RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 NFYAP23511 347 aaPredicted RBP4.57□□□□□ -1.68
CDH13-206ENST00000562601 DTYMKP23919 212 aa4.57□□□□□ -1.68
CDH13-206ENST00000562601 ALDH3B2P48448 385 aa4.57□□□□□ -1.68
CDH13-206ENST00000562601 RORCP51449 518 aa4.57□□□□□ -1.68
CDH13-206ENST00000562601 ACTBP60709 375 aa4.57□□□□□ -1.68
CDH13-206ENST00000562601 BLOC1S1P78537 153 aa4.57□□□□□ -1.68
CDH13-206ENST00000562601 KIR2DS1Q14954 304 aa4.57□□□□□ -1.68
CDH13-206ENST00000562601 SPCS2Q15005 226 aa4.57□□□□□ -1.68
CDH13-206ENST00000562601 MMDQ15546 238 aa4.57□□□□□ -1.68
CDH13-206ENST00000562601 PNLIPRP3Q17RR3 467 aa4.57□□□□□ -1.68
CDH13-206ENST00000562601 TCTEX1D4Q5JR98 221 aa4.57□□□□□ -1.68
CDH13-206ENST00000562601 UBE2NLQ5JXB2 153 aa4.57□□□□□ -1.68
CDH13-206ENST00000562601 ANKRD13BQ86YJ7 626 aa4.57□□□□□ -1.68
CDH13-206ENST00000562601 CLVS1Q8IUQ0 354 aaPredicted RBP4.57□□□□□ -1.68
CDH13-206ENST00000562601 CROCCP3Q8IVE0 287 aa4.57□□□□□ -1.68
CDH13-206ENST00000562601 H1FOOQ8IZA3 346 aaPredicted RBP4.57□□□□□ -1.68
CDH13-206ENST00000562601 Q8N9W7 124 aa4.57□□□□□ -1.68
CDH13-206ENST00000562601 ZNF383Q8NA42 475 aa4.57□□□□□ -1.68
CDH13-206ENST00000562601 WIPF2Q8TF74 440 aaPredicted RBP4.57□□□□□ -1.68
CDH13-206ENST00000562601 S100A16Q96FQ6 103 aaKnown RBP4.57□□□□□ -1.68
CDH13-206ENST00000562601 CLCC1Q96S66 551 aa4.57□□□□□ -1.68
CDH13-206ENST00000562601 HSPB9Q9BQS6 159 aa4.57□□□□□ -1.68
CDH13-206ENST00000562601 CABLES2Q9BTV7 478 aa4.57□□□□□ -1.68
CDH13-206ENST00000562601 OR2D2Q9H210 308 aa4.57□□□□□ -1.68
CDH13-206ENST00000562601 DCSTAMPQ9H295 470 aa4.57□□□□□ -1.68
CDH13-206ENST00000562601 AUNIPQ9H7T9 357 aa4.57□□□□□ -1.68
CDH13-206ENST00000562601 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.57□□□□□ -1.68
CDH13-206ENST00000562601 SDHAF2Q9NX18 166 aa4.57□□□□□ -1.68
CDH13-206ENST00000562601 PIPOXQ9P0Z9 390 aa4.57□□□□□ -1.68
CDH13-206ENST00000562601 MRPS7Q9Y2R9 242 aaKnown RBP4.57□□□□□ -1.68
CDH13-206ENST00000562601 NOTCH1P46531 2555 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 IGKV1D-13A0A0B4J2D9 117 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 TCRBV4S1A1TA0A5B7 111 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 PSMB11A5LHX3 300 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 FAM25AB3EWG3 89 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 FAM25CB3EWG5 89 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 FAM25GB3EWG6 89 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 H0YJW9 148 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 FCN1O00602 326 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 ITGB1BP1O14713 200 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 NBR2O15453 112 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 FGF16O43320 207 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 XRCC3O43542 346 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 TUSC2O75896 110 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 GABARAPO95166 117 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 IGKV1-16P04430 117 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 IGKV1-13P0DP09 117 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 TAS2R20P59543 309 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 ARPC4P59998 168 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 RPS16P62249 146 aaKnown RBP4.56□□□□□ -1.68
CDH13-206ENST00000562601 PITPNAQ00169 270 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 ARL6IP1Q15041 203 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 PLGLAQ15195 96 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 SRSF7Q16629 238 aaKnown RBP eCLIP4.56□□□□□ -1.68
CDH13-206ENST00000562601 C2orf68Q2NKX9 166 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 RNASE12Q5GAN4 147 aaKnown RBP4.56□□□□□ -1.68
CDH13-206ENST00000562601 KHDC1LQ5JSQ8 128 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 TMEM69Q5SWH9 247 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 CNIH2Q6PI25 160 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 Q6ZS49 121 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 C18orf65Q6ZTR6 163 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 SLC35E3Q7Z769 313 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 HOGA1Q86XE5 327 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 SNX29P2Q8IUI4 249 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 FAM71E2Q8N5Q1 922 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 ZBTB34Q8NCN2 500 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 BEST4Q8NFU0 473 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 TOLLIPQ9H0E2 274 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 ABCG5Q9H222 651 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 FBXL15Q9H469 300 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 IFT46Q9NQC8 304 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 ZNF107Q9UII5 783 aaPredicted RBP4.56□□□□□ -1.68
CDH13-206ENST00000562601 ANXA10Q9UJ72 324 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 WASHC3Q9Y3C0 194 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 WSB1Q9Y6I7 421 aa4.56□□□□□ -1.68
CDH13-206ENST00000562601 A0A0A6YYH2 397 aa4.55□□□□□ -1.68
CDH13-206ENST00000562601 SMIM31A0A1B0GVY4 71 aa4.55□□□□□ -1.68
CDH13-206ENST00000562601 OR5H14A6NHG9 310 aa4.55□□□□□ -1.68
CDH13-206ENST00000562601 A6NJ64 397 aa4.55□□□□□ -1.68
CDH13-206ENST00000562601 MARCH11A6NNE9 402 aa4.55□□□□□ -1.68
CDH13-206ENST00000562601 LINC00473A8K010 186 aa4.55□□□□□ -1.68
CDH13-206ENST00000562601 TNFSF12O43508 249 aa4.55□□□□□ -1.68
CDH13-206ENST00000562601 IGHG2P01859 326 aa4.55□□□□□ -1.68
CDH13-206ENST00000562601 PMP2P02689 132 aa4.55□□□□□ -1.68
CDH13-206ENST00000562601 ZNF182P17025 639 aaPredicted RBP4.55□□□□□ -1.68
CDH13-206ENST00000562601 AADACP22760 399 aa4.55□□□□□ -1.68
CDH13-206ENST00000562601 FCGR2CP31995 323 aa4.55□□□□□ -1.68
CDH13-206ENST00000562601 SOX6P35712 828 aa4.55□□□□□ -1.68
CDH13-206ENST00000562601 RFX2P48378 723 aa4.55□□□□□ -1.68
CDH13-206ENST00000562601 LUMP51884 338 aaPredicted RBP4.55□□□□□ -1.68
CDH13-206ENST00000562601 PSG5Q15238 335 aa4.55□□□□□ -1.68
CDH13-206ENST00000562601 C5orf64Q2M2E5 130 aa4.55□□□□□ -1.68
CDH13-206ENST00000562601 OR2B11Q5JQS5 317 aa4.55□□□□□ -1.68
CDH13-206ENST00000562601 FAM71F2Q6NXP2 309 aa4.55□□□□□ -1.68
CDH13-206ENST00000562601 MZT2AQ6P582 158 aa4.55□□□□□ -1.68
CDH13-206ENST00000562601 FOXRED2Q8IWF2 684 aa4.55□□□□□ -1.68
CDH13-206ENST00000562601 STPG2Q8N412 459 aa4.55□□□□□ -1.68
CDH13-206ENST00000562601 OR8H1Q8NGG4 311 aa4.55□□□□□ -1.68
CDH13-206ENST00000562601 SECTM1Q8WVN6 248 aa4.55□□□□□ -1.68
CDH13-206ENST00000562601 SNAPC3Q92966 411 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms