RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 FIP1L1Q6UN15 594 aaKnown RBP9.53□□□□□ -0.88
SRP54-213ENST00000556994 Q6ZR03 302 aa9.53□□□□□ -0.88
SRP54-213ENST00000556994 TCF23Q7RTU1 214 aa9.53□□□□□ -0.88
SRP54-213ENST00000556994 CISD2Q8N5K1 135 aaKnown RBP9.53□□□□□ -0.88
SRP54-213ENST00000556994 PATZ1Q9HBE1 687 aaKnown RBP9.53□□□□□ -0.88
SRP54-213ENST00000556994 POLDIP2Q9Y2S7 368 aa9.53□□□□□ -0.88
SRP54-213ENST00000556994 TRAPPC1Q9Y5R8 145 aa9.53□□□□□ -0.88
SRP54-213ENST00000556994 TRIOBPQ9H2D6 2365 aa9.53□□□□□ -0.88
SRP54-213ENST00000556994 PPP1CBP62140 327 aa9.53□□□□□ -0.88
SRP54-213ENST00000556994 LPAL2Q16609 132 aa9.53□□□□□ -0.88
SRP54-213ENST00000556994 ACOT6Q3I5F7 207 aaPredicted RBP9.53□□□□□ -0.88
SRP54-213ENST00000556994 KCNIP4Q6PIL6 250 aa9.53□□□□□ -0.88
SRP54-213ENST00000556994 GBGT1Q8N5D6 347 aa9.53□□□□□ -0.88
SRP54-213ENST00000556994 BCL2L2Q92843 193 aaPredicted RBP9.53□□□□□ -0.88
SRP54-213ENST00000556994 TCAPO15273 167 aa9.52□□□□□ -0.89
SRP54-213ENST00000556994 CD82P27701 267 aa9.52□□□□□ -0.89
SRP54-213ENST00000556994 GCH1P30793 250 aa9.52□□□□□ -0.89
SRP54-213ENST00000556994 SSTR5P35346 364 aa9.52□□□□□ -0.89
SRP54-213ENST00000556994 GABRA2P47869 451 aa9.52□□□□□ -0.89
SRP54-213ENST00000556994 EIF4EBP1Q13541 118 aaPredicted RBP9.52□□□□□ -0.89
SRP54-213ENST00000556994 TBC1D28Q2M2D7 210 aa9.52□□□□□ -0.89
SRP54-213ENST00000556994 LRP11Q86VZ4 500 aa9.52□□□□□ -0.89
SRP54-213ENST00000556994 Q8IYB0 196 aa9.52□□□□□ -0.89
SRP54-213ENST00000556994 Q8N7P7 452 aa9.52□□□□□ -0.89
SRP54-213ENST00000556994 SLC25A40Q8TBP6 338 aa9.52□□□□□ -0.89
SRP54-213ENST00000556994 NINJ1Q92982 152 aa9.52□□□□□ -0.89
SRP54-213ENST00000556994 QTRT1Q9BXR0 403 aaKnown RBP9.52□□□□□ -0.89
SRP54-213ENST00000556994 DEFB127Q9H1M4 99 aa9.52□□□□□ -0.89
SRP54-213ENST00000556994 CBLN4Q9NTU7 201 aa9.52□□□□□ -0.89
SRP54-213ENST00000556994 TP53TG5Q9Y2B4 290 aa9.52□□□□□ -0.89
SRP54-213ENST00000556994 SPENQ96T58 3664 aaKnown RBP9.52□□□□□ -0.89
SRP54-213ENST00000556994 KNTC1P50748 2209 aa9.52□□□□□ -0.89
SRP54-213ENST00000556994 TMEM30CPA0ZSE6 113 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 MLNRO43193 412 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 RBFOX2O43251 390 aaKnown RBP eCLIP9.51□□□□□ -0.89
SRP54-213ENST00000556994 SMPD2O60906 423 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 VENTXO95231 258 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 TYMSP04818 313 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 RPL15P61313 204 aaKnown RBP9.51□□□□□ -0.89
SRP54-213ENST00000556994 CATR1Q13166 79 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 ZNF124Q15973 351 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 METRNQ9UJH8 293 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 KMT2EQ8IZD2 1858 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 GRIFINA4D1Z8 144 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 C15orf62A8K5M9 175 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 C17orf112F2Z3M2 114 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 CLDN14O95500 239 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 IGHV3-13P01766 116 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 IGHV3-7P01780 117 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 FOSL1P15407 271 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 PSG7Q13046 419 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 IQCJQ1A5X6 159 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 FBXW9Q5XUX1 488 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 DBX2Q6ZNG2 339 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 BEND2Q8NDZ0 799 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 SGMS2Q8NHU3 365 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 COQ2Q96H96 371 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 DCTN5Q9BTE1 182 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 SNHG12Q9BXW3 62 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 FAM234AQ9H0X4 552 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 OBP2BQ9NPH6 170 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 FKBP11Q9NYL4 201 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 PSG11Q9UQ72 335 aa9.51□□□□□ -0.89
SRP54-213ENST00000556994 TRBV20OR9-2A0A075B6H5 130 aa9.5□□□□□ -0.89
SRP54-213ENST00000556994 A0A1W2PPV4 95 aa9.5□□□□□ -0.89
SRP54-213ENST00000556994 MARCH11A6NNE9 402 aa9.5□□□□□ -0.89
SRP54-213ENST00000556994 RAB29O14966 203 aa9.5□□□□□ -0.89
SRP54-213ENST00000556994 OR9G9P0C7N8 305 aa9.5□□□□□ -0.89
SRP54-213ENST00000556994 G0S2P27469 103 aa9.5□□□□□ -0.89
SRP54-213ENST00000556994 CD1BP29016 333 aa9.5□□□□□ -0.89
SRP54-213ENST00000556994 MPV17P39210 176 aa9.5□□□□□ -0.89
SRP54-213ENST00000556994 THBS3P49746 956 aa9.5□□□□□ -0.89
SRP54-213ENST00000556994 NUTF2P61970 127 aaKnown RBP9.5□□□□□ -0.89
SRP54-213ENST00000556994 LBHQ53QV2 105 aaPredicted RBP9.5□□□□□ -0.89
SRP54-213ENST00000556994 ZNF766Q5HY98 468 aa9.5□□□□□ -0.89
SRP54-213ENST00000556994 VKORC1L1Q8N0U8 176 aa9.5□□□□□ -0.89
SRP54-213ENST00000556994 MRPL37Q9BZE1 423 aaKnown RBP9.5□□□□□ -0.89
SRP54-213ENST00000556994 OOEPA6NGQ2 149 aa9.5□□□□□ -0.89
SRP54-213ENST00000556994 LYZL6O75951 148 aa9.5□□□□□ -0.89
SRP54-213ENST00000556994 CCKARP32238 428 aa9.5□□□□□ -0.89
SRP54-213ENST00000556994 MEOX1P50221 254 aa9.5□□□□□ -0.89
SRP54-213ENST00000556994 SPCS3P61009 180 aa9.5□□□□□ -0.89
SRP54-213ENST00000556994 VWC2Q2TAL6 325 aa9.5□□□□□ -0.89
SRP54-213ENST00000556994 ZBTB34Q8NCN2 500 aa9.5□□□□□ -0.89
SRP54-213ENST00000556994 OR13A1Q8NGR1 328 aa9.5□□□□□ -0.89
SRP54-213ENST00000556994 NANOS1Q8WY41 292 aaKnown RBP9.5□□□□□ -0.89
SRP54-213ENST00000556994 CIB3Q96Q77 187 aaPredicted RBP9.5□□□□□ -0.89
SRP54-213ENST00000556994 IMMP2LQ96T52 175 aa9.5□□□□□ -0.89
SRP54-213ENST00000556994 FOXJ2Q9P0K8 574 aa9.5□□□□□ -0.89
SRP54-213ENST00000556994 FZR1Q9UM11 496 aa9.5□□□□□ -0.89
SRP54-213ENST00000556994 POLR3KQ9Y2Y1 108 aaPredicted RBP9.5□□□□□ -0.89
SRP54-213ENST00000556994 PXMP4Q9Y6I8 212 aa9.5□□□□□ -0.89
SRP54-213ENST00000556994 ZDBF2Q9HCK1 2354 aa9.49□□□□□ -0.89
SRP54-213ENST00000556994 CER1O95813 267 aa9.49□□□□□ -0.89
SRP54-213ENST00000556994 ARL14EPLP0DKL9 152 aa9.49□□□□□ -0.89
SRP54-213ENST00000556994 ADMP35318 185 aa9.49□□□□□ -0.89
SRP54-213ENST00000556994 LCN2P80188 198 aa9.49□□□□□ -0.89
SRP54-213ENST00000556994 PRAMEF6Q5VXH4 476 aa9.49□□□□□ -0.89
SRP54-213ENST00000556994 TMEM144Q7Z5S9 345 aa9.49□□□□□ -0.89
SRP54-213ENST00000556994 SFRP2Q96HF1 295 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms