RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 OR56B1Q8NGI3 324 aa13.87□□□□□ -0.19
VIPAS39-209ENST00000556909 PLEKHA3Q9HB20 300 aa13.87□□□□□ -0.19
VIPAS39-209ENST00000556909 CEPT1Q9Y6K0 416 aa13.87□□□□□ -0.19
VIPAS39-209ENST00000556909 SHISA3A0PJX4 238 aa13.86□□□□□ -0.19
VIPAS39-209ENST00000556909 PTGES3LE9PB15 166 aa13.86□□□□□ -0.19
VIPAS39-209ENST00000556909 EBAG9O00559 213 aa13.86□□□□□ -0.19
VIPAS39-209ENST00000556909 BET1O15155 118 aa13.86□□□□□ -0.19
VIPAS39-209ENST00000556909 FCGR3AP08637 254 aa13.86□□□□□ -0.19
VIPAS39-209ENST00000556909 OR9G9P0C7N8 305 aa13.86□□□□□ -0.19
VIPAS39-209ENST00000556909 RPS25P62851 125 aaKnown RBP13.86□□□□□ -0.19
VIPAS39-209ENST00000556909 TAGLNQ01995 201 aaKnown RBP13.86□□□□□ -0.19
VIPAS39-209ENST00000556909 LINC00322Q6ZN03 302 aaPredicted RBP13.86□□□□□ -0.19
VIPAS39-209ENST00000556909 OR2K2Q8NGT1 345 aa13.86□□□□□ -0.19
VIPAS39-209ENST00000556909 SNAPC3Q92966 411 aa13.86□□□□□ -0.19
VIPAS39-209ENST00000556909 FAM110AQ9BQ89 295 aa13.86□□□□□ -0.19
VIPAS39-209ENST00000556909 HIPK2Q9H2X6 1198 aa13.86□□□□□ -0.19
VIPAS39-209ENST00000556909 PEMTQ9UBM1 199 aa13.86□□□□□ -0.19
VIPAS39-209ENST00000556909 TRBV6-7A0A0A0MS04 114 aa13.85□□□□□ -0.19
VIPAS39-209ENST00000556909 A0A0B4J203 849 aa13.85□□□□□ -0.19
VIPAS39-209ENST00000556909 MSGN1A6NI15 193 aa13.85□□□□□ -0.19
VIPAS39-209ENST00000556909 BMPR1BO00238 502 aa13.85□□□□□ -0.19
VIPAS39-209ENST00000556909 JTBO76095 146 aa13.85□□□□□ -0.19
VIPAS39-209ENST00000556909 GSTT2P0CG29 244 aa13.85□□□□□ -0.19
VIPAS39-209ENST00000556909 GSTT2BP0CG30 244 aa13.85□□□□□ -0.19
VIPAS39-209ENST00000556909 CD81P60033 236 aa13.85□□□□□ -0.19
VIPAS39-209ENST00000556909 PLA2G7Q13093 441 aa13.85□□□□□ -0.19
VIPAS39-209ENST00000556909 IRF3Q14653 427 aa13.85□□□□□ -0.19
VIPAS39-209ENST00000556909 TNXAQ16473 311 aa13.85□□□□□ -0.19
VIPAS39-209ENST00000556909 PRSS8Q16651 343 aa13.85□□□□□ -0.19
VIPAS39-209ENST00000556909 IDO2Q6ZQW0 420 aa13.85□□□□□ -0.19
VIPAS39-209ENST00000556909 OR10J5Q8NHC4 309 aa13.85□□□□□ -0.19
VIPAS39-209ENST00000556909 SRSF12Q8WXF0 261 aaKnown RBP13.85□□□□□ -0.19
VIPAS39-209ENST00000556909 DDB2Q92466 427 aa13.85□□□□□ -0.19
VIPAS39-209ENST00000556909 FAM3DQ96BQ1 224 aa13.85□□□□□ -0.19
VIPAS39-209ENST00000556909 ZNF230Q9UIE0 474 aaPredicted RBP13.85□□□□□ -0.19
VIPAS39-209ENST00000556909 KCNK7Q9Y2U2 307 aa13.85□□□□□ -0.19
VIPAS39-209ENST00000556909 TMEM272A0A1B0GTI8 110 aa13.84□□□□□ -0.19
VIPAS39-209ENST00000556909 DENRO43583 198 aaKnown RBP13.84□□□□□ -0.19
VIPAS39-209ENST00000556909 AIREO43918 545 aa13.84□□□□□ -0.19
VIPAS39-209ENST00000556909 ARL6IP5O75915 188 aa13.84□□□□□ -0.19
VIPAS39-209ENST00000556909 DIRAS3O95661 229 aa13.84□□□□□ -0.19
VIPAS39-209ENST00000556909 RRASP10301 218 aa13.84□□□□□ -0.19
VIPAS39-209ENST00000556909 UBE2KP61086 200 aa13.84□□□□□ -0.19
VIPAS39-209ENST00000556909 MRPS15P82914 257 aaKnown RBP13.84□□□□□ -0.19
VIPAS39-209ENST00000556909 RHOGP84095 191 aa13.84□□□□□ -0.19
VIPAS39-209ENST00000556909 EXOSC2Q13868 293 aaKnown RBP13.84□□□□□ -0.19
VIPAS39-209ENST00000556909 C2orf76Q3KRA6 126 aa13.84□□□□□ -0.19
VIPAS39-209ENST00000556909 VMA21Q3ZAQ7 101 aa13.84□□□□□ -0.19
VIPAS39-209ENST00000556909 CD300EQ496F6 205 aaPredicted RBP13.84□□□□□ -0.19
VIPAS39-209ENST00000556909 LAX1Q8IWV1 398 aa13.84□□□□□ -0.19
VIPAS39-209ENST00000556909 TEX45Q8NA69 505 aa13.84□□□□□ -0.19
VIPAS39-209ENST00000556909 NEURL2Q9BR09 285 aa13.84□□□□□ -0.19
VIPAS39-209ENST00000556909 AKIP1Q9NQ31 210 aa13.84□□□□□ -0.19
VIPAS39-209ENST00000556909 NKX1-2Q9UD57 310 aaPredicted RBP13.84□□□□□ -0.19
VIPAS39-209ENST00000556909 FAM223BA6NKX1 122 aa13.83□□□□□ -0.2
VIPAS39-209ENST00000556909 CASQ2O14958 399 aaPredicted RBP13.83□□□□□ -0.2
VIPAS39-209ENST00000556909 MPPED1O15442 326 aa13.83□□□□□ -0.2
VIPAS39-209ENST00000556909 TPPPO94811 219 aa13.83□□□□□ -0.2
VIPAS39-209ENST00000556909 CRYZL1O95825 349 aa13.83□□□□□ -0.2
VIPAS39-209ENST00000556909 PRH1P02810 166 aa13.83□□□□□ -0.2
VIPAS39-209ENST00000556909 CALRP27797 417 aaKnown RBP13.83□□□□□ -0.2
VIPAS39-209ENST00000556909 ZNF45Q02386 682 aa13.83□□□□□ -0.2
VIPAS39-209ENST00000556909 TPBGQ13641 420 aa13.83□□□□□ -0.2
VIPAS39-209ENST00000556909 FAM223AQ8IWN6 122 aa13.83□□□□□ -0.2
VIPAS39-209ENST00000556909 ACOT12Q8WYK0 555 aa13.83□□□□□ -0.2
VIPAS39-209ENST00000556909 MAFIPQ8WZ33 124 aa13.83□□□□□ -0.2
VIPAS39-209ENST00000556909 RAB3CQ96E17 227 aa13.83□□□□□ -0.2
VIPAS39-209ENST00000556909 TRBV9A0A0B4J1U6 114 aa13.82□□□□□ -0.2
VIPAS39-209ENST00000556909 HSMCR30P0CW71 290 aa13.82□□□□□ -0.2
VIPAS39-209ENST00000556909 DUTP33316 252 aaKnown RBP13.82□□□□□ -0.2
VIPAS39-209ENST00000556909 TRAM1Q15629 374 aa13.82□□□□□ -0.2
VIPAS39-209ENST00000556909 HES5Q5TA89 166 aa13.82□□□□□ -0.2
VIPAS39-209ENST00000556909 IL17DQ8TAD2 202 aa13.82□□□□□ -0.2
VIPAS39-209ENST00000556909 ADTRPQ96IZ2 230 aa13.82□□□□□ -0.2
VIPAS39-209ENST00000556909 WFDC10AQ9H1F0 79 aa13.82□□□□□ -0.2
VIPAS39-209ENST00000556909 SCN3BQ9NY72 215 aa13.82□□□□□ -0.2
VIPAS39-209ENST00000556909 RBM7Q9Y580 266 aaKnown RBP13.82□□□□□ -0.2
VIPAS39-209ENST00000556909 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.81□□□□□ -0.2
VIPAS39-209ENST00000556909 RBMY1BA6NDE4 496 aaKnown RBP13.81□□□□□ -0.2
VIPAS39-209ENST00000556909 RBMY1EA6NEQ0 496 aaKnown RBP13.81□□□□□ -0.2
VIPAS39-209ENST00000556909 LINC00473A8K010 186 aa13.81□□□□□ -0.2
VIPAS39-209ENST00000556909 MFNGO00587 321 aa13.81□□□□□ -0.2
VIPAS39-209ENST00000556909 CD7P09564 240 aa13.81□□□□□ -0.2
VIPAS39-209ENST00000556909 RBMY1DP0C7P1 496 aaKnown RBP13.81□□□□□ -0.2
VIPAS39-209ENST00000556909 GNB3P16520 340 aa13.81□□□□□ -0.2
VIPAS39-209ENST00000556909 PSMA1P25786 263 aaKnown RBP13.81□□□□□ -0.2
VIPAS39-209ENST00000556909 ATP5G2Q06055 141 aa13.81□□□□□ -0.2
VIPAS39-209ENST00000556909 DEFB125Q8N687 156 aa13.81□□□□□ -0.2
VIPAS39-209ENST00000556909 OSR1Q8TAX0 266 aaPredicted RBP13.81□□□□□ -0.2
VIPAS39-209ENST00000556909 DYNLRB2Q8TF09 96 aa13.81□□□□□ -0.2
VIPAS39-209ENST00000556909 GINS4Q9BRT9 223 aa13.81□□□□□ -0.2
VIPAS39-209ENST00000556909 ZNF430Q9H8G1 570 aaPredicted RBP13.81□□□□□ -0.2
VIPAS39-209ENST00000556909 SLC2A8Q9NY64 477 aa13.81□□□□□ -0.2
VIPAS39-209ENST00000556909 RAB22AQ9UL26 194 aa13.81□□□□□ -0.2
VIPAS39-209ENST00000556909 V9GY05 133 aa13.81□□□□□ -0.2
VIPAS39-209ENST00000556909 ZNF785A8K8V0 405 aa13.8□□□□□ -0.2
VIPAS39-209ENST00000556909 TUSC2O75896 110 aa13.8□□□□□ -0.2
VIPAS39-209ENST00000556909 EDN2P20800 178 aa13.8□□□□□ -0.2
VIPAS39-209ENST00000556909 FABP5Q01469 135 aa13.8□□□□□ -0.2
VIPAS39-209ENST00000556909 MLLT11Q13015 90 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms