RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 BRWD1-AS2P59051 145 aa13.27□□□□□ -0.29
RPL28-209ENST00000560055 TAS2R19P59542 299 aa13.27□□□□□ -0.29
RPL28-209ENST00000560055 RPS16P62249 146 aaKnown RBP13.27□□□□□ -0.29
RPL28-209ENST00000560055 AADACL3Q5VUY0 350 aa13.27□□□□□ -0.29
RPL28-209ENST00000560055 LIN54Q6MZP7 749 aa13.27□□□□□ -0.29
RPL28-209ENST00000560055 FOXRED2Q8IWF2 684 aa13.27□□□□□ -0.29
RPL28-209ENST00000560055 MFSD4AQ8N468 514 aa13.27□□□□□ -0.29
RPL28-209ENST00000560055 HARBI1Q96MB7 349 aa13.27□□□□□ -0.29
RPL28-209ENST00000560055 NOL4LQ96MY1 436 aaPredicted RBP13.27□□□□□ -0.29
RPL28-209ENST00000560055 GPHA2Q96T91 129 aa13.27□□□□□ -0.29
RPL28-209ENST00000560055 TINAGL1Q9GZM7 467 aaPredicted RBP13.27□□□□□ -0.29
RPL28-209ENST00000560055 TAS2R8Q9NYW2 309 aa13.27□□□□□ -0.29
RPL28-209ENST00000560055 WNK1Q9H4A3 2382 aa13.27□□□□□ -0.29
RPL28-209ENST00000560055 AP4M1O00189 453 aa13.26□□□□□ -0.29
RPL28-209ENST00000560055 CRYZL1O95825 349 aa13.26□□□□□ -0.29
RPL28-209ENST00000560055 IGF1P05019 195 aa13.26□□□□□ -0.29
RPL28-209ENST00000560055 CRYGBP07316 175 aa13.26□□□□□ -0.29
RPL28-209ENST00000560055 CD28P10747 220 aa13.26□□□□□ -0.29
RPL28-209ENST00000560055 S100A5P33763 92 aa13.26□□□□□ -0.29
RPL28-209ENST00000560055 TSPAN5P62079 268 aa13.26□□□□□ -0.29
RPL28-209ENST00000560055 CBX3Q13185 183 aa13.26□□□□□ -0.29
RPL28-209ENST00000560055 RNASE10Q5GAN6 216 aaKnown RBP13.26□□□□□ -0.29
RPL28-209ENST00000560055 C10orf99Q6UWK7 81 aa13.26□□□□□ -0.29
RPL28-209ENST00000560055 MEGF8Q7Z7M0 2845 aa13.26□□□□□ -0.29
RPL28-209ENST00000560055 LHFPL1Q86WI0 220 aa13.26□□□□□ -0.29
RPL28-209ENST00000560055 STPG2Q8N412 459 aa13.26□□□□□ -0.29
RPL28-209ENST00000560055 ARRDC1Q8N5I2 433 aa13.26□□□□□ -0.29
RPL28-209ENST00000560055 OR5AU1Q8NGC0 362 aa13.26□□□□□ -0.29
RPL28-209ENST00000560055 OR4D10Q8NGI6 311 aa13.26□□□□□ -0.29
RPL28-209ENST00000560055 CHPT1Q8WUD6 406 aa13.26□□□□□ -0.29
RPL28-209ENST00000560055 BORCS5Q969J3 196 aa13.26□□□□□ -0.29
RPL28-209ENST00000560055 PRELID3BQ9Y3B1 194 aa13.26□□□□□ -0.29
RPL28-209ENST00000560055 FCN1O00602 326 aa13.25□□□□□ -0.29
RPL28-209ENST00000560055 SHOXO15266 292 aa13.25□□□□□ -0.29
RPL28-209ENST00000560055 TNFSF12O43508 249 aa13.25□□□□□ -0.29
RPL28-209ENST00000560055 FCGR3BO75015 233 aa13.25□□□□□ -0.29
RPL28-209ENST00000560055 FBXO24O75426 580 aa13.25□□□□□ -0.29
RPL28-209ENST00000560055 ETV6P41212 452 aa13.25□□□□□ -0.29
RPL28-209ENST00000560055 UCP3P55916 312 aa13.25□□□□□ -0.29
RPL28-209ENST00000560055 NDPQ00604 133 aa13.25□□□□□ -0.29
RPL28-209ENST00000560055 ZNF79Q15937 498 aa13.25□□□□□ -0.29
RPL28-209ENST00000560055 TCTEX1D4Q5JR98 221 aa13.25□□□□□ -0.29
RPL28-209ENST00000560055 HIST2H2BDQ6DRA6 164 aa13.25□□□□□ -0.29
RPL28-209ENST00000560055 CENPVQ7Z7K6 275 aaPredicted RBP13.25□□□□□ -0.29
RPL28-209ENST00000560055 C11orf44Q8N8P7 122 aa13.25□□□□□ -0.29
RPL28-209ENST00000560055 OR6Q1Q8NGQ2 317 aa13.25□□□□□ -0.29
RPL28-209ENST00000560055 SGMS2Q8NHU3 365 aa13.25□□□□□ -0.29
RPL28-209ENST00000560055 OSR1Q8TAX0 266 aaPredicted RBP13.25□□□□□ -0.29
RPL28-209ENST00000560055 TCTEX1D2Q8WW35 142 aa13.25□□□□□ -0.29
RPL28-209ENST00000560055 OR51J1Q9H342 316 aa13.25□□□□□ -0.29
RPL28-209ENST00000560055 TPSG1Q9NRR2 321 aa13.25□□□□□ -0.29
RPL28-209ENST00000560055 METTL1Q9UBP6 276 aaKnown RBP13.25□□□□□ -0.29
RPL28-209ENST00000560055 LINC00527Q9UJ94 153 aa13.25□□□□□ -0.29
RPL28-209ENST00000560055 PSMB11A5LHX3 300 aa13.24□□□□□ -0.29
RPL28-209ENST00000560055 A6NHS1 94 aa13.24□□□□□ -0.29
RPL28-209ENST00000560055 SLC25A17O43808 307 aa13.24□□□□□ -0.29
RPL28-209ENST00000560055 PTBP1P26599 531 aaKnown RBP eCLIP13.24□□□□□ -0.29
RPL28-209ENST00000560055 CD83Q01151 205 aa13.24□□□□□ -0.29
RPL28-209ENST00000560055 CFHR3Q02985 330 aa13.24□□□□□ -0.29
RPL28-209ENST00000560055 OR2B11Q5JQS5 317 aa13.24□□□□□ -0.29
RPL28-209ENST00000560055 STEAP1BQ6NZ63 245 aa13.24□□□□□ -0.29
RPL28-209ENST00000560055 OR4S2Q8NH73 311 aa13.24□□□□□ -0.29
RPL28-209ENST00000560055 TNCP24821 2201 aa13.23□□□□□ -0.29
RPL28-209ENST00000560055 ANKRD20A5PA0PJZ0 165 aa13.23□□□□□ -0.29
RPL28-209ENST00000560055 ATP6V0E1O15342 81 aa13.23□□□□□ -0.29
RPL28-209ENST00000560055 RBFOX2O43251 390 aaKnown RBP eCLIP13.23□□□□□ -0.29
RPL28-209ENST00000560055 RAB3DO95716 219 aa13.23□□□□□ -0.29
RPL28-209ENST00000560055 IFNA6P05013 189 aa13.23□□□□□ -0.29
RPL28-209ENST00000560055 CSF1P09603 554 aa13.23□□□□□ -0.29
RPL28-209ENST00000560055 ZNF735P0CB33 412 aa13.23□□□□□ -0.29
RPL28-209ENST00000560055 KIR2DS2P43631 304 aa13.23□□□□□ -0.29
RPL28-209ENST00000560055 CRIP2P52943 208 aaPredicted RBP13.23□□□□□ -0.29
RPL28-209ENST00000560055 UBE2KP61086 200 aa13.23□□□□□ -0.29
RPL28-209ENST00000560055 CX3CL1P78423 397 aa13.23□□□□□ -0.29
RPL28-209ENST00000560055 SSBP2P81877 361 aaPredicted RBP13.23□□□□□ -0.29
RPL28-209ENST00000560055 PLGLAQ15195 96 aa13.23□□□□□ -0.29
RPL28-209ENST00000560055 MRGPRG-AS1Q2M3A8 158 aa13.23□□□□□ -0.29
RPL28-209ENST00000560055 PRR31Q5SQ13 230 aa13.23□□□□□ -0.29
RPL28-209ENST00000560055 ZNF329Q86UD4 541 aa13.23□□□□□ -0.29
RPL28-209ENST00000560055 PPP1R27Q86WC6 154 aa13.23□□□□□ -0.29
RPL28-209ENST00000560055 TRIM63Q969Q1 353 aa13.23□□□□□ -0.29
RPL28-209ENST00000560055 CITED2Q99967 270 aaPredicted RBP13.23□□□□□ -0.29
RPL28-209ENST00000560055 RSRP1Q9BUV0 290 aa13.23□□□□□ -0.29
RPL28-209ENST00000560055 ADARB2-AS1A8MUL3 147 aa13.22□□□□□ -0.29
RPL28-209ENST00000560055 GPR31O00270 319 aa13.22□□□□□ -0.29
RPL28-209ENST00000560055 RAMP3O60896 148 aa13.22□□□□□ -0.29
RPL28-209ENST00000560055 PGLYRP1O75594 196 aaPredicted RBP13.22□□□□□ -0.29
RPL28-209ENST00000560055 CA2P00918 260 aa13.22□□□□□ -0.29
RPL28-209ENST00000560055 CATR1Q13166 79 aa13.22□□□□□ -0.29
RPL28-209ENST00000560055 MEF2DQ14814 521 aa13.22□□□□□ -0.29
RPL28-209ENST00000560055 C19orf54Q5BKX5 351 aa13.22□□□□□ -0.29
RPL28-209ENST00000560055 LPCAT3Q6P1A2 487 aa13.22□□□□□ -0.29
RPL28-209ENST00000560055 ZNF562Q6V9R5 426 aa13.22□□□□□ -0.29
RPL28-209ENST00000560055 CMTM1Q8IZ96 169 aa13.22□□□□□ -0.29
RPL28-209ENST00000560055 SLC38A6Q8IZM9 456 aa13.22□□□□□ -0.29
RPL28-209ENST00000560055 TEX45Q8NA69 505 aa13.22□□□□□ -0.29
RPL28-209ENST00000560055 OR4X2Q8NGF9 303 aa13.22□□□□□ -0.29
RPL28-209ENST00000560055 FBXO7Q9Y3I1 522 aa13.22□□□□□ -0.29
RPL28-209ENST00000560055 AKAIN1P0CW23 69 aa13.21□□□□□ -0.29
RPL28-209ENST00000560055 EGR2P11161 476 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms