RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 GABRG3Q99928 467 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 CHST5Q9GZS9 411 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 ARV1Q9H2C2 271 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 C1orf198Q9H425 327 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 SMDT1Q9H4I9 107 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 ASF1BQ9NVP2 202 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 ABRACLQ9P1F3 81 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 SLC35A3Q9Y2D2 325 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 DNAJC15Q9Y5T4 150 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 WIF1Q9Y5W5 379 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 ANKRD36CQ5JPF3 1778 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 KIDINS220Q9ULH0 1771 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 UBR1Q8IWV7 1749 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-210ENST00000556718 ADAMTSL3P82987 1691 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 PLCH1Q4KWH8 1693 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 CICQ96RK0 1608 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-210ENST00000556718 PIKFYVEQ9Y2I7 2098 aa2.78□□□□□ -1.96
PRPF39-210ENST00000556718 LAMB4A4D0S4 1761 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 RGPD8O14715 1765 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-210ENST00000556718 RGPD5Q99666 1765 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 DLEC1Q9Y238 1755 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 COL1A2P08123 1366 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 PEAK1Q9H792 1746 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 RIMS1Q86UR5 1692 aaKnown RBP2.77□□□□□ -1.97
PRPF39-210ENST00000556718 A0A1B0GW15 77 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 MGAT4DA6NG13 374 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 TVP23AA6NH52 213 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 OR5H1A6NKK0 313 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 RNASEK-C17orf49H0YIS7 233 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 M0R036 132 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 MFNGO00587 321 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 TP53I11O14683 189 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 PSPHP1O15172 72 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 MAGEB4O15481 346 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-210ENST00000556718 FOXH1O75593 365 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 GCM2O75603 506 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-210ENST00000556718 MT-ND4P03905 459 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 RPN2P04844 631 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 CST2P09228 141 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 OR5AC1P0C628 307 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 SLC25A4P12235 298 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 KDELR2P33947 212 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 IFNGR2P38484 337 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 PSMB2P49721 201 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 KLF3P57682 345 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-210ENST00000556718 MLF1P58340 268 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 RPS20P60866 119 aaKnown RBP2.77□□□□□ -1.97
PRPF39-210ENST00000556718 LOXL1Q08397 574 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-210ENST00000556718 SYCNQ0VAF6 134 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 SSX1Q16384 188 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 MAPK14Q16539 360 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 PSG3Q16557 428 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 DEFB115Q30KQ5 88 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 MESTQ5EB52 335 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 KHDRBS2Q5VWX1 349 aaKnown RBP2.77□□□□□ -1.97
PRPF39-210ENST00000556718 GLT8D1Q68CQ7 371 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 CLEC6AQ6EIG7 209 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 DRAM2Q6UX65 266 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 CYHR1Q6ZMK1 362 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 CALHM3Q86XJ0 350 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 SAXO1Q8IYX7 474 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 HS3ST5Q8IZT8 346 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 TMEM256Q8N2U0 113 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 OR10G2Q8NGC3 310 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 OR4K5Q8NGD3 323 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 OR52P1PQ8NH57 321 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 PIGXQ8TBF5 258 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 TNFAIP8L1Q8WVP5 186 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 TMEM239Q8WW34 195 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 HIST1H2BAQ96A08 127 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 TBL1YQ9BQ87 522 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 VPS25Q9BRG1 176 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 TMEM208Q9BTX3 173 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 DOHHQ9BU89 302 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 ZNF426Q9BUY5 554 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 DDA1Q9BW61 102 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 ZNF471Q9BX82 626 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-210ENST00000556718 C1QTNF6Q9BXI9 259 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 TLNRD1Q9H1K6 362 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 ATG5Q9H1Y0 275 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 ZNF442Q9H7R0 627 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 NMNAT1Q9HAN9 279 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-210ENST00000556718 UBQLN4Q9NRR5 601 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 CISHQ9NSE2 258 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 ZNF355PQ9NSJ1 428 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 LYRM2Q9NU23 88 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-210ENST00000556718 DKKL1Q9UK85 242 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 SLC7A11Q9UPY5 501 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 PSG11Q9UQ72 335 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 ARHGAP21Q5T5U3 1957 aa2.77□□□□□ -1.97
PRPF39-210ENST00000556718 AFDNP55196 1824 aaKnown RBP2.77□□□□□ -1.97
PRPF39-210ENST00000556718 FER1L6Q2WGJ9 1857 aa2.76□□□□□ -1.97
PRPF39-210ENST00000556718 A0A087WUJ7 227 aa2.76□□□□□ -1.97
PRPF39-210ENST00000556718 FAM240AA0A1B0GVK7 77 aa2.76□□□□□ -1.97
PRPF39-210ENST00000556718 TMEM269A0A1B0GVZ9 245 aa2.76□□□□□ -1.97
PRPF39-210ENST00000556718 C7orf77A4D0Y5 90 aa2.76□□□□□ -1.97
PRPF39-210ENST00000556718 PPP5D1E7EU14 171 aa2.76□□□□□ -1.97
PRPF39-210ENST00000556718 GABARAPH6UMI1 98 aa2.76□□□□□ -1.97
PRPF39-210ENST00000556718 K7EP13 123 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms