RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 DERL1Q9BUN8 251 aa9.89□□□□□ -0.83
VIPAS39-211ENST00000557658 HES7Q9BYE0 225 aa9.89□□□□□ -0.83
VIPAS39-211ENST00000557658 TTTY12Q9BZ98 90 aa9.89□□□□□ -0.83
VIPAS39-211ENST00000557658 C12orf49Q9H741 205 aa9.89□□□□□ -0.83
VIPAS39-211ENST00000557658 WDFY3Q8IZQ1 3526 aa9.89□□□□□ -0.83
VIPAS39-211ENST00000557658 TMEM210A6NLX4 147 aa9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 ZNF705FA8MVS1 300 aaPredicted RBP9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 IFNL4K9M1U5 179 aa9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 PSPNO60542 156 aa9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 ZNF705DP0CH99 300 aaPredicted RBP9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 ZNF705BP0CI00 300 aaPredicted RBP9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 BMP5P22003 454 aa9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 CEBPDP49716 269 aaPredicted RBP9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 GCSAMLQ5JQS6 135 aa9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 ABHD17BQ5VST6 288 aa9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 SLC35E4Q6ICL7 350 aa9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 Q8N7P7 452 aa9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 CHODLQ9H9P2 273 aa9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 PCSK5Q92824 1860 aa9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 CACNA1DQ01668 2161 aa9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 IGHV3-64DA0A0J9YX35 117 aa9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 C15orf62A8K5M9 175 aa9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 MPDU1O75352 247 aa9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 GRPP07492 148 aa9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 KITLGP21583 273 aa9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 EDDM3BP56851 147 aa9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 YPEL3P61236 119 aaPredicted RBP9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 MRPL49Q13405 166 aaKnown RBP9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 OR1C1Q15619 314 aa9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 GABRA6Q16445 453 aa9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 TDHQ8IZJ6 230 aa9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 WDR31Q8NA23 367 aa9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 CMTM2Q8TAZ6 248 aa9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 OR2J1Q9GZK6 312 aa9.88□□□□□ -0.83
VIPAS39-211ENST00000557658 RAB4AP20338 218 aa9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 ADMP35318 185 aa9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 UBE2NP61088 152 aaKnown RBP9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 PLGLB1Q02325 96 aa9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 FAM53AQ6NSI3 398 aaPredicted RBP9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 TIPARPQ7Z3E1 657 aaKnown RBP9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 TMEM251Q8N6I4 163 aa9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 ZNF114Q8NC26 417 aa9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 ZCCHC14Q8WYQ9 949 aaKnown RBP9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 HLA-CQ95604 372 aa9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 TBX15Q96SF7 602 aa9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 HSD17B10Q99714 261 aaKnown RBP9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 ZDHHC11Q9H8X9 412 aa9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 ABI3Q9P2A4 366 aa9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 GTF3C1Q12789 2109 aa9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 A0A1B0GUS0 222 aa9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 PGPEP1LA6NFU8 196 aa9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 MARCH11A6NNE9 402 aa9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 RBFOX2O43251 390 aaKnown RBP eCLIP9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 NUPR1O60356 82 aa9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 SMPD2O60906 423 aa9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 TDGF1P3P51864 188 aa9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 RPP30P78346 268 aaKnown RBP9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 AESQ08117 197 aa9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 C3AR1Q16581 482 aa9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 ZNF766Q5HY98 468 aa9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 QTRT1Q9BXR0 403 aaKnown RBP9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 LOXL2Q9Y4K0 774 aa9.87□□□□□ -0.83
VIPAS39-211ENST00000557658 M0QZK8 103 aa9.86□□□□□ -0.83
VIPAS39-211ENST00000557658 G0S2P27469 103 aa9.86□□□□□ -0.83
VIPAS39-211ENST00000557658 OPRK1P41145 380 aa9.86□□□□□ -0.83
VIPAS39-211ENST00000557658 GABRA2P47869 451 aa9.86□□□□□ -0.83
VIPAS39-211ENST00000557658 TPPP2P59282 170 aa9.86□□□□□ -0.83
VIPAS39-211ENST00000557658 PAFAH1B2P68402 229 aa9.86□□□□□ -0.83
VIPAS39-211ENST00000557658 FBXW9Q5XUX1 488 aa9.86□□□□□ -0.83
VIPAS39-211ENST00000557658 TCF23Q7RTU1 214 aa9.86□□□□□ -0.83
VIPAS39-211ENST00000557658 VASH2Q86V25 355 aa9.86□□□□□ -0.83
VIPAS39-211ENST00000557658 OR10G8Q8NGN5 311 aa9.86□□□□□ -0.83
VIPAS39-211ENST00000557658 PATZ1Q9HBE1 687 aaKnown RBP9.86□□□□□ -0.83
VIPAS39-211ENST00000557658 HES4Q9HCC6 221 aa9.86□□□□□ -0.83
VIPAS39-211ENST00000557658 LINC00473A8K010 186 aa9.86□□□□□ -0.83
VIPAS39-211ENST00000557658 ARL14EPLP0DKL9 152 aa9.86□□□□□ -0.83
VIPAS39-211ENST00000557658 PDLIM3Q53GG5 364 aaPredicted RBP9.86□□□□□ -0.83
VIPAS39-211ENST00000557658 MRGPRDQ8TDS7 321 aa9.86□□□□□ -0.83
VIPAS39-211ENST00000557658 R3HDM4Q96D70 268 aa9.86□□□□□ -0.83
VIPAS39-211ENST00000557658 TMEM68Q96MH6 324 aa9.86□□□□□ -0.83
VIPAS39-211ENST00000557658 TMEM106BQ9NUM4 274 aa9.86□□□□□ -0.83
VIPAS39-211ENST00000557658 FAM186AA6NE01 2351 aa9.85□□□□□ -0.83
VIPAS39-211ENST00000557658 TRAV9-1A0A075B6T8 112 aa9.85□□□□□ -0.83
VIPAS39-211ENST00000557658 PATE3B3GLJ2 98 aa9.85□□□□□ -0.83
VIPAS39-211ENST00000557658 CER1O95813 267 aa9.85□□□□□ -0.83
VIPAS39-211ENST00000557658 CXorf1O96002 111 aa9.85□□□□□ -0.83
VIPAS39-211ENST00000557658 STAG3L2P0CL84 134 aa9.85□□□□□ -0.83
VIPAS39-211ENST00000557658 STAG3L3P0CL85 134 aa9.85□□□□□ -0.83
VIPAS39-211ENST00000557658 TIMP3P35625 211 aa9.85□□□□□ -0.83
VIPAS39-211ENST00000557658 RPL29P47914 159 aaKnown RBP9.85□□□□□ -0.83
VIPAS39-211ENST00000557658 SELENOTP62341 195 aa9.85□□□□□ -0.83
VIPAS39-211ENST00000557658 ZXDAP98168 799 aa9.85□□□□□ -0.83
VIPAS39-211ENST00000557658 ALKBH6Q3KRA9 238 aa9.85□□□□□ -0.83
VIPAS39-211ENST00000557658 MRPL52Q86TS9 123 aaKnown RBP9.85□□□□□ -0.83
VIPAS39-211ENST00000557658 SLC25A40Q8TBP6 338 aa9.85□□□□□ -0.83
VIPAS39-211ENST00000557658 SDSLQ96GA7 329 aa9.85□□□□□ -0.83
VIPAS39-211ENST00000557658 TRBV20OR9-2A0A075B6H5 130 aa9.85□□□□□ -0.83
VIPAS39-211ENST00000557658 IQCF6A8MYZ5 107 aa9.85□□□□□ -0.83
VIPAS39-211ENST00000557658 HPRT1P00492 218 aa9.85□□□□□ -0.83
VIPAS39-211ENST00000557658 OR9G9P0C7N8 305 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms