RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 NOTCH3Q9UM47 2321 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 PKD1L1Q8TDX9 2849 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 IGKV1D-8A0A087WSZ0 117 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 A0A0G2JLM5 398 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 ADARB2-AS1A8MUL3 147 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 G3V318 75 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 G3V4G9 280 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 CCL24O00175 119 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 RGS5O15539 181 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 SSX5O60225 188 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 FCGR3BO75015 233 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 PROP1O75360 226 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 GABARAPO95166 117 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 CRYZL1O95825 349 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 CA2P00918 260 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 HRASP01112 189 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 PPYP01298 95 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 HLA-DQB1P01920 261 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 RPLP1P05386 114 aaKnown RBP3.43□□□□□ -1.86
SNX1-205ENST00000559339 OR8U8P0C7N1 319 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 ZNF182P17025 639 aaPredicted RBP3.43□□□□□ -1.86
SNX1-205ENST00000559339 PPIFP30405 207 aaKnown RBP3.43□□□□□ -1.86
SNX1-205ENST00000559339 DUTP33316 252 aaKnown RBP3.43□□□□□ -1.86
SNX1-205ENST00000559339 MYCNOSP40205 109 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 KIR2DS2P43631 304 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 RAB9AP51151 201 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 RAB25P57735 213 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 LINC00205P59089 165 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 TAS2R20P59543 309 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 HERV-K104P61576 105 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 TSPAN5P62079 268 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 GNB1P62873 340 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 CATR1Q13166 79 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 FXYD3Q14802 87 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 CDK10Q15131 360 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 PSG5Q15238 335 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 MSMO1Q15800 293 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 AKIRIN2Q53H80 203 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 LPCAT3Q6P1A2 487 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 UNQ5815/PRO19632Q6UWF5 114 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 ZNF66Q6ZN08 573 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 LCNL1Q6ZST4 164 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 C8orf86Q6ZUL3 223 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 OVCH2Q7RTZ1 564 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 C1QL4Q86Z23 238 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 CMTM1Q8IZ96 169 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 GVQW1Q8N7I0 195 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 RNF152Q8N8N0 203 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 MINDY2Q8NBR6 621 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 ZBTB34Q8NCN2 500 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 BVESQ8NE79 360 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 LFNGQ8NES3 379 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 OR5H2Q8NGV7 314 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 OR6F1Q8NGZ6 308 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 OR4S2Q8NH73 311 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 GRPEL2Q8TAA5 225 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 CD300LFQ8TDQ1 290 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 RAB2BQ8WUD1 216 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 SECTM1Q8WVN6 248 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 TCTEX1D2Q8WW35 142 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 GIMAP1Q8WWP7 306 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 PHB2Q99623 299 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 SLA2Q9H6Q3 261 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 SCPEP1Q9HB40 452 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 TAS2R8Q9NYW2 309 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 EHFQ9NZC4 300 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 ADAM30Q9UKF2 790 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 FOXA2Q9Y261 457 aaPredicted RBP3.43□□□□□ -1.86
SNX1-205ENST00000559339 VSIG4Q9Y279 399 aa3.43□□□□□ -1.86
SNX1-205ENST00000559339 RBMX2Q9Y388 322 aaKnown RBP3.43□□□□□ -1.86
SNX1-205ENST00000559339 MEIS3P1A6NDR6 274 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 LINC00473A8K010 186 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 H3BUA1 57 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 SULT1C2O00338 296 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 FCN1O00602 326 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 MPPED1O15442 326 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 TNFSF12O43508 249 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 HPGDSO60760 199 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 TPPPO94811 219 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 OR2A4O95047 310 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 DHFRP00374 187 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 IGLV1-40P01703 118 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 IFNA6P05013 189 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 EIF4EP06730 217 aaKnown RBP3.42□□□□□ -1.86
SNX1-205ENST00000559339 FCER2P06734 321 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 IGLL1P15814 213 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 ELK1P19419 428 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 AADACP22760 399 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 HLA-DMAP28067 261 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 RPL5P46777 297 aaKnown RBP3.42□□□□□ -1.86
SNX1-205ENST00000559339 RFX2P48378 723 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 CRIP2P52943 208 aaPredicted RBP3.42□□□□□ -1.86
SNX1-205ENST00000559339 TMBIM6P55061 237 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 TPPP2P59282 170 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 FXYD4P59646 89 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 UBE2KP61086 200 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 CFHR3Q02985 330 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 ZNF616Q08AN1 781 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 DYRK1AQ13627 763 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 TNXAQ16473 311 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms