RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 VMA21Q3ZAQ7 101 aa12.42□□□□□ -0.42
LMX1B-204ENST00000561065 PYHIN1Q6K0P9 492 aa12.42□□□□□ -0.42
LMX1B-204ENST00000561065 ZNF383Q8NA42 475 aa12.42□□□□□ -0.42
LMX1B-204ENST00000561065 C15orf40Q8WUR7 153 aa12.42□□□□□ -0.42
LMX1B-204ENST00000561065 TMEM68Q96MH6 324 aa12.42□□□□□ -0.42
LMX1B-204ENST00000561065 HSD17B10Q99714 261 aaKnown RBP12.42□□□□□ -0.42
LMX1B-204ENST00000561065 COMMD3Q9UBI1 195 aa12.42□□□□□ -0.42
LMX1B-204ENST00000561065 NFYAP23511 347 aaPredicted RBP12.41□□□□□ -0.42
LMX1B-204ENST00000561065 CX3CL1P78423 397 aa12.41□□□□□ -0.42
LMX1B-204ENST00000561065 C11orf87Q6NUJ2 197 aa12.41□□□□□ -0.42
LMX1B-204ENST00000561065 PPP1R27Q86WC6 154 aa12.41□□□□□ -0.42
LMX1B-204ENST00000561065 ZBTB34Q8NCN2 500 aa12.41□□□□□ -0.42
LMX1B-204ENST00000561065 OSR1Q8TAX0 266 aaPredicted RBP12.41□□□□□ -0.42
LMX1B-204ENST00000561065 DPF1Q92782 380 aa12.41□□□□□ -0.42
LMX1B-204ENST00000561065 HARBI1Q96MB7 349 aa12.41□□□□□ -0.42
LMX1B-204ENST00000561065 DCUN1D5Q9BTE7 237 aa12.41□□□□□ -0.42
LMX1B-204ENST00000561065 HUWE1Q7Z6Z7 4374 aaKnown RBP12.41□□□□□ -0.42
LMX1B-204ENST00000561065 FCN1O00602 326 aa12.4□□□□□ -0.42
LMX1B-204ENST00000561065 SSX5O60225 188 aa12.4□□□□□ -0.42
LMX1B-204ENST00000561065 EGR2P11161 476 aaPredicted RBP12.4□□□□□ -0.42
LMX1B-204ENST00000561065 DUTP33316 252 aaKnown RBP12.4□□□□□ -0.42
LMX1B-204ENST00000561065 CRIP2P52943 208 aaPredicted RBP12.4□□□□□ -0.42
LMX1B-204ENST00000561065 TAS2R46P59540 309 aa12.4□□□□□ -0.42
LMX1B-204ENST00000561065 NCS1P62166 190 aa12.4□□□□□ -0.42
LMX1B-204ENST00000561065 GNB1P62873 340 aa12.4□□□□□ -0.42
LMX1B-204ENST00000561065 MSMO1Q15800 293 aa12.4□□□□□ -0.42
LMX1B-204ENST00000561065 ECSCRQ19T08 205 aa12.4□□□□□ -0.42
LMX1B-204ENST00000561065 AKIRIN2Q53H80 203 aa12.4□□□□□ -0.42
LMX1B-204ENST00000561065 TMEM177Q53S58 311 aa12.4□□□□□ -0.42
LMX1B-204ENST00000561065 ZNF491Q8N8L2 437 aa12.4□□□□□ -0.42
LMX1B-204ENST00000561065 MINDY2Q8NBR6 621 aa12.4□□□□□ -0.42
LMX1B-204ENST00000561065 BVESQ8NE79 360 aa12.4□□□□□ -0.42
LMX1B-204ENST00000561065 OR5AP2Q8NGF4 316 aa12.4□□□□□ -0.42
LMX1B-204ENST00000561065 OR5M8Q8NGP6 311 aa12.4□□□□□ -0.42
LMX1B-204ENST00000561065 CASTOR1Q8WTX7 329 aa12.4□□□□□ -0.42
LMX1B-204ENST00000561065 C5orf30Q96GV9 206 aa12.4□□□□□ -0.42
LMX1B-204ENST00000561065 TPSG1Q9NRR2 321 aa12.4□□□□□ -0.42
LMX1B-204ENST00000561065 IGKV1D-8A0A087WSZ0 117 aa12.39□□□□□ -0.43
LMX1B-204ENST00000561065 I3L521 148 aa12.39□□□□□ -0.43
LMX1B-204ENST00000561065 NOL3O60936 208 aaKnown RBP12.39□□□□□ -0.43
LMX1B-204ENST00000561065 TUSC2O75896 110 aa12.39□□□□□ -0.43
LMX1B-204ENST00000561065 ACTL6BO94805 426 aa12.39□□□□□ -0.43
LMX1B-204ENST00000561065 IGKV1-16P04430 117 aa12.39□□□□□ -0.43
LMX1B-204ENST00000561065 ZNF182P17025 639 aaPredicted RBP12.39□□□□□ -0.43
LMX1B-204ENST00000561065 FCGR2CP31995 323 aa12.39□□□□□ -0.43
LMX1B-204ENST00000561065 KIR2DS2P43631 304 aa12.39□□□□□ -0.43
LMX1B-204ENST00000561065 CDK10Q15131 360 aa12.39□□□□□ -0.43
LMX1B-204ENST00000561065 GPR107Q5VW38 600 aa12.39□□□□□ -0.43
LMX1B-204ENST00000561065 ZNF66Q6ZN08 573 aa12.39□□□□□ -0.43
LMX1B-204ENST00000561065 TEX45Q8NA69 505 aa12.39□□□□□ -0.43
LMX1B-204ENST00000561065 GIMAP1Q8WWP7 306 aa12.39□□□□□ -0.43
LMX1B-204ENST00000561065 UBE2E2Q96LR5 201 aa12.39□□□□□ -0.43
LMX1B-204ENST00000561065 OR5B12Q96R08 314 aa12.39□□□□□ -0.43
LMX1B-204ENST00000561065 CLCC1Q96S66 551 aa12.39□□□□□ -0.43
LMX1B-204ENST00000561065 FOXA2Q9Y261 457 aaPredicted RBP12.39□□□□□ -0.43
LMX1B-204ENST00000561065 VSIG4Q9Y279 399 aa12.39□□□□□ -0.43
LMX1B-204ENST00000561065 RBMX2Q9Y388 322 aaKnown RBP12.39□□□□□ -0.43
LMX1B-204ENST00000561065 KMT2CQ8NEZ4 4911 aaKnown RBP12.39□□□□□ -0.43
LMX1B-204ENST00000561065 J3QRK9 145 aa12.38□□□□□ -0.43
LMX1B-204ENST00000561065 SLC25A17O43808 307 aa12.38□□□□□ -0.43
LMX1B-204ENST00000561065 TPPPO94811 219 aa12.38□□□□□ -0.43
LMX1B-204ENST00000561065 S100GP29377 79 aa12.38□□□□□ -0.43
LMX1B-204ENST00000561065 TGFBR1P36897 503 aa12.38□□□□□ -0.43
LMX1B-204ENST00000561065 TAS2R20P59543 309 aa12.38□□□□□ -0.43
LMX1B-204ENST00000561065 HERV-K104P61576 105 aa12.38□□□□□ -0.43
LMX1B-204ENST00000561065 FXYD3Q14802 87 aa12.38□□□□□ -0.43
LMX1B-204ENST00000561065 ACTBL2Q562R1 376 aa12.38□□□□□ -0.43
LMX1B-204ENST00000561065 KCTD9Q7L273 389 aa12.38□□□□□ -0.43
LMX1B-204ENST00000561065 OR11H1Q8NG94 326 aa12.38□□□□□ -0.43
LMX1B-204ENST00000561065 VSTM2AQ8TAG5 236 aa12.38□□□□□ -0.43
LMX1B-204ENST00000561065 FAM103A1Q9BTL3 118 aaKnown RBP12.38□□□□□ -0.43
LMX1B-204ENST00000561065 ALX4Q9H161 411 aaPredicted RBP12.38□□□□□ -0.43
LMX1B-204ENST00000561065 SLA2Q9H6Q3 261 aa12.38□□□□□ -0.43
LMX1B-204ENST00000561065 SCPEP1Q9HB40 452 aa12.38□□□□□ -0.43
LMX1B-204ENST00000561065 NUBP2Q9Y5Y2 271 aa12.38□□□□□ -0.43
LMX1B-204ENST00000561065 A0A1W2PN81 502 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 FAM25AB3EWG3 89 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 FAM25CB3EWG5 89 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 FAM25GB3EWG6 89 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 SULT1C2O00338 296 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 GABARAPO95166 117 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 CRYZL1O95825 349 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 HRASP01112 189 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 CHRNA7P36544 502 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 RAB9AP51151 201 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 SSBP2P81877 361 aaPredicted RBP12.37□□□□□ -0.43
LMX1B-204ENST00000561065 RUNX1Q01196 453 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 CATR1Q13166 79 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 DEFB121Q5J5C9 76 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 UNQ5815/PRO19632Q6UWF5 114 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 GVQW1Q8N7I0 195 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 POC5Q8NA72 575 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 OR4S2Q8NH73 311 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 CD300LFQ8TDQ1 290 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 ARPC1AQ92747 370 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 BCL7BQ9BQE9 202 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 SCOCQ9UIL1 159 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 ADAM30Q9UKF2 790 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 A3GALT2U3KPV4 340 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 SEC14L6B5MCN3 397 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms