RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 LHFPL5Q8TAF8 219 aa14.57□□□□□ -0.08
CLPX-203ENST00000558958 CFHR4Q92496 578 aa14.57□□□□□ -0.08
CLPX-203ENST00000558958 SHPKQ9UHJ6 478 aa14.57□□□□□ -0.08
CLPX-203ENST00000558958 HIVEP1P15822 2718 aa14.56□□□□□ -0.08
CLPX-203ENST00000558958 IGHV3-72A0A0B4J1Y9 119 aa14.56□□□□□ -0.08
CLPX-203ENST00000558958 LY6G6DO95868 133 aa14.56□□□□□ -0.08
CLPX-203ENST00000558958 RRASP10301 218 aa14.56□□□□□ -0.08
CLPX-203ENST00000558958 RPA2P15927 270 aa14.56□□□□□ -0.08
CLPX-203ENST00000558958 LPAR6P43657 344 aa14.56□□□□□ -0.08
CLPX-203ENST00000558958 SRPXP78539 464 aa14.56□□□□□ -0.08
CLPX-203ENST00000558958 LIN54Q6MZP7 749 aa14.56□□□□□ -0.08
CLPX-203ENST00000558958 C9orf139Q6ZV77 190 aa14.56□□□□□ -0.08
CLPX-203ENST00000558958 PDPNQ86YL7 162 aa14.56□□□□□ -0.08
CLPX-203ENST00000558958 LGI3Q8N145 548 aa14.56□□□□□ -0.08
CLPX-203ENST00000558958 RBMXL1Q96E39 390 aaKnown RBP14.56□□□□□ -0.08
CLPX-203ENST00000558958 WASHC3Q9Y3C0 194 aa14.56□□□□□ -0.08
CLPX-203ENST00000558958 SOX21Q9Y651 276 aaPredicted RBP14.56□□□□□ -0.08
CLPX-203ENST00000558958 hCG_2014768A0A024R1R8 64 aa14.55□□□□□ -0.08
CLPX-203ENST00000558958 H7C2Y5 167 aa14.55□□□□□ -0.08
CLPX-203ENST00000558958 IGKV1-39P01597 117 aa14.55□□□□□ -0.08
CLPX-203ENST00000558958 IGKV1-16P04430 117 aa14.55□□□□□ -0.08
CLPX-203ENST00000558958 IGKV1D-39P04432 117 aa14.55□□□□□ -0.08
CLPX-203ENST00000558958 CD1BP29016 333 aa14.55□□□□□ -0.08
CLPX-203ENST00000558958 RAB13P51153 203 aa14.55□□□□□ -0.08
CLPX-203ENST00000558958 DHRS7BQ6IAN0 325 aaPredicted RBP14.55□□□□□ -0.08
CLPX-203ENST00000558958 SELENOHQ8IZQ5 122 aaKnown RBP14.55□□□□□ -0.08
CLPX-203ENST00000558958 IL22RA2Q969J5 263 aa14.55□□□□□ -0.08
CLPX-203ENST00000558958 MS4A7Q9GZW8 240 aaPredicted RBP14.55□□□□□ -0.08
CLPX-203ENST00000558958 MEGF9Q9H1U4 602 aa14.55□□□□□ -0.08
CLPX-203ENST00000558958 PLEKHA2Q9HB19 425 aa14.55□□□□□ -0.08
CLPX-203ENST00000558958 TMEM160Q9NX00 188 aa14.55□□□□□ -0.08
CLPX-203ENST00000558958 FAM96BQ9Y3D0 163 aa14.55□□□□□ -0.08
CLPX-203ENST00000558958 DBX1A6NMT0 343 aa14.54□□□□□ -0.08
CLPX-203ENST00000558958 SSNA1O43805 119 aa14.54□□□□□ -0.08
CLPX-203ENST00000558958 S1PR2O95136 353 aa14.54□□□□□ -0.08
CLPX-203ENST00000558958 CRYZL1O95825 349 aa14.54□□□□□ -0.08
CLPX-203ENST00000558958 HPRT1P00492 218 aa14.54□□□□□ -0.08
CLPX-203ENST00000558958 ARHGDIBP52566 201 aa14.54□□□□□ -0.08
CLPX-203ENST00000558958 TMEM268Q5VZI3 342 aa14.54□□□□□ -0.08
CLPX-203ENST00000558958 ZNF695Q8IW36 515 aa14.54□□□□□ -0.08
CLPX-203ENST00000558958 CADM3Q8N126 398 aa14.54□□□□□ -0.08
CLPX-203ENST00000558958 UXS1Q8NBZ7 420 aa14.54□□□□□ -0.08
CLPX-203ENST00000558958 RBPMSQ93062 196 aaKnown RBP14.54□□□□□ -0.08
CLPX-203ENST00000558958 ANK3Q12955 4377 aaKnown RBP14.54□□□□□ -0.08
CLPX-203ENST00000558958 VENTXO95231 258 aa14.53□□□□□ -0.08
CLPX-203ENST00000558958 FBP1P09467 338 aa14.53□□□□□ -0.08
CLPX-203ENST00000558958 TMEM177Q53S58 311 aa14.53□□□□□ -0.08
CLPX-203ENST00000558958 IL17RELQ6ZVW7 336 aa14.53□□□□□ -0.08
CLPX-203ENST00000558958 BCL6BQ8N143 479 aaPredicted RBP14.53□□□□□ -0.08
CLPX-203ENST00000558958 MXRA5Q9NR99 2828 aa14.53□□□□□ -0.08
CLPX-203ENST00000558958 FAM90A9PA6NNJ1 464 aa14.52□□□□□ -0.08
CLPX-203ENST00000558958 VGLL3A8MV65 326 aa14.52□□□□□ -0.08
CLPX-203ENST00000558958 LYZL2Q7Z4W2 148 aa14.52□□□□□ -0.08
CLPX-203ENST00000558958 SLC35G3Q8N808 338 aa14.52□□□□□ -0.08
CLPX-203ENST00000558958 OR4C13Q8NGP0 309 aa14.52□□□□□ -0.08
CLPX-203ENST00000558958 OSR1Q8TAX0 266 aaPredicted RBP14.52□□□□□ -0.08
CLPX-203ENST00000558958 FLYWCH2Q96CP2 140 aaKnown RBP14.52□□□□□ -0.08
CLPX-203ENST00000558958 MED28Q9H204 178 aa14.52□□□□□ -0.08
CLPX-203ENST00000558958 COMMD9Q9P000 198 aa14.52□□□□□ -0.08
CLPX-203ENST00000558958 SONP18583 2426 aaKnown RBP14.52□□□□□ -0.08
CLPX-203ENST00000558958 PIGBOS1A0A0B4J2F0 54 aa14.51□□□□□ -0.09
CLPX-203ENST00000558958 DUXBA0A1W2PPF3 345 aa14.51□□□□□ -0.09
CLPX-203ENST00000558958 BRS3P32247 399 aa14.51□□□□□ -0.09
CLPX-203ENST00000558958 DYNLT3P51808 116 aa14.51□□□□□ -0.09
CLPX-203ENST00000558958 RRAS2P62070 204 aaPredicted RBP14.51□□□□□ -0.09
CLPX-203ENST00000558958 C2orf68Q2NKX9 166 aa14.51□□□□□ -0.09
CLPX-203ENST00000558958 CLEC9AQ6UXN8 241 aa14.51□□□□□ -0.09
CLPX-203ENST00000558958 C22orf15Q8WYQ4 148 aa14.51□□□□□ -0.09
CLPX-203ENST00000558958 SEC22AQ96IW7 307 aa14.51□□□□□ -0.09
CLPX-203ENST00000558958 RAB18Q9NP72 206 aa14.51□□□□□ -0.09
CLPX-203ENST00000558958 NAV3Q8IVL0 2385 aa14.51□□□□□ -0.09
CLPX-203ENST00000558958 ADAP1O75689 374 aa14.5□□□□□ -0.09
CLPX-203ENST00000558958 KRASP01116 189 aa14.5□□□□□ -0.09
CLPX-203ENST00000558958 IGKV1D-33P01593 117 aa14.5□□□□□ -0.09
CLPX-203ENST00000558958 IGKV1-33P01594 117 aa14.5□□□□□ -0.09
CLPX-203ENST00000558958 IGKV1-5P01602 117 aa14.5□□□□□ -0.09
CLPX-203ENST00000558958 SNRNP70P08621 437 aaKnown RBP14.5□□□□□ -0.09
CLPX-203ENST00000558958 HOXB5P09067 269 aa14.5□□□□□ -0.09
CLPX-203ENST00000558958 NQO2P16083 231 aa14.5□□□□□ -0.09
CLPX-203ENST00000558958 HNF1AP20823 631 aa14.5□□□□□ -0.09
CLPX-203ENST00000558958 CD24P25063 80 aa14.5□□□□□ -0.09
CLPX-203ENST00000558958 EBI3Q14213 229 aa14.5□□□□□ -0.09
CLPX-203ENST00000558958 DEFB112Q30KQ8 113 aa14.5□□□□□ -0.09
CLPX-203ENST00000558958 THNSL2Q86YJ6 484 aa14.5□□□□□ -0.09
CLPX-203ENST00000558958 R3HDM4Q96D70 268 aa14.5□□□□□ -0.09
CLPX-203ENST00000558958 RITA1Q96K30 269 aa14.5□□□□□ -0.09
CLPX-203ENST00000558958 MARCH11A6NNE9 402 aa14.5□□□□□ -0.09
CLPX-203ENST00000558958 SRRM4A7MD48 611 aaKnown RBP14.5□□□□□ -0.09
CLPX-203ENST00000558958 SHOXO15266 292 aa14.5□□□□□ -0.09
CLPX-203ENST00000558958 ATG12O94817 140 aa14.5□□□□□ -0.09
CLPX-203ENST00000558958 MOSP00540 346 aa14.5□□□□□ -0.09
CLPX-203ENST00000558958 HRASP01112 189 aa14.5□□□□□ -0.09
CLPX-203ENST00000558958 SULT1A3P0DMM9 295 aa14.5□□□□□ -0.09
CLPX-203ENST00000558958 SULT1A4P0DMN0 295 aa14.5□□□□□ -0.09
CLPX-203ENST00000558958 HLA-GP17693 338 aa14.5□□□□□ -0.09
CLPX-203ENST00000558958 VDAC1P21796 283 aa14.5□□□□□ -0.09
CLPX-203ENST00000558958 G6PCP35575 357 aa14.5□□□□□ -0.09
CLPX-203ENST00000558958 SRP14P37108 136 aaKnown RBP14.5□□□□□ -0.09
CLPX-203ENST00000558958 BCAP31P51572 246 aa14.5□□□□□ -0.09
CLPX-203ENST00000558958 RPS16P62249 146 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms