RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, human

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF9-208	ENST00000560311	TFAP2A	P05549	437 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	ELANE	P08246	267 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	PSMB8	P28062	276 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	TGFBR1	P36897	503 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	THBS3	P49746	956 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	GNG2	P59768	71 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	ARL6IP1	Q15041	203 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	TIMM50	Q3ZCQ8	353 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	IDNK	Q5T6J7	187 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	HACD4	Q5VWC8	232 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	FOXB2	Q5VYV0	432 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311		Q6ZS49	121 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	LILRB2	Q8N423	598 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	WFDC9	Q8NEX5	89 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	OR8U1	Q8NH10	309 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	MYOZ3	Q8TDC0	251 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	ABHD5	Q8WTS1	349 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	C4orf3	Q8WVX3	66 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	RAX2	Q96IS3	184 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	DUX3	Q96PT4	197 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	GINS4	Q9BRT9	223 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	TOLLIP	Q9H0E2	274 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	GHITM	Q9H3K2	345 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	FBXL15	Q9H469	300 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	SDHAF2	Q9NX18	166 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	METTL1	Q9UBP6	276 aa	Known RBP	5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	FBXO7	Q9Y3I1	522 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	WSB1	Q9Y6I7	421 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311	A3GALT2	U3KPV4	340 aa		5.08	□□□□□ -1.6
IRF9-208	ENST00000560311		A0A087WXM4	84 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	ANKRD34B	A5PLL1	514 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	SSX5	O60225	188 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	PROP1	O75360	226 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	DUS4L	O95620	317 aa	Known RBP	5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	CA2	P00918	260 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	OR8U9	P0C7N5	309 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	MC5R	P33032	325 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	MYCNOS	P40205	109 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	CRIP2	P52943	208 aa	Predicted RBP	5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	SCAND1	P57086	179 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	RAB25	P57735	213 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	LINC00205	P59089	165 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	FHL3	Q13643	280 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	PSG5	Q15238	335 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	SRSF7	Q16629	238 aa	Known RBP eCLIP	5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	CDNF	Q49AH0	187 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	C19orf54	Q5BKX5	351 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	LIN54	Q6MZP7	749 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	H1FOO	Q8IZA3	346 aa	Predicted RBP	5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	TSPAN14	Q8NG11	270 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	OR5H6	Q8NGV6	325 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	MRAP	Q8TCY5	172 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	ARPC1A	Q92747	370 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	DPF1	Q92782	380 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	ANAPC16	Q96DE5	110 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	HARBI1	Q96MB7	349 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	P2RX4	Q99571	388 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	TSNAX	Q99598	290 aa	Known RBP	5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	FAM103A1	Q9BTL3	118 aa	Known RBP	5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	GPR61	Q9BZJ8	451 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	GNB4	Q9HAV0	340 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	SLC35D1	Q9NTN3	355 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	GAB2	Q9UQC2	676 aa		5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	FOXA2	Q9Y261	457 aa	Predicted RBP	5.07	□□□□□ -1.6
IRF9-208	ENST00000560311	RBM7	Q9Y580	266 aa	Known RBP	5.07	□□□□□ -1.6
IRF9-208	ENST00000560311		A0A1W2PN81	502 aa		5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	CCL24	O00175	119 aa		5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	FCN1	O00602	326 aa		5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	SLC25A17	O43808	307 aa		5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	AIRE	O43918	545 aa		5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	IGLV2-23	P01705	113 aa		5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	PPIF	P30405	207 aa	Known RBP	5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	HOXD3	P31249	432 aa	Predicted RBP	5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	CHRNA7	P36544	502 aa		5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	CDX1	P47902	265 aa	Predicted RBP	5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	ARPC4	P59998	168 aa		5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	LSM3	P62310	102 aa	Known RBP	5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	GNB1	P62873	340 aa		5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	CX3CL1	P78423	397 aa		5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	PITPNA	Q00169	270 aa		5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	CBX3	Q13185	183 aa		5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	RTL8B	Q17RB0	113 aa		5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	ZNF260	Q3ZCT1	412 aa		5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	ZNF660	Q6AZW8	331 aa	Predicted RBP	5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	ZNF645	Q8N7E2	425 aa		5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	TCTEX1D1	Q8N7M0	179 aa		5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	MINDY2	Q8NBR6	621 aa		5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	GRPEL2	Q8TAA5	225 aa		5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	FLYWCH2	Q96CP2	140 aa	Known RBP	5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	YIPF6	Q96EC8	236 aa		5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	CLCC1	Q96S66	551 aa		5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	RNF5	Q99942	180 aa		5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	MCRIP2	Q9BUT9	160 aa	Known RBP	5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	ST6GALNAC5	Q9BVH7	336 aa		5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	DCSTAMP	Q9H295	470 aa		5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	KLK15	Q9H2R5	256 aa		5.06	□□□□□ -1.6
IRF9-208	ENST00000560311	NOTCH1	P46531	2555 aa		5.05	□□□□□ -1.6
IRF9-208	ENST00000560311	TRAV18	A0A075B6X5	111 aa		5.05	□□□□□ -1.6
IRF9-208	ENST00000560311		A0A0A6YYH2	397 aa		5.05	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms