RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 USF1P22415 310 aaPredicted RBP9.15□□□□□ -0.94
SNX1-212ENST00000560861 COX7A1P24310 79 aa9.15□□□□□ -0.94
SNX1-212ENST00000560861 PRRX1P54821 245 aa9.15□□□□□ -0.94
SNX1-212ENST00000560861 LOXL1Q08397 574 aaPredicted RBP9.15□□□□□ -0.94
SNX1-212ENST00000560861 ZNF816Q0VGE8 651 aaPredicted RBP9.15□□□□□ -0.94
SNX1-212ENST00000560861 KLRD1Q13241 179 aa9.15□□□□□ -0.94
SNX1-212ENST00000560861 POU2AF1Q16633 256 aa9.15□□□□□ -0.94
SNX1-212ENST00000560861 TMEM65Q6PI78 240 aa9.15□□□□□ -0.94
SNX1-212ENST00000560861 PRSS57Q6UWY2 283 aa9.15□□□□□ -0.94
SNX1-212ENST00000560861 VMO1Q7Z5L0 202 aa9.15□□□□□ -0.94
SNX1-212ENST00000560861 OR13D1Q8NGV5 346 aa9.15□□□□□ -0.94
SNX1-212ENST00000560861 PDCD10Q9BUL8 212 aa9.15□□□□□ -0.94
SNX1-212ENST00000560861 COMMD9Q9P000 198 aa9.15□□□□□ -0.94
SNX1-212ENST00000560861 MMP24Q9Y5R2 645 aa9.15□□□□□ -0.94
SNX1-212ENST00000560861 MAP1AP78559 2803 aaPredicted RBP9.15□□□□□ -0.94
SNX1-212ENST00000560861 NOTCH2Q04721 2471 aa9.14□□□□□ -0.95
SNX1-212ENST00000560861 A0A1B0GU03 582 aa9.14□□□□□ -0.95
SNX1-212ENST00000560861 HMSDA8MTL9 139 aa9.14□□□□□ -0.95
SNX1-212ENST00000560861 H0YJW9 148 aa9.14□□□□□ -0.95
SNX1-212ENST00000560861 TOR1AO14656 332 aa9.14□□□□□ -0.95
SNX1-212ENST00000560861 FCGR3BO75015 233 aa9.14□□□□□ -0.95
SNX1-212ENST00000560861 HPRT1P00492 218 aa9.14□□□□□ -0.95
SNX1-212ENST00000560861 MBPP02686 304 aaPredicted RBP9.14□□□□□ -0.95
SNX1-212ENST00000560861 IL6RP08887 468 aaPredicted RBP9.14□□□□□ -0.95
SNX1-212ENST00000560861 IL3RAP26951 378 aa9.14□□□□□ -0.95
SNX1-212ENST00000560861 PSMB6P28072 239 aa9.14□□□□□ -0.95
SNX1-212ENST00000560861 ID3Q02535 119 aa9.14□□□□□ -0.95
SNX1-212ENST00000560861 RAB32Q13637 225 aa9.14□□□□□ -0.95
SNX1-212ENST00000560861 IZUMO4Q1ZYL8 232 aa9.14□□□□□ -0.95
SNX1-212ENST00000560861 AARDQ4LEZ3 155 aa9.14□□□□□ -0.95
SNX1-212ENST00000560861 Q5PR19 223 aa9.14□□□□□ -0.95
SNX1-212ENST00000560861 C11orf87Q6NUJ2 197 aa9.14□□□□□ -0.95
SNX1-212ENST00000560861 FAM219AQ8IW50 185 aa9.14□□□□□ -0.95
SNX1-212ENST00000560861 OR10X1Q8NGY0 326 aa9.14□□□□□ -0.95
SNX1-212ENST00000560861 AJUBAQ96IF1 538 aa9.14□□□□□ -0.95
SNX1-212ENST00000560861 SPIN2AQ99865 258 aa9.14□□□□□ -0.95
SNX1-212ENST00000560861 SPIN2BQ9BPZ2 258 aa9.14□□□□□ -0.95
SNX1-212ENST00000560861 PCGF1Q9BSM1 259 aa9.14□□□□□ -0.95
SNX1-212ENST00000560861 HEXA-AS1Q9H8Q6 139 aa9.14□□□□□ -0.95
SNX1-212ENST00000560861 COA4Q9NYJ1 87 aa9.14□□□□□ -0.95
SNX1-212ENST00000560861 PRELID3BQ9Y3B1 194 aa9.14□□□□□ -0.95
SNX1-212ENST00000560861 TET2Q6N021 2002 aaPredicted RBP9.14□□□□□ -0.95
SNX1-212ENST00000560861 CELSR1Q9NYQ6 3014 aa9.13□□□□□ -0.95
SNX1-212ENST00000560861 A0A1W2PPI3 338 aa9.13□□□□□ -0.95
SNX1-212ENST00000560861 CXCL2P19875 107 aa9.13□□□□□ -0.95
SNX1-212ENST00000560861 REG1BP48304 166 aa9.13□□□□□ -0.95
SNX1-212ENST00000560861 TAGLNQ01995 201 aaKnown RBP9.13□□□□□ -0.95
SNX1-212ENST00000560861 FGL1Q08830 312 aa9.13□□□□□ -0.95
SNX1-212ENST00000560861 HABP2Q14520 560 aaPredicted RBP9.13□□□□□ -0.95
SNX1-212ENST00000560861 LGALSLQ3ZCW2 172 aaPredicted RBP9.13□□□□□ -0.95
SNX1-212ENST00000560861 TMEM177Q53S58 311 aa9.13□□□□□ -0.95
SNX1-212ENST00000560861 TPTE2P1Q5T6R2 138 aa9.13□□□□□ -0.95
SNX1-212ENST00000560861 DHRS7BQ6IAN0 325 aaPredicted RBP9.13□□□□□ -0.95
SNX1-212ENST00000560861 PRSS54Q6PEW0 395 aa9.13□□□□□ -0.95
SNX1-212ENST00000560861 DMBX1Q8NFW5 382 aa9.13□□□□□ -0.95
SNX1-212ENST00000560861 OR4S2Q8NH73 311 aa9.13□□□□□ -0.95
SNX1-212ENST00000560861 GRPEL2Q8TAA5 225 aa9.13□□□□□ -0.95
SNX1-212ENST00000560861 R3HDM4Q96D70 268 aa9.13□□□□□ -0.95
SNX1-212ENST00000560861 RBMXL1Q96E39 390 aaKnown RBP9.13□□□□□ -0.95
SNX1-212ENST00000560861 SLC35D1Q9NTN3 355 aa9.13□□□□□ -0.95
SNX1-212ENST00000560861 TNFSF18Q9UNG2 199 aa9.13□□□□□ -0.95
SNX1-212ENST00000560861 RCL1Q9Y2P8 373 aaKnown RBP9.13□□□□□ -0.95
SNX1-212ENST00000560861 AMMECR1Q9Y4X0 333 aaPredicted RBP9.13□□□□□ -0.95
SNX1-212ENST00000560861 MYO9AB2RTY4 2548 aa9.13□□□□□ -0.95
SNX1-212ENST00000560861 OTOGQ6ZRI0 2925 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 IGHV1-3A0A0C4DH29 117 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 MARCH11A6NNE9 402 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 FAM90A9PA6NNJ1 464 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 K7EPK0 472 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 TXNL1O43396 289 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 ATG12O94817 140 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 TOX4O94842 621 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 IGKV1-16P04430 117 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 MSMBP08118 114 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 RRASP10301 218 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 G6PCP35575 357 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 AKR1C2P52895 323 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 SMCO1Q147U7 214 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 LRRC37A5PQ49AS3 106 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 CXorf66Q5JRM2 361 aaPredicted RBP9.12□□□□□ -0.95
SNX1-212ENST00000560861 TGIF2LXQ8IUE1 241 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 FAM71E2Q8N5Q1 922 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 OR1S1Q8NH92 325 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 CFHR4Q92496 578 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 LPAR2Q9HBW0 351 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 PLSCR3Q9NRY6 295 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 PLA2G2EQ9NZK7 142 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 OR5AC2Q9NZP5 309 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 GSKIPQ9P0R6 139 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 DPM3Q9P2X0 92 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 MBD2Q9UBB5 411 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 CACNG5Q9UF02 275 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 POMT1Q9Y6A1 747 aa9.12□□□□□ -0.95
SNX1-212ENST00000560861 FXYD6-FXYD2A0A087WZ82 144 aa9.11□□□□□ -0.95
SNX1-212ENST00000560861 RNF222A6NCQ9 220 aa9.11□□□□□ -0.95
SNX1-212ENST00000560861 SRRM4A7MD48 611 aaKnown RBP9.11□□□□□ -0.95
SNX1-212ENST00000560861 LEUTXA8MZ59 168 aa9.11□□□□□ -0.95
SNX1-212ENST00000560861 B4DSR2 109 aa9.11□□□□□ -0.95
SNX1-212ENST00000560861 DEDDO75618 318 aa9.11□□□□□ -0.95
SNX1-212ENST00000560861 CRYZL1O95825 349 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms