RNA–Protein interactions for RNA: ENST00000561211.5

USP8-217, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-217ENST00000561211 EFCAB11Q9BUY7 163 aa2.22□□□□□ -2.05
USP8-217ENST00000561211 TMEM147Q9BVK8 224 aa2.22□□□□□ -2.05
USP8-217ENST00000561211 TBL1XR1Q9BZK7 514 aa2.22□□□□□ -2.05
USP8-217ENST00000561211 C20orf27Q9GZN8 174 aa2.22□□□□□ -2.05
USP8-217ENST00000561211 CHST6Q9GZX3 395 aa2.22□□□□□ -2.05
USP8-217ENST00000561211 MED28Q9H204 178 aa2.22□□□□□ -2.05
USP8-217ENST00000561211 DEC1Q9P2X7 70 aa2.22□□□□□ -2.05
USP8-217ENST00000561211 DHCR7Q9UBM7 475 aaKnown RBP2.22□□□□□ -2.05
USP8-217ENST00000561211 RPS6KB2Q9UBS0 482 aa2.22□□□□□ -2.05
USP8-217ENST00000561211 FIS1Q9Y3D6 152 aa2.22□□□□□ -2.05
USP8-217ENST00000561211 MIA3Q5JRA6 1907 aa2.22□□□□□ -2.05
USP8-217ENST00000561211 SMARCA2P51531 1590 aa2.22□□□□□ -2.05
USP8-217ENST00000561211 NAV1Q8NEY1 1877 aa2.22□□□□□ -2.05
USP8-217ENST00000561211 PRRC2AP48634 2157 aaKnown RBP2.22□□□□□ -2.05
USP8-217ENST00000561211 MEGF6O75095 1541 aa2.22□□□□□ -2.05
USP8-217ENST00000561211 COL16A1Q07092 1604 aaPredicted RBP2.21□□□□□ -2.06
USP8-217ENST00000561211 IGHV1-69-2A0A0G2JMI3 117 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 IGHV5-10-1A0A0J9YXX1 117 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 A0A1B0GV90 55 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 C9JQL5 133 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 SETD1AO15047 1707 aaKnown RBP2.21□□□□□ -2.06
USP8-217ENST00000561211 HMGB3O15347 200 aaKnown RBP2.21□□□□□ -2.06
USP8-217ENST00000561211 CST8O60676 142 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 POP7O75817 140 aaKnown RBP2.21□□□□□ -2.06
USP8-217ENST00000561211 OR2J2O76002 312 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 APOC1P02654 83 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 C1QCP02747 245 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 OPN1SWP03999 348 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 CSN2P05814 226 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 BPGMP07738 259 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 TLX1NBP0CAT3 122 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 CPMP14384 443 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 ZNF823P16415 610 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 RPS3P23396 243 aaKnown RBP eCLIP2.21□□□□□ -2.06
USP8-217ENST00000561211 GABRR1P24046 479 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 BLVRBP30043 206 aaPredicted RBP2.21□□□□□ -2.06
USP8-217ENST00000561211 GABRA3P34903 492 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 OPRM1P35372 400 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 G6PCP35575 357 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 FGF12P61328 243 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 NCALDP61601 193 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 TBPL1P62380 186 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 PSG7Q13046 419 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 CST6Q15828 149 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 LTC4SQ16873 150 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 TNFAIP8L3Q5GJ75 292 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 ZFAND6Q6FIF0 208 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 NTM-AS1Q6ZSK4 140 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 FA2HQ7L5A8 372 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 LRRC28Q86X40 367 aaPredicted RBP2.21□□□□□ -2.06
USP8-217ENST00000561211 ANKRD29Q8N6D5 301 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 OR4D11Q8NGI4 311 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 MAL2Q969L2 176 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 ROPN1LQ96C74 230 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 GNPNAT1Q96EK6 184 aaPredicted RBP2.21□□□□□ -2.06
USP8-217ENST00000561211 PDXPQ96GD0 296 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 ABHD14BQ96IU4 210 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 CAPZA3Q96KX2 299 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 IGF2BP2-AS1Q96M15 143 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 CCDC115Q96NT0 180 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 GPR82Q96P67 336 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 MIA2Q96PC5 1412 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 GPER1Q99527 375 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 CCL13Q99616 98 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 HSPB9Q9BQS6 159 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 PBOV1Q9GZY1 135 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 FAM96AQ9H5X1 160 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 TMEM38BQ9NVV0 291 aa2.21□□□□□ -2.06
USP8-217ENST00000561211 MRPS16Q9Y3D3 137 aaKnown RBP2.21□□□□□ -2.06
USP8-217ENST00000561211 YLPM1P49750 1951 aaKnown RBP2.21□□□□□ -2.06
USP8-217ENST00000561211 RAI1Q7Z5J4 1906 aaPredicted RBP2.21□□□□□ -2.06
USP8-217ENST00000561211 GTF3C1Q12789 2109 aa2.2□□□□□ -2.06
USP8-217ENST00000561211 TRAV4A0A0B4J268 109 aa2.2□□□□□ -2.06
USP8-217ENST00000561211 IGKV1-12A0A0C4DH73 117 aa2.2□□□□□ -2.06
USP8-217ENST00000561211 A0A1B0GX51 115 aa2.2□□□□□ -2.06
USP8-217ENST00000561211 E7EQ34 232 aa2.2□□□□□ -2.06
USP8-217ENST00000561211 G3V2T6 193 aa2.2□□□□□ -2.06
USP8-217ENST00000561211 LST1O00453 97 aa2.2□□□□□ -2.06
USP8-217ENST00000561211 DEGS1O15121 323 aa2.2□□□□□ -2.06
USP8-217ENST00000561211 BET1O15155 118 aa2.2□□□□□ -2.06
USP8-217ENST00000561211 OR7C2O60412 319 aa2.2□□□□□ -2.06
USP8-217ENST00000561211 EIF1BO60739 113 aaKnown RBP2.2□□□□□ -2.06
USP8-217ENST00000561211 GADD45GO95257 159 aa2.2□□□□□ -2.06
USP8-217ENST00000561211 INSP01308 110 aa2.2□□□□□ -2.06
USP8-217ENST00000561211 IGKV1D-12P01611 117 aa2.2□□□□□ -2.06
USP8-217ENST00000561211 IGLV1-47P01700 117 aa2.2□□□□□ -2.06
USP8-217ENST00000561211 IGLV3-25P01717 112 aa2.2□□□□□ -2.06
USP8-217ENST00000561211 C8GP07360 202 aa2.2□□□□□ -2.06
USP8-217ENST00000561211 SEC11BP0C7V7 166 aa2.2□□□□□ -2.06
USP8-217ENST00000561211 SMIM10L2AP0DMW4 78 aa2.2□□□□□ -2.06
USP8-217ENST00000561211 SMIM10L2BP0DMW5 78 aa2.2□□□□□ -2.06
USP8-217ENST00000561211 RPL7P18124 248 aaKnown RBP2.2□□□□□ -2.06
USP8-217ENST00000561211 ORM2P19652 201 aa2.2□□□□□ -2.06
USP8-217ENST00000561211 EIF1P41567 113 aaKnown RBP2.2□□□□□ -2.06
USP8-217ENST00000561211 ZNF83P51522 516 aa2.2□□□□□ -2.06
USP8-217ENST00000561211 CMC4P56277 68 aaPredicted RBP2.2□□□□□ -2.06
USP8-217ENST00000561211 DNAJB13P59910 316 aa2.2□□□□□ -2.06
USP8-217ENST00000561211 CKS1BP61024 79 aa2.2□□□□□ -2.06
USP8-217ENST00000561211 LAIR2Q6ISS4 152 aa2.2□□□□□ -2.06
USP8-217ENST00000561211 RPL13AP3Q6NVV1 102 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms