RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 ACOT6Q3I5F7 207 aaPredicted RBP5.13□□□□□ -1.59
CPSF2-205ENST00000556622 LBHQ53QV2 105 aaPredicted RBP5.13□□□□□ -1.59
CPSF2-205ENST00000556622 ZNF324BQ6AW86 544 aaPredicted RBP5.13□□□□□ -1.59
CPSF2-205ENST00000556622 HEPN1Q6WQI6 88 aa5.13□□□□□ -1.59
CPSF2-205ENST00000556622 ZNF497Q6ZNH5 498 aa5.13□□□□□ -1.59
CPSF2-205ENST00000556622 TGIF2LYQ8IUE0 185 aa5.13□□□□□ -1.59
CPSF2-205ENST00000556622 PRR18Q8N4B5 295 aa5.13□□□□□ -1.59
CPSF2-205ENST00000556622 FAM24BQ8N5W8 94 aa5.13□□□□□ -1.59
CPSF2-205ENST00000556622 CLDND2Q8NHS1 167 aa5.13□□□□□ -1.59
CPSF2-205ENST00000556622 MRPL30Q8TCC3 161 aaKnown RBP5.13□□□□□ -1.59
CPSF2-205ENST00000556622 SIGLEC12Q96PQ1 595 aa5.13□□□□□ -1.59
CPSF2-205ENST00000556622 IMMP2LQ96T52 175 aa5.13□□□□□ -1.59
CPSF2-205ENST00000556622 PFDN5Q99471 154 aa5.13□□□□□ -1.59
CPSF2-205ENST00000556622 CXXC4Q9H2H0 198 aa5.13□□□□□ -1.59
CPSF2-205ENST00000556622 NCOR1P1Q9H4R4 102 aa5.13□□□□□ -1.59
CPSF2-205ENST00000556622 C11orf1Q9H5F2 150 aa5.13□□□□□ -1.59
CPSF2-205ENST00000556622 CCL28Q9NRJ3 127 aa5.13□□□□□ -1.59
CPSF2-205ENST00000556622 GAR1Q9NY12 217 aaKnown RBP5.13□□□□□ -1.59
CPSF2-205ENST00000556622 OR14J1Q9UGF5 321 aa5.13□□□□□ -1.59
CPSF2-205ENST00000556622 NAT8Q9UHE5 227 aa5.13□□□□□ -1.59
CPSF2-205ENST00000556622 RNF115Q9Y4L5 304 aa5.13□□□□□ -1.59
CPSF2-205ENST00000556622 PCNX3Q9H6A9 2034 aa5.13□□□□□ -1.59
CPSF2-205ENST00000556622 MYO7BQ6PIF6 2116 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 SHANK1Q9Y566 2161 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 TRBV24-1A0A075B6N3 115 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 CTXND1A0A1B0GTU2 59 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 LOC102723971A0A1B0GUV8 181 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 IGSF23A1L1A6 192 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 IQCF6A8MYZ5 107 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 HS3ST1O14792 307 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 RAB29O14966 203 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 CST7O76096 145 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 AGFG2O95081 481 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 CLDN14O95500 239 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 ELANEP08246 267 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 RFPL3SP0C7P2 107 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 PGA5P0DJD9 388 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 CBR1P16152 277 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 CEACAM6P40199 344 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 UQCRFS1P47985 274 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 RAB7AP51149 207 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 SELENOVP59797 346 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 ERVK-16P61578 105 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 PPP1CBP62140 327 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 DLK1P80370 383 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 HTD2P86397 168 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 HABP2Q14520 560 aaPredicted RBP5.12□□□□□ -1.59
CPSF2-205ENST00000556622 RTL8BQ17RB0 113 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 TMEM241Q24JQ0 296 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 ZNF674Q2M3X9 581 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 SMIM21Q3B7S5 101 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 ZNF718Q3SXZ3 478 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 CXorf66Q5JRM2 361 aaPredicted RBP5.12□□□□□ -1.59
CPSF2-205ENST00000556622 GFRALQ6UXV0 394 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 H2BFWTQ7Z2G1 175 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 RNF144BQ7Z419 303 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 LURAP1LQ8IV03 231 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 TMEM251Q8N6I4 163 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 TMEM217Q8N7C4 229 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 ST6GALNAC3Q8NDV1 305 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 MDS2Q8NDY4 140 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 OR11L1Q8NGX0 322 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 HPSE2Q8WWQ2 592 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 IL1F10Q8WWZ1 152 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 BCL2L2Q92843 193 aaPredicted RBP5.12□□□□□ -1.59
CPSF2-205ENST00000556622 SARAFQ96BY9 339 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 ACY3Q96HD9 319 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 MLST8Q9BVC4 326 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 TMEM147Q9BVK8 224 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 HES7Q9BYE0 225 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 MRPL37Q9BZE1 423 aaKnown RBP5.12□□□□□ -1.59
CPSF2-205ENST00000556622 WDR61Q9GZS3 305 aaKnown RBP5.12□□□□□ -1.59
CPSF2-205ENST00000556622 LIME1Q9H400 295 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 WFDC1Q9HC57 220 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 PITPNC1Q9UKF7 332 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 KCNS2Q9ULS6 477 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 DMRT1Q9Y5R6 373 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 MYO18BQ8IUG5 2567 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 GCN1Q92616 2671 aaKnown RBP5.12□□□□□ -1.59
CPSF2-205ENST00000556622 GTF3C1Q12789 2109 aa5.12□□□□□ -1.59
CPSF2-205ENST00000556622 PRRC2CQ9Y520 2896 aaKnown RBP5.12□□□□□ -1.59
CPSF2-205ENST00000556622 EML6Q6ZMW3 1958 aa5.11□□□□□ -1.59
CPSF2-205ENST00000556622 A0A1W2PPV4 95 aa5.11□□□□□ -1.59
CPSF2-205ENST00000556622 C5orf63A6NC05 138 aa5.11□□□□□ -1.59
CPSF2-205ENST00000556622 ZNF727A8MUV8 499 aa5.11□□□□□ -1.59
CPSF2-205ENST00000556622 VSTM5A8MXK1 200 aa5.11□□□□□ -1.59
CPSF2-205ENST00000556622 PPP5D1E7EU14 171 aa5.11□□□□□ -1.59
CPSF2-205ENST00000556622 F6UZH7 168 aa5.11□□□□□ -1.59
CPSF2-205ENST00000556622 TSTD3H0UI37 97 aa5.11□□□□□ -1.59
CPSF2-205ENST00000556622 ITGB1BP1O14713 200 aa5.11□□□□□ -1.59
CPSF2-205ENST00000556622 RBFOX2O43251 390 aaKnown RBP eCLIP5.11□□□□□ -1.59
CPSF2-205ENST00000556622 ZNF737O75373 536 aa5.11□□□□□ -1.59
CPSF2-205ENST00000556622 EIF3GO75821 320 aaKnown RBP eCLIP5.11□□□□□ -1.59
CPSF2-205ENST00000556622 PTBP3O95758 552 aaKnown RBP5.11□□□□□ -1.59
CPSF2-205ENST00000556622 NGFP01138 241 aa5.11□□□□□ -1.59
CPSF2-205ENST00000556622 IFNA10P01566 189 aa5.11□□□□□ -1.59
CPSF2-205ENST00000556622 IGHV2-5P01817 119 aa5.11□□□□□ -1.59
CPSF2-205ENST00000556622 FABP1P07148 127 aa5.11□□□□□ -1.59
CPSF2-205ENST00000556622 PATE4P0C8F1 98 aa5.11□□□□□ -1.59
CPSF2-205ENST00000556622 KLK2P20151 261 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms