RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 TMED4Q7Z7H5 227 aa12.69□□□□□ -0.38
CDC42BPB-203ENST00000558867 C12orf45Q8N5I9 185 aaPredicted RBP12.69□□□□□ -0.38
CDC42BPB-203ENST00000558867 COMMD1Q8N668 190 aa12.69□□□□□ -0.38
CDC42BPB-203ENST00000558867 OR4A4PQ8NGN8 299 aa12.69□□□□□ -0.38
CDC42BPB-203ENST00000558867 ZFAND1Q8TCF1 268 aa12.69□□□□□ -0.38
CDC42BPB-203ENST00000558867 NEK7Q8TDX7 302 aa12.69□□□□□ -0.38
CDC42BPB-203ENST00000558867 MITD1Q8WV92 249 aa12.69□□□□□ -0.38
CDC42BPB-203ENST00000558867 ZNF486Q96H40 463 aaPredicted RBP12.69□□□□□ -0.38
CDC42BPB-203ENST00000558867 ZNF2Q9BSG1 426 aaPredicted RBP12.69□□□□□ -0.38
CDC42BPB-203ENST00000558867 ZNF436Q9C0F3 470 aaPredicted RBP12.69□□□□□ -0.38
CDC42BPB-203ENST00000558867 C5orf66Q9H5L9 145 aa12.69□□□□□ -0.38
CDC42BPB-203ENST00000558867 DSCAML1Q8TD84 2053 aa12.68□□□□□ -0.38
CDC42BPB-203ENST00000558867 C9orf170A2RU37 121 aa12.68□□□□□ -0.38
CDC42BPB-203ENST00000558867 FABP7O15540 132 aa12.68□□□□□ -0.38
CDC42BPB-203ENST00000558867 RAP2BP61225 183 aa12.68□□□□□ -0.38
CDC42BPB-203ENST00000558867 HLA-DRB3P79483 266 aa12.68□□□□□ -0.38
CDC42BPB-203ENST00000558867 C10orf99Q6UWK7 81 aa12.68□□□□□ -0.38
CDC42BPB-203ENST00000558867 TCF23Q7RTU1 214 aa12.68□□□□□ -0.38
CDC42BPB-203ENST00000558867 TPRX1Q8N7U7 411 aa12.68□□□□□ -0.38
CDC42BPB-203ENST00000558867 KLHL30-AS1Q8NEE0 82 aa12.68□□□□□ -0.38
CDC42BPB-203ENST00000558867 OR52B4Q8NGK2 314 aa12.68□□□□□ -0.38
CDC42BPB-203ENST00000558867 MOB3AQ96BX8 217 aa12.68□□□□□ -0.38
CDC42BPB-203ENST00000558867 HYLS1Q96M11 299 aa12.68□□□□□ -0.38
CDC42BPB-203ENST00000558867 RTBDNQ9BSG5 229 aaPredicted RBP12.68□□□□□ -0.38
CDC42BPB-203ENST00000558867 NCOR1P1Q9H4R4 102 aa12.68□□□□□ -0.38
CDC42BPB-203ENST00000558867 MGAT4CQ9UBM8 478 aa12.68□□□□□ -0.38
CDC42BPB-203ENST00000558867 SLC23A1Q9UHI7 598 aa12.68□□□□□ -0.38
CDC42BPB-203ENST00000558867 MOB4Q9Y3A3 225 aa12.68□□□□□ -0.38
CDC42BPB-203ENST00000558867 TUSC2O75896 110 aa12.67□□□□□ -0.38
CDC42BPB-203ENST00000558867 SNAPC5O75971 98 aa12.67□□□□□ -0.38
CDC42BPB-203ENST00000558867 RGS11O94810 467 aa12.67□□□□□ -0.38
CDC42BPB-203ENST00000558867 HLA-AP01891 365 aaKnown RBP12.67□□□□□ -0.38
CDC42BPB-203ENST00000558867 GSTT2P0CG29 244 aa12.67□□□□□ -0.38
CDC42BPB-203ENST00000558867 P2RX3P56373 397 aa12.67□□□□□ -0.38
CDC42BPB-203ENST00000558867 PPP1R1AQ13522 171 aa12.67□□□□□ -0.38
CDC42BPB-203ENST00000558867 HEPN1Q6WQI6 88 aa12.67□□□□□ -0.38
CDC42BPB-203ENST00000558867 ETV3LQ6ZN32 361 aa12.67□□□□□ -0.38
CDC42BPB-203ENST00000558867 C8orf86Q6ZUL3 223 aa12.67□□□□□ -0.38
CDC42BPB-203ENST00000558867 PLPPR1Q8TBJ4 325 aa12.67□□□□□ -0.38
CDC42BPB-203ENST00000558867 TMEM230Q96A57 120 aa12.67□□□□□ -0.38
CDC42BPB-203ENST00000558867 FXYD6Q9H0Q3 95 aa12.67□□□□□ -0.38
CDC42BPB-203ENST00000558867 TAS2R3Q9NYW6 316 aa12.67□□□□□ -0.38
CDC42BPB-203ENST00000558867 C14orf166Q9Y224 244 aaKnown RBP12.67□□□□□ -0.38
CDC42BPB-203ENST00000558867 DBX1A6NMT0 343 aa12.66□□□□□ -0.38
CDC42BPB-203ENST00000558867 SIRPB1O00241 398 aa12.66□□□□□ -0.38
CDC42BPB-203ENST00000558867 SFT2D2O95562 160 aa12.66□□□□□ -0.38
CDC42BPB-203ENST00000558867 AMY1AP04745 511 aa12.66□□□□□ -0.38
CDC42BPB-203ENST00000558867 HMGN3Q15651 99 aa12.66□□□□□ -0.38
CDC42BPB-203ENST00000558867 TPTE2P1Q5T6R2 138 aa12.66□□□□□ -0.38
CDC42BPB-203ENST00000558867 ZNF329Q86UD4 541 aa12.66□□□□□ -0.38
CDC42BPB-203ENST00000558867 THNSL2Q86YJ6 484 aa12.66□□□□□ -0.38
CDC42BPB-203ENST00000558867 ZNF695Q8IW36 515 aa12.66□□□□□ -0.38
CDC42BPB-203ENST00000558867 ADAD2Q8NCV1 583 aaKnown RBP12.66□□□□□ -0.38
CDC42BPB-203ENST00000558867 P2RX4Q99571 388 aa12.66□□□□□ -0.38
CDC42BPB-203ENST00000558867 PHB2Q99623 299 aa12.66□□□□□ -0.38
CDC42BPB-203ENST00000558867 PIPOXQ9P0Z9 390 aa12.66□□□□□ -0.38
CDC42BPB-203ENST00000558867 TRBV6-7A0A0A0MS04 114 aa12.65□□□□□ -0.38
CDC42BPB-203ENST00000558867 TMEM30CPA0ZSE6 113 aa12.65□□□□□ -0.38
CDC42BPB-203ENST00000558867 SH2D7A6NKC9 451 aaPredicted RBP12.65□□□□□ -0.38
CDC42BPB-203ENST00000558867 BUB1B-PAK6H3BSN5 160 aa12.65□□□□□ -0.38
CDC42BPB-203ENST00000558867 PSPNO60542 156 aa12.65□□□□□ -0.38
CDC42BPB-203ENST00000558867 IGLV1-47P01700 117 aa12.65□□□□□ -0.38
CDC42BPB-203ENST00000558867 CD34P28906 385 aa12.65□□□□□ -0.38
CDC42BPB-203ENST00000558867 FCGR2CP31995 323 aa12.65□□□□□ -0.38
CDC42BPB-203ENST00000558867 OR3A1P47881 315 aa12.65□□□□□ -0.38
CDC42BPB-203ENST00000558867 HLA-DRB5Q30154 266 aa12.65□□□□□ -0.38
CDC42BPB-203ENST00000558867 C9orf66Q5T8R8 295 aa12.65□□□□□ -0.38
CDC42BPB-203ENST00000558867 PRAMEF5Q5TYX0 476 aa12.65□□□□□ -0.38
CDC42BPB-203ENST00000558867 TRAT1Q6PIZ9 186 aa12.65□□□□□ -0.38
CDC42BPB-203ENST00000558867 FOXRED2Q8IWF2 684 aa12.65□□□□□ -0.38
CDC42BPB-203ENST00000558867 SLC38A6Q8IZM9 456 aa12.65□□□□□ -0.38
CDC42BPB-203ENST00000558867 OR5M8Q8NGP6 311 aa12.65□□□□□ -0.38
CDC42BPB-203ENST00000558867 RSRP1Q9BUV0 290 aa12.65□□□□□ -0.38
CDC42BPB-203ENST00000558867 TOLLIPQ9H0E2 274 aa12.65□□□□□ -0.38
CDC42BPB-203ENST00000558867 AMMECR1Q9Y4X0 333 aaPredicted RBP12.65□□□□□ -0.38
CDC42BPB-203ENST00000558867 STAB2Q8WWQ8 2551 aa12.65□□□□□ -0.39
CDC42BPB-203ENST00000558867 CRYM-AS1A6NIL9 109 aa12.64□□□□□ -0.39
CDC42BPB-203ENST00000558867 HSPB6O14558 160 aa12.64□□□□□ -0.39
CDC42BPB-203ENST00000558867 MMP23AO75900 390 aa12.64□□□□□ -0.39
CDC42BPB-203ENST00000558867 SLC22A5O76082 557 aa12.64□□□□□ -0.39
CDC42BPB-203ENST00000558867 PPYP01298 95 aa12.64□□□□□ -0.39
CDC42BPB-203ENST00000558867 PGAM2P15259 253 aa12.64□□□□□ -0.39
CDC42BPB-203ENST00000558867 HERV-K104P61576 105 aa12.64□□□□□ -0.39
CDC42BPB-203ENST00000558867 RND3P61587 244 aa12.64□□□□□ -0.39
CDC42BPB-203ENST00000558867 SUPT4H1P63272 117 aaKnown RBP12.64□□□□□ -0.39
CDC42BPB-203ENST00000558867 CORO2AQ92828 525 aa12.64□□□□□ -0.39
CDC42BPB-203ENST00000558867 RPEQ96AT9 228 aa12.64□□□□□ -0.39
CDC42BPB-203ENST00000558867 GALNT14Q96FL9 552 aa12.64□□□□□ -0.39
CDC42BPB-203ENST00000558867 GON7Q9BXV9 100 aa12.64□□□□□ -0.39
CDC42BPB-203ENST00000558867 LSM4Q9Y4Z0 139 aaKnown RBP12.64□□□□□ -0.39
CDC42BPB-203ENST00000558867 IGKV1-6A0A0C4DH72 117 aa12.63□□□□□ -0.39
CDC42BPB-203ENST00000558867 CCL24O00175 119 aa12.63□□□□□ -0.39
CDC42BPB-203ENST00000558867 SCTP09683 121 aa12.63□□□□□ -0.39
CDC42BPB-203ENST00000558867 AKR1C4P17516 323 aa12.63□□□□□ -0.39
CDC42BPB-203ENST00000558867 HES1Q14469 280 aa12.63□□□□□ -0.39
CDC42BPB-203ENST00000558867 IGSF11Q5DX21 431 aa12.63□□□□□ -0.39
CDC42BPB-203ENST00000558867 LY6G6FQ5SQ64 297 aa12.63□□□□□ -0.39
CDC42BPB-203ENST00000558867 TEX38Q6PEX7 206 aa12.63□□□□□ -0.39
CDC42BPB-203ENST00000558867 H1FOOQ8IZA3 346 aaPredicted RBP12.63□□□□□ -0.39
CDC42BPB-203ENST00000558867 MUC7Q8TAX7 377 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms