RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 CMTM3Q96MX0 182 aa11.11□□□□□ -0.63
SLIRP-207ENST00000556831 OR51J1Q9H342 316 aa11.11□□□□□ -0.63
SLIRP-207ENST00000556831 ZFP57Q9NU63 452 aa11.11□□□□□ -0.63
SLIRP-207ENST00000556831 ADAM30Q9UKF2 790 aa11.11□□□□□ -0.63
SLIRP-207ENST00000556831 PRELID3BQ9Y3B1 194 aa11.11□□□□□ -0.63
SLIRP-207ENST00000556831 BIRC6Q9NR09 4857 aa11.1□□□□□ -0.63
SLIRP-207ENST00000556831 IGKV1-16P04430 117 aa11.1□□□□□ -0.63
SLIRP-207ENST00000556831 IGF1P05019 195 aa11.1□□□□□ -0.63
SLIRP-207ENST00000556831 FCER2P06734 321 aa11.1□□□□□ -0.63
SLIRP-207ENST00000556831 CD33P20138 364 aa11.1□□□□□ -0.63
SLIRP-207ENST00000556831 PTBP1P26599 531 aaKnown RBP eCLIP11.1□□□□□ -0.63
SLIRP-207ENST00000556831 SLC6A1P30531 599 aa11.1□□□□□ -0.63
SLIRP-207ENST00000556831 LGALS7P47929 136 aa11.1□□□□□ -0.63
SLIRP-207ENST00000556831 TAS2R46P59540 309 aa11.1□□□□□ -0.63
SLIRP-207ENST00000556831 KCTD9Q7L273 389 aa11.1□□□□□ -0.63
SLIRP-207ENST00000556831 POC5Q8NA72 575 aa11.1□□□□□ -0.63
SLIRP-207ENST00000556831 KLHL30-AS1Q8NEE0 82 aa11.1□□□□□ -0.63
SLIRP-207ENST00000556831 RITA1Q96K30 269 aa11.1□□□□□ -0.63
SLIRP-207ENST00000556831 TRAV41A0A0B4J266 112 aa11.09□□□□□ -0.63
SLIRP-207ENST00000556831 LINC01548A6NM66 108 aa11.09□□□□□ -0.63
SLIRP-207ENST00000556831 ADARB2-AS1A8MUL3 147 aa11.09□□□□□ -0.63
SLIRP-207ENST00000556831 ATP6V0E1O15342 81 aa11.09□□□□□ -0.63
SLIRP-207ENST00000556831 HLA-DQB1P01920 261 aa11.09□□□□□ -0.63
SLIRP-207ENST00000556831 EIF4EP06730 217 aaKnown RBP11.09□□□□□ -0.63
SLIRP-207ENST00000556831 ELANEP08246 267 aa11.09□□□□□ -0.63
SLIRP-207ENST00000556831 PTHLHP12272 177 aa11.09□□□□□ -0.63
SLIRP-207ENST00000556831 FCGR2CP31995 323 aa11.09□□□□□ -0.63
SLIRP-207ENST00000556831 HERV-K104P61576 105 aa11.09□□□□□ -0.63
SLIRP-207ENST00000556831 RPL23AP62750 156 aaKnown RBP11.09□□□□□ -0.63
SLIRP-207ENST00000556831 TMEM267Q0VDI3 215 aaPredicted RBP11.09□□□□□ -0.63
SLIRP-207ENST00000556831 FOXE3Q13461 319 aa11.09□□□□□ -0.63
SLIRP-207ENST00000556831 CDK10Q15131 360 aa11.09□□□□□ -0.63
SLIRP-207ENST00000556831 PSG5Q15238 335 aa11.09□□□□□ -0.63
SLIRP-207ENST00000556831 ECSCRQ19T08 205 aa11.09□□□□□ -0.63
SLIRP-207ENST00000556831 VMA21Q3ZAQ7 101 aa11.09□□□□□ -0.63
SLIRP-207ENST00000556831 TCTEX1D4Q5JR98 221 aa11.09□□□□□ -0.63
SLIRP-207ENST00000556831 ZNF660Q6AZW8 331 aaPredicted RBP11.09□□□□□ -0.63
SLIRP-207ENST00000556831 CCDC190Q86UF4 302 aa11.09□□□□□ -0.63
SLIRP-207ENST00000556831 LYSMD2Q8IV50 215 aa11.09□□□□□ -0.63
SLIRP-207ENST00000556831 BVESQ8NE79 360 aa11.09□□□□□ -0.63
SLIRP-207ENST00000556831 OR5AP2Q8NGF4 316 aa11.09□□□□□ -0.63
SLIRP-207ENST00000556831 OR5H2Q8NGV7 314 aa11.09□□□□□ -0.63
SLIRP-207ENST00000556831 CHAC2Q8WUX2 184 aa11.09□□□□□ -0.63
SLIRP-207ENST00000556831 SECTM1Q8WVN6 248 aa11.09□□□□□ -0.63
SLIRP-207ENST00000556831 CLCC1Q96S66 551 aa11.09□□□□□ -0.63
SLIRP-207ENST00000556831 EHFQ9NZC4 300 aa11.09□□□□□ -0.63
SLIRP-207ENST00000556831 ZNF580Q9UK33 172 aa11.09□□□□□ -0.63
SLIRP-207ENST00000556831 IGHV7-81A0A0B4J1V7 117 aa11.08□□□□□ -0.64
SLIRP-207ENST00000556831 RGS5O15539 181 aa11.08□□□□□ -0.64
SLIRP-207ENST00000556831 SLC25A17O43808 307 aa11.08□□□□□ -0.64
SLIRP-207ENST00000556831 CREBL2O60519 120 aaPredicted RBP11.08□□□□□ -0.64
SLIRP-207ENST00000556831 HPGDSO60760 199 aa11.08□□□□□ -0.64
SLIRP-207ENST00000556831 CNIH1O95406 144 aa11.08□□□□□ -0.64
SLIRP-207ENST00000556831 CRYZL1O95825 349 aa11.08□□□□□ -0.64
SLIRP-207ENST00000556831 CA2P00918 260 aa11.08□□□□□ -0.64
SLIRP-207ENST00000556831 DUTP33316 252 aaKnown RBP11.08□□□□□ -0.64
SLIRP-207ENST00000556831 FXYD4P59646 89 aa11.08□□□□□ -0.64
SLIRP-207ENST00000556831 GNB1P62873 340 aa11.08□□□□□ -0.64
SLIRP-207ENST00000556831 SNX29P2Q8IUI4 249 aa11.08□□□□□ -0.64
SLIRP-207ENST00000556831 TCTEX1D1Q8N7M0 179 aa11.08□□□□□ -0.64
SLIRP-207ENST00000556831 C15orf40Q8WUR7 153 aa11.08□□□□□ -0.64
SLIRP-207ENST00000556831 TCTEX1D2Q8WW35 142 aa11.08□□□□□ -0.64
SLIRP-207ENST00000556831 HSD17B10Q99714 261 aaKnown RBP11.08□□□□□ -0.64
SLIRP-207ENST00000556831 NEURL2Q9BR09 285 aa11.08□□□□□ -0.64
SLIRP-207ENST00000556831 RBMX2Q9Y388 322 aaKnown RBP11.08□□□□□ -0.64
SLIRP-207ENST00000556831 WSB1Q9Y6I7 421 aa11.08□□□□□ -0.64
SLIRP-207ENST00000556831 PROP1O75360 226 aa11.07□□□□□ -0.64
SLIRP-207ENST00000556831 PPYP01298 95 aa11.07□□□□□ -0.64
SLIRP-207ENST00000556831 IGHG4P01861 327 aa11.07□□□□□ -0.64
SLIRP-207ENST00000556831 ELK1P19419 428 aa11.07□□□□□ -0.64
SLIRP-207ENST00000556831 AADACP22760 399 aa11.07□□□□□ -0.64
SLIRP-207ENST00000556831 LINC00205P59089 165 aa11.07□□□□□ -0.64
SLIRP-207ENST00000556831 AKAP14Q86UN6 197 aa11.07□□□□□ -0.64
SLIRP-207ENST00000556831 TMEM17Q86X19 198 aa11.07□□□□□ -0.64
SLIRP-207ENST00000556831 ZNF695Q8IW36 515 aa11.07□□□□□ -0.64
SLIRP-207ENST00000556831 GDPD1Q8N9F7 314 aa11.07□□□□□ -0.64
SLIRP-207ENST00000556831 OR4S2Q8NH73 311 aa11.07□□□□□ -0.64
SLIRP-207ENST00000556831 OSR1Q8TAX0 266 aaPredicted RBP11.07□□□□□ -0.64
SLIRP-207ENST00000556831 ARPC1AQ92747 370 aa11.07□□□□□ -0.64
SLIRP-207ENST00000556831 SCPEP1Q9HB40 452 aa11.07□□□□□ -0.64
SLIRP-207ENST00000556831 A0A1W2PN81 502 aa11.06□□□□□ -0.64
SLIRP-207ENST00000556831 FCGR3BO75015 233 aa11.06□□□□□ -0.64
SLIRP-207ENST00000556831 ACTL6BO94805 426 aa11.06□□□□□ -0.64
SLIRP-207ENST00000556831 RPLP1P05386 114 aaKnown RBP11.06□□□□□ -0.64
SLIRP-207ENST00000556831 TRAPPC2P0DI81 140 aa11.06□□□□□ -0.64
SLIRP-207ENST00000556831 TRAPPC2BP0DI82 140 aa11.06□□□□□ -0.64
SLIRP-207ENST00000556831 CHRNA7P36544 502 aa11.06□□□□□ -0.64
SLIRP-207ENST00000556831 KIR2DS2P43631 304 aa11.06□□□□□ -0.64
SLIRP-207ENST00000556831 EIF2B2P49770 351 aaKnown RBP11.06□□□□□ -0.64
SLIRP-207ENST00000556831 CX3CL1P78423 397 aa11.06□□□□□ -0.64
SLIRP-207ENST00000556831 CATR1Q13166 79 aa11.06□□□□□ -0.64
SLIRP-207ENST00000556831 TMEM177Q53S58 311 aa11.06□□□□□ -0.64
SLIRP-207ENST00000556831 OR2B11Q5JQS5 317 aa11.06□□□□□ -0.64
SLIRP-207ENST00000556831 PYHIN1Q6K0P9 492 aa11.06□□□□□ -0.64
SLIRP-207ENST00000556831 ZNF562Q6V9R5 426 aa11.06□□□□□ -0.64
SLIRP-207ENST00000556831 ZNF66Q6ZN08 573 aa11.06□□□□□ -0.64
SLIRP-207ENST00000556831 C8orf86Q6ZUL3 223 aa11.06□□□□□ -0.64
SLIRP-207ENST00000556831 PPP1R27Q86WC6 154 aa11.06□□□□□ -0.64
SLIRP-207ENST00000556831 ZBTB34Q8NCN2 500 aa11.06□□□□□ -0.64
SLIRP-207ENST00000556831 GRPEL2Q8TAA5 225 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms