RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 CRYGBP07316 175 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 BTCP35070 178 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 UCP3P55916 312 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 PROK1P58294 105 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 NDPQ00604 133 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 PJVKQ0ZLH3 352 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 PSG5Q15238 335 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 MMDQ15546 238 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 MSMO1Q15800 293 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 TMEM177Q53S58 311 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 C9orf152Q5JTZ5 239 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 C16orf82Q7Z2V1 217 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 PDPNQ86YL7 162 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 VKORC1L1Q8N0U8 176 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 GDPD1Q8N9F7 314 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 NPBQ8NG41 125 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 OR4C13Q8NGP0 309 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 OR51H1Q8NH63 302 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 WIPF2Q8TF74 440 aaPredicted RBP7.74□□□□□ -1.17
CLK3-208ENST00000562626 TCTEX1D2Q8WW35 142 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 RANBP3Q9H6Z4 567 aaPredicted RBP7.74□□□□□ -1.17
CLK3-208ENST00000562626 RAB18Q9NP72 206 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 VSIG4Q9Y279 399 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 FBXO7Q9Y3I1 522 aa7.74□□□□□ -1.17
CLK3-208ENST00000562626 CMYA5Q8N3K9 4069 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 CLPSL1A2RUU4 121 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 HAX1O00165 279 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 GPR31O00270 319 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 RRHO14718 337 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 PLA2G10O15496 165 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 FGF16O43320 207 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 SLC25A17O43808 307 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 APOA2P02652 100 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 IFNA6P05013 189 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 MC5RP33032 325 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 COMPP49747 757 aaPredicted RBP7.73□□□□□ -1.17
CLK3-208ENST00000562626 RPS16P62249 146 aaKnown RBP7.73□□□□□ -1.17
CLK3-208ENST00000562626 IFITM3Q01628 133 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 TAGLNQ01995 201 aaKnown RBP7.73□□□□□ -1.17
CLK3-208ENST00000562626 ZNF45Q02386 682 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 MEF2DQ14814 521 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 C5orf64Q2M2E5 130 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 ZNF585BQ52M93 769 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 ZNF57Q68EA5 555 aaPredicted RBP7.73□□□□□ -1.17
CLK3-208ENST00000562626 ZNF66Q6ZN08 573 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 IDO2Q6ZQW0 420 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 TBC1D26Q86UD7 250 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 TOMM5Q8N4H5 51 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 OR4F5Q8NH21 305 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 TERB2Q8NHR7 220 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 WFDC12Q8WWY7 111 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 TMEM230Q96A57 120 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 HARBI1Q96MB7 349 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 NOL4LQ96MY1 436 aaPredicted RBP7.73□□□□□ -1.17
CLK3-208ENST00000562626 HSD17B10Q99714 261 aaKnown RBP7.73□□□□□ -1.17
CLK3-208ENST00000562626 RTBDNQ9BSG5 229 aaPredicted RBP7.73□□□□□ -1.17
CLK3-208ENST00000562626 PRSS22Q9GZN4 317 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 C5orf66Q9H5L9 145 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 SLC2A9Q9NRM0 540 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 MCUBQ9NWR8 336 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 SLC2A8Q9NY64 477 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 RNF114Q9Y508 228 aa7.73□□□□□ -1.17
CLK3-208ENST00000562626 IGHV7-81A0A0B4J1V7 117 aa7.72□□□□□ -1.17
CLK3-208ENST00000562626 DISC1C4P0D8 188 aa7.72□□□□□ -1.17
CLK3-208ENST00000562626 ARPC1BO15143 372 aaKnown RBP7.72□□□□□ -1.17
CLK3-208ENST00000562626 SHOXO15266 292 aa7.72□□□□□ -1.17
CLK3-208ENST00000562626 SLC22A5O76082 557 aa7.72□□□□□ -1.17
CLK3-208ENST00000562626 S1PR2O95136 353 aa7.72□□□□□ -1.17
CLK3-208ENST00000562626 IGKV1-39P01597 117 aa7.72□□□□□ -1.17
CLK3-208ENST00000562626 IGHG2P01859 326 aa7.72□□□□□ -1.17
CLK3-208ENST00000562626 IGKV1D-39P04432 117 aa7.72□□□□□ -1.17
CLK3-208ENST00000562626 MYOD1P15172 320 aa7.72□□□□□ -1.17
CLK3-208ENST00000562626 PGAM2P15259 253 aa7.72□□□□□ -1.17
CLK3-208ENST00000562626 RPA2P15927 270 aa7.72□□□□□ -1.17
CLK3-208ENST00000562626 CD40LGP29965 261 aa7.72□□□□□ -1.17
CLK3-208ENST00000562626 CCR6P51684 374 aa7.72□□□□□ -1.17
CLK3-208ENST00000562626 FOXL1Q12952 345 aa7.72□□□□□ -1.17
CLK3-208ENST00000562626 LINC00299Q6ZSB3 139 aa7.72□□□□□ -1.17
CLK3-208ENST00000562626 SLC38A6Q8IZM9 456 aa7.72□□□□□ -1.17
CLK3-208ENST00000562626 SPAG16Q8N0X2 631 aa7.72□□□□□ -1.17
CLK3-208ENST00000562626 KLHDC1Q8N7A1 406 aa7.72□□□□□ -1.17
CLK3-208ENST00000562626 ZBTB34Q8NCN2 500 aa7.72□□□□□ -1.17
CLK3-208ENST00000562626 ADAD2Q8NCV1 583 aaKnown RBP7.72□□□□□ -1.17
CLK3-208ENST00000562626 FLYWCH2Q96CP2 140 aaKnown RBP7.72□□□□□ -1.17
CLK3-208ENST00000562626 ADTRPQ96IZ2 230 aa7.72□□□□□ -1.17
CLK3-208ENST00000562626 AKR1E2Q96JD6 320 aa7.72□□□□□ -1.17
CLK3-208ENST00000562626 CLCC1Q96S66 551 aa7.72□□□□□ -1.17
CLK3-208ENST00000562626 WNT10AQ9GZT5 417 aa7.72□□□□□ -1.17
CLK3-208ENST00000562626 LIN7CQ9NUP9 197 aaKnown RBP7.72□□□□□ -1.17
CLK3-208ENST00000562626 METTL1Q9UBP6 276 aaKnown RBP7.72□□□□□ -1.17
CLK3-208ENST00000562626 GPR132Q9UNW8 380 aa7.72□□□□□ -1.17
CLK3-208ENST00000562626 MMP24Q9Y5R2 645 aa7.72□□□□□ -1.17
CLK3-208ENST00000562626 WNK1Q9H4A3 2382 aa7.71□□□□□ -1.17
CLK3-208ENST00000562626 TRAV3A0A0B4J244 114 aa7.71□□□□□ -1.18
CLK3-208ENST00000562626 CA2P00918 260 aa7.71□□□□□ -1.18
CLK3-208ENST00000562626 HLA-DRB1P01911 266 aa7.71□□□□□ -1.18
CLK3-208ENST00000562626 CTSDP07339 412 aaPredicted RBP7.71□□□□□ -1.18
CLK3-208ENST00000562626 SAA1P0DJI8 122 aaPredicted RBP7.71□□□□□ -1.18
CLK3-208ENST00000562626 EGR2P11161 476 aaPredicted RBP7.71□□□□□ -1.18
CLK3-208ENST00000562626 VDAC2P45880 294 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms