RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 ATP6V1B2P21281 511 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 PRKACBP22694 351 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 CDK2P24941 298 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 FASP25445 335 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 ATP6V1E1P36543 226 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 PTGFRP43088 359 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 MAGEA2P43356 314 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 OR3A4PP47883 348 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 HCCSP53701 268 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 ATP1B3P54709 279 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 DLX6P56179 175 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 CXCR4P61073 352 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 RPL23AP62750 156 aaKnown RBP3.65□□□□□ -1.83
HIF1A-209ENST00000556827 SPIN3Q5JUX0 258 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 TMEM42Q69YG0 159 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 ZNF322Q6U7Q0 402 aaPredicted RBP3.65□□□□□ -1.83
HIF1A-209ENST00000556827 HEPN1Q6WQI6 88 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 SLC25A26Q70HW3 274 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 SLC35E3Q7Z769 313 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 ZNF695Q8IW36 515 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 ELMOD2Q8IZ81 293 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 FAM58AQ8N1B3 248 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 BATF2Q8N1L9 274 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 YIPF7Q8N8F6 280 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 ZNF565Q8N9K5 539 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 CHST4Q8NCG5 386 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 OR8U1Q8NH10 309 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 DNAJC9Q8WXX5 260 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 PP6455Q8WZ26 134 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 NIPSNAP1Q9BPW8 284 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 FGF23Q9GZV9 251 aaPredicted RBP3.65□□□□□ -1.83
HIF1A-209ENST00000556827 CHST6Q9GZX3 395 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 HES4Q9HCC6 221 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 TAS2R3Q9NYW6 316 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 TAS2R1Q9NYW7 299 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 OR52A1Q9UKL2 312 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 R4GMQ9 66 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 HSPE1-MOB4S4R3N1 261 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 NOTCH1P46531 2555 aa3.65□□□□□ -1.83
HIF1A-209ENST00000556827 TRBV2A0A0J9YWF9 115 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 A0A0U1RRA0 63 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 A6NIN4 97 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 BUB1B-PAK6H3BSN5 160 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 SIRPB1O00241 398 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 EI24O14681 340 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 RPP14O95059 124 aaKnown RBP3.64□□□□□ -1.83
HIF1A-209ENST00000556827 TTRP02766 147 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 ZNF44P15621 663 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 PRKACAP17612 351 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 NFYBP25208 207 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 ERP29P30040 261 aaKnown RBP3.64□□□□□ -1.83
HIF1A-209ENST00000556827 POU3F4P49335 361 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 RBP2P50120 134 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 CDK5Q00535 292 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 ZNF85Q03923 595 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 CBX3Q13185 183 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 MADCAM1Q13477 382 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 TPTE2P1Q5T6R2 138 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 FAM27D1Q5T7N8 215 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 PRAMEF5Q5TYX0 476 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 LIPKQ5VXJ0 399 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 OR2W3Q7Z3T1 314 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 FAM220AQ7Z4H9 259 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 TPRX1Q8N7U7 411 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 BBS1Q8NFJ9 593 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 OR4P4Q8NGL7 312 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 MUC7Q8TAX7 377 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 HAVCR2Q8TDQ0 301 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 TMEM37Q8WXS4 190 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 C10orf35Q96D05 121 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 CPNE2Q96FN4 548 aaPredicted RBP3.64□□□□□ -1.83
HIF1A-209ENST00000556827 APOL4Q9BPW4 351 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 RHOFQ9HBH0 211 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 EXOSC4Q9NPD3 245 aaKnown RBP3.64□□□□□ -1.83
HIF1A-209ENST00000556827 MED4Q9NPJ6 270 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 TVP23BQ9NYZ1 205 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 MTCH1Q9NZJ7 389 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 GSTK1Q9Y2Q3 226 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 V9GYS6 101 aa3.64□□□□□ -1.83
HIF1A-209ENST00000556827 ODAMA1E959 279 aa3.63□□□□□ -1.83
HIF1A-209ENST00000556827 METTL15A6NJ78 407 aa3.63□□□□□ -1.83
HIF1A-209ENST00000556827 ZNF729A6NN14 1252 aaPredicted RBP3.63□□□□□ -1.83
HIF1A-209ENST00000556827 NCBP2LA6PVI3 153 aaKnown RBP3.63□□□□□ -1.83
HIF1A-209ENST00000556827 SEC14L6B5MCN3 397 aa3.63□□□□□ -1.83
HIF1A-209ENST00000556827 H0YHG0 523 aa3.63□□□□□ -1.83
HIF1A-209ENST00000556827 DEGS1O15121 323 aa3.63□□□□□ -1.83
HIF1A-209ENST00000556827 FGF16O43320 207 aa3.63□□□□□ -1.83
HIF1A-209ENST00000556827 MPZL2O60487 215 aa3.63□□□□□ -1.83
HIF1A-209ENST00000556827 OR2H2O95918 312 aa3.63□□□□□ -1.83
HIF1A-209ENST00000556827 IGLV3-1P01715 115 aa3.63□□□□□ -1.83
HIF1A-209ENST00000556827 GAPDHP04406 335 aaKnown RBP3.63□□□□□ -1.83
HIF1A-209ENST00000556827 RPSAP08865 295 aaKnown RBP3.63□□□□□ -1.83
HIF1A-209ENST00000556827 VDAC1P21796 283 aa3.63□□□□□ -1.83
HIF1A-209ENST00000556827 IL3RAP26951 378 aa3.63□□□□□ -1.83
HIF1A-209ENST00000556827 RAB7AP51149 207 aa3.63□□□□□ -1.83
HIF1A-209ENST00000556827 INSL3P51460 131 aa3.63□□□□□ -1.83
HIF1A-209ENST00000556827 CRISP1P54107 249 aa3.63□□□□□ -1.83
HIF1A-209ENST00000556827 CXCL6P80162 114 aa3.63□□□□□ -1.83
HIF1A-209ENST00000556827 NDPQ00604 133 aa3.63□□□□□ -1.83
HIF1A-209ENST00000556827 UBE2V2Q15819 145 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms