RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 LYRM2Q9NU23 88 aaPredicted RBP13.98□□□□□ -0.17
HDDC3-206ENST00000561036 HSPB7Q9UBY9 170 aa13.98□□□□□ -0.17
HDDC3-206ENST00000561036 WSB1Q9Y6I7 421 aa13.98□□□□□ -0.17
HDDC3-206ENST00000561036 SPDEFO95238 335 aa13.97□□□□□ -0.17
HDDC3-206ENST00000561036 LY86O95711 162 aa13.97□□□□□ -0.17
HDDC3-206ENST00000561036 HRASP01112 189 aa13.97□□□□□ -0.17
HDDC3-206ENST00000561036 IGHV2-5P01817 119 aa13.97□□□□□ -0.17
HDDC3-206ENST00000561036 IGHV4-39P01824 125 aa13.97□□□□□ -0.17
HDDC3-206ENST00000561036 HTR2BP41595 481 aa13.97□□□□□ -0.17
HDDC3-206ENST00000561036 RAB14P61106 215 aa13.97□□□□□ -0.17
HDDC3-206ENST00000561036 CLLU1Q5K131 121 aa13.97□□□□□ -0.17
HDDC3-206ENST00000561036 KIR3DL3Q8N743 410 aa13.97□□□□□ -0.17
HDDC3-206ENST00000561036 BEND2Q8NDZ0 799 aa13.97□□□□□ -0.17
HDDC3-206ENST00000561036 ST6GALNAC6Q969X2 333 aa13.97□□□□□ -0.17
HDDC3-206ENST00000561036 SMIM8Q96KF7 97 aa13.97□□□□□ -0.17
HDDC3-206ENST00000561036 PCGF1Q9BSM1 259 aa13.97□□□□□ -0.17
HDDC3-206ENST00000561036 CLEC7AQ9BXN2 247 aa13.97□□□□□ -0.17
HDDC3-206ENST00000561036 GSX2Q9BZM3 304 aa13.97□□□□□ -0.17
HDDC3-206ENST00000561036 YLPM1P49750 1951 aaKnown RBP13.96□□□□□ -0.17
HDDC3-206ENST00000561036 IGHV2-26A0A0B4J1V2 119 aa13.96□□□□□ -0.17
HDDC3-206ENST00000561036 APOA2P02652 100 aa13.96□□□□□ -0.17
HDDC3-206ENST00000561036 PAX9P55771 341 aa13.96□□□□□ -0.17
HDDC3-206ENST00000561036 TNFRSF9Q07011 255 aa13.96□□□□□ -0.17
HDDC3-206ENST00000561036 BAXQ07812 192 aa13.96□□□□□ -0.17
HDDC3-206ENST00000561036 SP5Q6BEB4 398 aaPredicted RBP13.96□□□□□ -0.17
HDDC3-206ENST00000561036 OR8H3Q8N146 312 aa13.96□□□□□ -0.17
HDDC3-206ENST00000561036 OR5AN1Q8NGI8 311 aa13.96□□□□□ -0.17
HDDC3-206ENST00000561036 SLC35D1Q9NTN3 355 aa13.96□□□□□ -0.17
HDDC3-206ENST00000561036 FBXL17Q9UF56 701 aa13.96□□□□□ -0.17
HDDC3-206ENST00000561036 AMMECR1Q9Y4X0 333 aaPredicted RBP13.96□□□□□ -0.17
HDDC3-206ENST00000561036 USF3Q68DE3 2245 aa13.95□□□□□ -0.18
HDDC3-206ENST00000561036 A8MXK9 166 aa13.95□□□□□ -0.18
HDDC3-206ENST00000561036 NDUFS8O00217 210 aa13.95□□□□□ -0.18
HDDC3-206ENST00000561036 JTBO76095 146 aa13.95□□□□□ -0.18
HDDC3-206ENST00000561036 CRYZL1O95825 349 aa13.95□□□□□ -0.18
HDDC3-206ENST00000561036 IGLV1-47P01700 117 aa13.95□□□□□ -0.18
HDDC3-206ENST00000561036 CAV2P51636 162 aa13.95□□□□□ -0.18
HDDC3-206ENST00000561036 EWSR1Q01844 656 aaKnown RBP eCLIP13.95□□□□□ -0.18
HDDC3-206ENST00000561036 BAP18Q8IXM2 172 aa13.95□□□□□ -0.18
HDDC3-206ENST00000561036 TMEM252Q8N6L7 170 aa13.95□□□□□ -0.18
HDDC3-206ENST00000561036 ZNF525Q8N782 197 aa13.95□□□□□ -0.18
HDDC3-206ENST00000561036 OR13D1Q8NGV5 346 aa13.95□□□□□ -0.18
HDDC3-206ENST00000561036 OR52E5Q8NH55 327 aa13.95□□□□□ -0.18
HDDC3-206ENST00000561036 MARVELD3Q96A59 401 aa13.95□□□□□ -0.18
HDDC3-206ENST00000561036 MRPL20Q9BYC9 149 aaKnown RBP13.95□□□□□ -0.18
HDDC3-206ENST00000561036 ONECUT1Q9UBC0 465 aa13.95□□□□□ -0.18
HDDC3-206ENST00000561036 BORCS7-ASMTA0A0B4J1R7 106 aa13.94□□□□□ -0.18
HDDC3-206ENST00000561036 FAM24AA6NFZ4 105 aa13.94□□□□□ -0.18
HDDC3-206ENST00000561036 ENSAO43768 121 aaKnown RBP13.94□□□□□ -0.18
HDDC3-206ENST00000561036 TMEM50AO95807 157 aa13.94□□□□□ -0.18
HDDC3-206ENST00000561036 PAX1P15863 534 aa13.94□□□□□ -0.18
HDDC3-206ENST00000561036 MC5RP33032 325 aa13.94□□□□□ -0.18
HDDC3-206ENST00000561036 UBE2KP61086 200 aa13.94□□□□□ -0.18
HDDC3-206ENST00000561036 HLA-DRB5Q30154 266 aa13.94□□□□□ -0.18
HDDC3-206ENST00000561036 EIF5AL1Q6IS14 154 aaKnown RBP13.94□□□□□ -0.18
HDDC3-206ENST00000561036 ALKAL2Q6UX46 152 aa13.94□□□□□ -0.18
HDDC3-206ENST00000561036 OSR1Q8TAX0 266 aaPredicted RBP13.94□□□□□ -0.18
HDDC3-206ENST00000561036 CIB3Q96Q77 187 aaPredicted RBP13.94□□□□□ -0.18
HDDC3-206ENST00000561036 NABP2Q9BQ15 211 aa13.94□□□□□ -0.18
HDDC3-206ENST00000561036 NARFLQ9H6Q4 476 aa13.94□□□□□ -0.18
HDDC3-206ENST00000561036 ZNRD1Q9P1U0 126 aa13.94□□□□□ -0.18
HDDC3-206ENST00000561036 RPS10-NUDT3A0A1W2PQS6 291 aa13.93□□□□□ -0.18
HDDC3-206ENST00000561036 IGSF23A1L1A6 192 aa13.93□□□□□ -0.18
HDDC3-206ENST00000561036 H0YJW9 148 aa13.93□□□□□ -0.18
HDDC3-206ENST00000561036 TXNL1O43396 289 aa13.93□□□□□ -0.18
HDDC3-206ENST00000561036 ATP6V1G1O75348 118 aa13.93□□□□□ -0.18
HDDC3-206ENST00000561036 NXPH3O95157 252 aa13.93□□□□□ -0.18
HDDC3-206ENST00000561036 PRTN3P24158 256 aa13.93□□□□□ -0.18
HDDC3-206ENST00000561036 RAB13P51153 203 aa13.93□□□□□ -0.18
HDDC3-206ENST00000561036 PDLIM3Q53GG5 364 aaPredicted RBP13.93□□□□□ -0.18
HDDC3-206ENST00000561036 PDPNQ86YL7 162 aa13.93□□□□□ -0.18
HDDC3-206ENST00000561036 TGIF2LXQ8IUE1 241 aa13.93□□□□□ -0.18
HDDC3-206ENST00000561036 ZNF295-AS1Q8N0V1 137 aa13.93□□□□□ -0.18
HDDC3-206ENST00000561036 Q8N7P7 452 aa13.93□□□□□ -0.18
HDDC3-206ENST00000561036 UBAC2Q8NBM4 344 aa13.93□□□□□ -0.18
HDDC3-206ENST00000561036 OR4A16Q8NH70 328 aa13.93□□□□□ -0.18
HDDC3-206ENST00000561036 RHOVQ96L33 236 aa13.93□□□□□ -0.18
HDDC3-206ENST00000561036 PIMREGQ9BSJ6 248 aa13.93□□□□□ -0.18
HDDC3-206ENST00000561036 SLC25A32Q9H2D1 315 aa13.93□□□□□ -0.18
HDDC3-206ENST00000561036 RBKSQ9H477 322 aa13.93□□□□□ -0.18
HDDC3-206ENST00000561036 UNKLQ9H9P5 680 aaKnown RBP13.93□□□□□ -0.18
HDDC3-206ENST00000561036 TMEM140Q9NV12 185 aa13.93□□□□□ -0.18
HDDC3-206ENST00000561036 KPTNQ9Y664 436 aa13.93□□□□□ -0.18
HDDC3-206ENST00000561036 HRNRQ86YZ3 2850 aaPredicted RBP13.93□□□□□ -0.18
HDDC3-206ENST00000561036 MALRD1Q5VYJ5 2156 aa13.93□□□□□ -0.18
HDDC3-206ENST00000561036 DOCK11Q5JSL3 2073 aa13.92□□□□□ -0.18
HDDC3-206ENST00000561036 RBMXL2O75526 392 aaKnown RBP13.92□□□□□ -0.18
HDDC3-206ENST00000561036 OR9G9P0C7N8 305 aa13.92□□□□□ -0.18
HDDC3-206ENST00000561036 SPCS3P61009 180 aa13.92□□□□□ -0.18
HDDC3-206ENST00000561036 LMO4P61968 165 aa13.92□□□□□ -0.18
HDDC3-206ENST00000561036 NHLH2Q02577 135 aa13.92□□□□□ -0.18
HDDC3-206ENST00000561036 TMEM177Q53S58 311 aa13.92□□□□□ -0.18
HDDC3-206ENST00000561036 RPL7L1Q6DKI1 246 aaKnown RBP13.92□□□□□ -0.18
HDDC3-206ENST00000561036 ZNF429Q86V71 674 aa13.92□□□□□ -0.18
HDDC3-206ENST00000561036 STX12Q86Y82 276 aa13.92□□□□□ -0.18
HDDC3-206ENST00000561036 OR11H6Q8NGC7 330 aa13.92□□□□□ -0.18
HDDC3-206ENST00000561036 CLDND2Q8NHS1 167 aa13.92□□□□□ -0.18
HDDC3-206ENST00000561036 BPESC1Q9GZL8 116 aa13.92□□□□□ -0.18
HDDC3-206ENST00000561036 ARV1Q9H2C2 271 aa13.92□□□□□ -0.18
HDDC3-206ENST00000561036 PSENENQ9NZ42 101 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms