ9P0R6 139 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 ARMCX1Q9P291 453 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 ZNF629Q9UEG4 869 aaPredicted RBP3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 PKIGQ9Y2B9 76 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 CARHSP1Q9Y2V2 147 aaKnown RBP3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 HDGFL3Q9Y3E1 203 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 PYGO1Q9Y3Y4 419 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 SLC25A15Q9Y619 301 aa3.97□□□□□ -1.77
VPS35P1-201ENST00000563400 IGHV4-30-2A0A087WSY4 118 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 CIB4A0PJX0 185 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 GNGT2O14610 69 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 NDUFS5O43920 106 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 TOMM40O96008 361 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 LINC00614P0C842 121 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 OPRM1P35372 400 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 GZMMP51124 257 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 POLR2HP52434 150 aaKnown RBP3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 CTBP2P56545 445 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 TAS2R46P59540 309 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 CYCSP99999 105 aaKnown RBP3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 TMEM236Q5W0B7 351 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 FBXW9Q5XUX1 488 aa3.96□□□□□ -1.78
VPS35P1-201ENST00000563400 NANOGP8Q6NSW7 305 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms