RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 KCTD21Q4G0X4 260 aa13.3□□□□□ -0.28
CDC42BPB-208ENST00000561271 OR5H6Q8NGV6 325 aa13.3□□□□□ -0.28
CDC42BPB-208ENST00000561271 DDB2Q92466 427 aa13.3□□□□□ -0.28
CDC42BPB-208ENST00000561271 CENPOQ9BU64 300 aa13.3□□□□□ -0.28
CDC42BPB-208ENST00000561271 ZMAT5Q9UDW3 170 aaKnown RBP13.3□□□□□ -0.28
CDC42BPB-208ENST00000561271 LINC00473A8K010 186 aa13.29□□□□□ -0.28
CDC42BPB-208ENST00000561271 LINC01619G3V211 115 aa13.29□□□□□ -0.28
CDC42BPB-208ENST00000561271 OVOL1O14753 267 aa13.29□□□□□ -0.28
CDC42BPB-208ENST00000561271 SSX5O60225 188 aa13.29□□□□□ -0.28
CDC42BPB-208ENST00000561271 SCGNO76038 276 aa13.29□□□□□ -0.28
CDC42BPB-208ENST00000561271 CNIH1O95406 144 aa13.29□□□□□ -0.28
CDC42BPB-208ENST00000561271 CRYZL1O95825 349 aa13.29□□□□□ -0.28
CDC42BPB-208ENST00000561271 TRGV3P03979 118 aa13.29□□□□□ -0.28
CDC42BPB-208ENST00000561271 CD36P16671 472 aa13.29□□□□□ -0.28
CDC42BPB-208ENST00000561271 NFYAP23511 347 aaPredicted RBP13.29□□□□□ -0.28
CDC42BPB-208ENST00000561271 DUTP33316 252 aaKnown RBP13.29□□□□□ -0.28
CDC42BPB-208ENST00000561271 TMEM177Q53S58 311 aa13.29□□□□□ -0.28
CDC42BPB-208ENST00000561271 IDNKQ5T6J7 187 aa13.29□□□□□ -0.28
CDC42BPB-208ENST00000561271 DLX4Q92988 240 aaPredicted RBP13.29□□□□□ -0.28
CDC42BPB-208ENST00000561271 SLC25A38Q96DW6 304 aa13.29□□□□□ -0.28
CDC42BPB-208ENST00000561271 B9D2Q9BPU9 175 aa13.29□□□□□ -0.28
CDC42BPB-208ENST00000561271 SRRM4A7MD48 611 aaKnown RBP13.28□□□□□ -0.28
CDC42BPB-208ENST00000561271 LGALS7P47929 136 aa13.28□□□□□ -0.28
CDC42BPB-208ENST00000561271 DEFA5Q01523 94 aa13.28□□□□□ -0.28
CDC42BPB-208ENST00000561271 DCTN2Q13561 401 aaKnown RBP13.28□□□□□ -0.28
CDC42BPB-208ENST00000561271 IDO2Q6ZQW0 420 aa13.28□□□□□ -0.28
CDC42BPB-208ENST00000561271 POC5Q8NA72 575 aa13.28□□□□□ -0.28
CDC42BPB-208ENST00000561271 OR5T1Q8NG75 326 aa13.28□□□□□ -0.28
CDC42BPB-208ENST00000561271 ADTRPQ96IZ2 230 aa13.28□□□□□ -0.28
CDC42BPB-208ENST00000561271 DCSTAMPQ9H295 470 aa13.28□□□□□ -0.28
CDC42BPB-208ENST00000561271 SLA2Q9H6Q3 261 aa13.28□□□□□ -0.28
CDC42BPB-208ENST00000561271 ZNF355PQ9NSJ1 428 aa13.28□□□□□ -0.28
CDC42BPB-208ENST00000561271 ETV7Q9Y603 341 aa13.28□□□□□ -0.28
CDC42BPB-208ENST00000561271 IGKV1D-13A0A0B4J2D9 117 aa13.27□□□□□ -0.29
CDC42BPB-208ENST00000561271 APELAP0DMC3 54 aa13.27□□□□□ -0.29
CDC42BPB-208ENST00000561271 IGKV1-13P0DP09 117 aa13.27□□□□□ -0.29
CDC42BPB-208ENST00000561271 RRASP10301 218 aa13.27□□□□□ -0.29
CDC42BPB-208ENST00000561271 CD40LGP29965 261 aa13.27□□□□□ -0.29
CDC42BPB-208ENST00000561271 PITPNAQ00169 270 aa13.27□□□□□ -0.29
CDC42BPB-208ENST00000561271 TAGLNQ01995 201 aaKnown RBP13.27□□□□□ -0.29
CDC42BPB-208ENST00000561271 MRGPRG-AS1Q2M3A8 158 aa13.27□□□□□ -0.29
CDC42BPB-208ENST00000561271 OR2B11Q5JQS5 317 aa13.27□□□□□ -0.29
CDC42BPB-208ENST00000561271 KCTD9Q7L273 389 aa13.27□□□□□ -0.29
CDC42BPB-208ENST00000561271 ZNF645Q8N7E2 425 aa13.27□□□□□ -0.29
CDC42BPB-208ENST00000561271 ZNF256Q9Y2P7 627 aaPredicted RBP13.27□□□□□ -0.29
CDC42BPB-208ENST00000561271 OR2W1Q9Y3N9 320 aa13.27□□□□□ -0.29
CDC42BPB-208ENST00000561271 SAP30O75446 220 aa13.26□□□□□ -0.29
CDC42BPB-208ENST00000561271 LY86O95711 162 aa13.26□□□□□ -0.29
CDC42BPB-208ENST00000561271 TGFBR1P36897 503 aa13.26□□□□□ -0.29
CDC42BPB-208ENST00000561271 VMA21Q3ZAQ7 101 aa13.26□□□□□ -0.29
CDC42BPB-208ENST00000561271 CNIH2Q6PI25 160 aa13.26□□□□□ -0.29
CDC42BPB-208ENST00000561271 ANXA10Q9UJ72 324 aa13.26□□□□□ -0.29
CDC42BPB-208ENST00000561271 LSM4Q9Y4Z0 139 aaKnown RBP13.26□□□□□ -0.29
CDC42BPB-208ENST00000561271 STAB2Q8WWQ8 2551 aa13.25□□□□□ -0.29
CDC42BPB-208ENST00000561271 TRAV18A0A075B6X5 111 aa13.25□□□□□ -0.29
CDC42BPB-208ENST00000561271 FCGR3BO75015 233 aa13.25□□□□□ -0.29
CDC42BPB-208ENST00000561271 TUSC2O75896 110 aa13.25□□□□□ -0.29
CDC42BPB-208ENST00000561271 HLA-DQB1P01920 261 aa13.25□□□□□ -0.29
CDC42BPB-208ENST00000561271 CTXN2P0C2S0 81 aa13.25□□□□□ -0.29
CDC42BPB-208ENST00000561271 INSL3P51460 131 aa13.25□□□□□ -0.29
CDC42BPB-208ENST00000561271 SCAND1P57086 179 aa13.25□□□□□ -0.29
CDC42BPB-208ENST00000561271 UBE2KP61086 200 aa13.25□□□□□ -0.29
CDC42BPB-208ENST00000561271 TNXAQ16473 311 aa13.25□□□□□ -0.29
CDC42BPB-208ENST00000561271 VAX1Q5SQQ9 334 aa13.25□□□□□ -0.29
CDC42BPB-208ENST00000561271 RHOVQ96L33 236 aa13.25□□□□□ -0.29
CDC42BPB-208ENST00000561271 PHB2Q99623 299 aa13.25□□□□□ -0.29
CDC42BPB-208ENST00000561271 RBMX2Q9Y388 322 aaKnown RBP13.25□□□□□ -0.29
CDC42BPB-208ENST00000561271 H3BUA1 57 aa13.24□□□□□ -0.29
CDC42BPB-208ENST00000561271 IGLV2-14P01704 120 aa13.24□□□□□ -0.29
CDC42BPB-208ENST00000561271 HSPB1P04792 205 aaKnown RBP13.24□□□□□ -0.29
CDC42BPB-208ENST00000561271 FCER2P06734 321 aa13.24□□□□□ -0.29
CDC42BPB-208ENST00000561271 SAA1P0DJI8 122 aaPredicted RBP13.24□□□□□ -0.29
CDC42BPB-208ENST00000561271 PTHLHP12272 177 aa13.24□□□□□ -0.29
CDC42BPB-208ENST00000561271 RPL30P62888 115 aaKnown RBP13.24□□□□□ -0.29
CDC42BPB-208ENST00000561271 PRSS8Q16651 343 aa13.24□□□□□ -0.29
CDC42BPB-208ENST00000561271 ZNF429Q86V71 674 aa13.24□□□□□ -0.29
CDC42BPB-208ENST00000561271 GVQW1Q8N7I0 195 aa13.24□□□□□ -0.29
CDC42BPB-208ENST00000561271 OSR1Q8TAX0 266 aaPredicted RBP13.24□□□□□ -0.29
CDC42BPB-208ENST00000561271 SRSF12Q8WXF0 261 aaKnown RBP13.24□□□□□ -0.29
CDC42BPB-208ENST00000561271 ACOT12Q8WYK0 555 aa13.24□□□□□ -0.29
CDC42BPB-208ENST00000561271 COA4Q9NYJ1 87 aa13.24□□□□□ -0.29
CDC42BPB-208ENST00000561271 C13orf42A0A1B0GVH6 325 aa13.23□□□□□ -0.29
CDC42BPB-208ENST00000561271 ARPC4P59998 168 aa13.23□□□□□ -0.29
CDC42BPB-208ENST00000561271 C10orf55Q5SWW7 151 aa13.23□□□□□ -0.29
CDC42BPB-208ENST00000561271 OVCH2Q7RTZ1 564 aa13.23□□□□□ -0.29
CDC42BPB-208ENST00000561271 TEX45Q8NA69 505 aa13.23□□□□□ -0.29
CDC42BPB-208ENST00000561271 BEST4Q8NFU0 473 aa13.23□□□□□ -0.29
CDC42BPB-208ENST00000561271 GPHA2Q96T91 129 aa13.23□□□□□ -0.29
CDC42BPB-208ENST00000561271 DCUN1D5Q9BTE7 237 aa13.23□□□□□ -0.29
CDC42BPB-208ENST00000561271 ZNF430Q9H8G1 570 aaPredicted RBP13.23□□□□□ -0.29
CDC42BPB-208ENST00000561271 MRPS7Q9Y2R9 242 aaKnown RBP13.23□□□□□ -0.29
CDC42BPB-208ENST00000561271 ANKRD34BA5PLL1 514 aa13.22□□□□□ -0.29
CDC42BPB-208ENST00000561271 CDK10Q15131 360 aa13.22□□□□□ -0.29
CDC42BPB-208ENST00000561271 ACSM6Q6P461 480 aa13.22□□□□□ -0.29
CDC42BPB-208ENST00000561271 HAPLN4Q86UW8 402 aa13.22□□□□□ -0.29
CDC42BPB-208ENST00000561271 VKORC1L1Q8N0U8 176 aa13.22□□□□□ -0.29
CDC42BPB-208ENST00000561271 TCTEX1D2Q8WW35 142 aa13.22□□□□□ -0.29
CDC42BPB-208ENST00000561271 TINAGL1Q9GZM7 467 aaPredicted RBP13.22□□□□□ -0.29
CDC42BPB-208ENST00000561271 TAS2R8Q9NYW2 309 aa13.22□□□□□ -0.29
CDC42BPB-208ENST00000561271 SPATA2Q9UM82 520 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms