RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 IMMP2LQ96T52 175 aa10.91□□□□□ -0.66
USB1-207ENST00000563149 OR6C3Q9NZP0 311 aa10.91□□□□□ -0.66
USB1-207ENST00000563149 JPT1Q9UK76 154 aa10.91□□□□□ -0.66
USB1-207ENST00000563149 CHD3Q12873 2000 aaKnown RBP10.91□□□□□ -0.66
USB1-207ENST00000563149 IGHV3-64DA0A0J9YX35 117 aa10.9□□□□□ -0.66
USB1-207ENST00000563149 C11orf94C9JXX5 98 aa10.9□□□□□ -0.66
USB1-207ENST00000563149 TSTD3H0UI37 97 aa10.9□□□□□ -0.66
USB1-207ENST00000563149 HMGB3O15347 200 aaKnown RBP10.9□□□□□ -0.66
USB1-207ENST00000563149 RBFOX2O43251 390 aaKnown RBP eCLIP10.9□□□□□ -0.66
USB1-207ENST00000563149 GCH1P30793 250 aa10.9□□□□□ -0.66
USB1-207ENST00000563149 DUTP33316 252 aaKnown RBP10.9□□□□□ -0.66
USB1-207ENST00000563149 TNFSF10P50591 281 aa10.9□□□□□ -0.66
USB1-207ENST00000563149 LCN2P80188 198 aa10.9□□□□□ -0.66
USB1-207ENST00000563149 FOXF2Q12947 444 aa10.9□□□□□ -0.66
USB1-207ENST00000563149 CR1LQ2VPA4 569 aa10.9□□□□□ -0.66
USB1-207ENST00000563149 PRAMEF6Q5VXH4 476 aa10.9□□□□□ -0.66
USB1-207ENST00000563149 Q6ZR03 302 aa10.9□□□□□ -0.66
USB1-207ENST00000563149 CXorf67Q86X51 503 aaPredicted RBP10.9□□□□□ -0.66
USB1-207ENST00000563149 FAM90A1Q86YD7 464 aa10.9□□□□□ -0.66
USB1-207ENST00000563149 Q8N7P7 452 aa10.9□□□□□ -0.66
USB1-207ENST00000563149 PPP1R35Q8TAP8 253 aa10.9□□□□□ -0.66
USB1-207ENST00000563149 TRIB1Q96RU8 372 aa10.9□□□□□ -0.66
USB1-207ENST00000563149 CHODLQ9H9P2 273 aa10.9□□□□□ -0.66
USB1-207ENST00000563149 KCNIP2Q9NS61 270 aa10.9□□□□□ -0.66
USB1-207ENST00000563149 PSG11Q9UQ72 335 aa10.9□□□□□ -0.66
USB1-207ENST00000563149 CDX4O14627 284 aaPredicted RBP10.9□□□□□ -0.67
USB1-207ENST00000563149 YPEL1O60688 119 aa10.9□□□□□ -0.67
USB1-207ENST00000563149 SP9P0CG40 484 aa10.9□□□□□ -0.67
USB1-207ENST00000563149 SSTR5P35346 364 aa10.9□□□□□ -0.67
USB1-207ENST00000563149 GPX4P36969 197 aaPredicted RBP10.9□□□□□ -0.67
USB1-207ENST00000563149 OPRK1P41145 380 aa10.9□□□□□ -0.67
USB1-207ENST00000563149 KIR2DS2P43631 304 aa10.9□□□□□ -0.67
USB1-207ENST00000563149 GPR12P47775 334 aa10.9□□□□□ -0.67
USB1-207ENST00000563149 PMP22Q01453 160 aa10.9□□□□□ -0.67
USB1-207ENST00000563149 GAMTQ14353 236 aa10.9□□□□□ -0.67
USB1-207ENST00000563149 ACTL10Q5JWF8 245 aa10.9□□□□□ -0.67
USB1-207ENST00000563149 HES3Q5TGS1 186 aa10.9□□□□□ -0.67
USB1-207ENST00000563149 GATAD1Q8WUU5 269 aa10.9□□□□□ -0.67
USB1-207ENST00000563149 S100PBPQ96BU1 408 aa10.9□□□□□ -0.67
USB1-207ENST00000563149 YPEL2Q96QA6 119 aa10.9□□□□□ -0.67
USB1-207ENST00000563149 QTRT1Q9BXR0 403 aaKnown RBP10.9□□□□□ -0.67
USB1-207ENST00000563149 A0A1W2PPV4 95 aa10.89□□□□□ -0.67
USB1-207ENST00000563149 ST8SIA5O15466 376 aa10.89□□□□□ -0.67
USB1-207ENST00000563149 GCGP01275 180 aa10.89□□□□□ -0.67
USB1-207ENST00000563149 IGLV1-44P01699 117 aa10.89□□□□□ -0.67
USB1-207ENST00000563149 OR9G9P0C7N8 305 aa10.89□□□□□ -0.67
USB1-207ENST00000563149 PRDX2P32119 198 aa10.89□□□□□ -0.67
USB1-207ENST00000563149 TMPRSS3P57727 454 aa10.89□□□□□ -0.67
USB1-207ENST00000563149 HNF4GQ14541 408 aa10.89□□□□□ -0.67
USB1-207ENST00000563149 FAM53AQ6NSI3 398 aaPredicted RBP10.89□□□□□ -0.67
USB1-207ENST00000563149 DHRS13Q6UX07 377 aa10.89□□□□□ -0.67
USB1-207ENST00000563149 REC114Q7Z4M0 266 aa10.89□□□□□ -0.67
USB1-207ENST00000563149 GCNT2Q8N0V5 402 aa10.89□□□□□ -0.67
USB1-207ENST00000563149 NECAP1Q8NC96 275 aa10.89□□□□□ -0.67
USB1-207ENST00000563149 PCGF1Q9BSM1 259 aa10.89□□□□□ -0.67
USB1-207ENST00000563149 METRNQ9UJH8 293 aa10.89□□□□□ -0.67
USB1-207ENST00000563149 IGHV3-43A0A0B4J1X8 118 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 XKRY2A2RUG3 117 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 AQP7O14520 342 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 AGFG2O95081 481 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 AMBPP02760 352 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 RD3LP0DJH9 198 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 IGHV3-43DP0DP04 118 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 PAX1P15863 534 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 CD82P27701 267 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 KIR2DL2P43627 348 aaPredicted RBP10.88□□□□□ -0.67
USB1-207ENST00000563149 MORN2Q502X0 79 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 CD177Q8N6Q3 437 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 FAM169BQ8N8A8 192 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 OR4A16Q8NH70 328 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 COLQQ9Y215 455 aaPredicted RBP10.88□□□□□ -0.67
USB1-207ENST00000563149 DNAJC13O75165 2243 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 A0A1W2PPQ1 181 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 MKRN2OSH3BPM6 223 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 ITGB1BP1O14713 200 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 MGST3O14880 152 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 CECR9P0C854 216 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 NPPCP23582 126 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 CFHR2P36980 270 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 NUBP1P53384 320 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 ERVK-16P61578 105 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 TLE1Q04724 770 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 PRAMEF5Q5TYX0 476 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 CNEP1R1Q8N9A8 125 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 LRRC29Q8WV35 223 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 NCOR1P1Q9H4R4 102 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 RAB9BQ9NP90 201 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 PLSCR4Q9NRQ2 329 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 UFSP2Q9NUQ7 469 aa10.88□□□□□ -0.67
USB1-207ENST00000563149 SRRM5B3KS81 715 aa10.87□□□□□ -0.67
USB1-207ENST00000563149 F2RL2O00254 374 aa10.87□□□□□ -0.67
USB1-207ENST00000563149 FCGR3BO75015 233 aa10.87□□□□□ -0.67
USB1-207ENST00000563149 DDTP30046 118 aa10.87□□□□□ -0.67
USB1-207ENST00000563149 VDAC2P45880 294 aaPredicted RBP10.87□□□□□ -0.67
USB1-207ENST00000563149 GNB1P62873 340 aa10.87□□□□□ -0.67
USB1-207ENST00000563149 FOXL1Q12952 345 aa10.87□□□□□ -0.67
USB1-207ENST00000563149 RTP5Q14D33 572 aa10.87□□□□□ -0.67
USB1-207ENST00000563149 LINC01551Q86U37 167 aa10.87□□□□□ -0.67
USB1-207ENST00000563149 RFESDQ8TAC1 157 aa10.87□□□□□ -0.67
USB1-207ENST00000563149 SARAFQ96BY9 339 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms