RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 VPREB3Q9UKI3 123 aa13.92□□□□□ -0.18
TUBB3-211ENST00000556536 PRELID3BQ9Y3B1 194 aa13.92□□□□□ -0.18
TUBB3-211ENST00000556536 POMT1Q9Y6A1 747 aa13.92□□□□□ -0.18
TUBB3-211ENST00000556536 BTBD17A6NE02 478 aa13.91□□□□□ -0.18
TUBB3-211ENST00000556536 RAMP3O60896 148 aa13.91□□□□□ -0.18
TUBB3-211ENST00000556536 MOSP00540 346 aa13.91□□□□□ -0.18
TUBB3-211ENST00000556536 TCRBP04435 133 aa13.91□□□□□ -0.18
TUBB3-211ENST00000556536 TMEM11P17152 192 aa13.91□□□□□ -0.18
TUBB3-211ENST00000556536 F2RP25116 425 aa13.91□□□□□ -0.18
TUBB3-211ENST00000556536 S100GP29377 79 aa13.91□□□□□ -0.18
TUBB3-211ENST00000556536 SRSF2Q01130 221 aaKnown RBP13.91□□□□□ -0.18
TUBB3-211ENST00000556536 CATR1Q13166 79 aa13.91□□□□□ -0.18
TUBB3-211ENST00000556536 NRARPQ7Z6K4 114 aa13.91□□□□□ -0.18
TUBB3-211ENST00000556536 PDPNQ86YL7 162 aa13.91□□□□□ -0.18
TUBB3-211ENST00000556536 SPAG16Q8N0X2 631 aa13.91□□□□□ -0.18
TUBB3-211ENST00000556536 CCDC71LQ8N9Z2 235 aa13.91□□□□□ -0.18
TUBB3-211ENST00000556536 CRYM-AS1A6NIL9 109 aa13.9□□□□□ -0.18
TUBB3-211ENST00000556536 ARPC1BO15143 372 aaKnown RBP13.9□□□□□ -0.18
TUBB3-211ENST00000556536 TCF21O43680 179 aa13.9□□□□□ -0.18
TUBB3-211ENST00000556536 CHST1O43916 411 aa13.9□□□□□ -0.18
TUBB3-211ENST00000556536 PEX14O75381 377 aa13.9□□□□□ -0.18
TUBB3-211ENST00000556536 CRYZL1O95825 349 aa13.9□□□□□ -0.18
TUBB3-211ENST00000556536 VSIG10L2P0DP72 767 aa13.9□□□□□ -0.18
TUBB3-211ENST00000556536 RRASP10301 218 aa13.9□□□□□ -0.18
TUBB3-211ENST00000556536 AKR1C4P17516 323 aa13.9□□□□□ -0.18
TUBB3-211ENST00000556536 CNTFRP26992 372 aa13.9□□□□□ -0.18
TUBB3-211ENST00000556536 TAGLNQ01995 201 aaKnown RBP13.9□□□□□ -0.18
TUBB3-211ENST00000556536 RTL8BQ17RB0 113 aa13.9□□□□□ -0.18
TUBB3-211ENST00000556536 ENKURQ8TC29 256 aa13.9□□□□□ -0.18
TUBB3-211ENST00000556536 TP53RKQ96S44 253 aa13.9□□□□□ -0.18
TUBB3-211ENST00000556536 C20orf85Q9H1P6 137 aa13.9□□□□□ -0.18
TUBB3-211ENST00000556536 NAA60Q9H7X0 242 aa13.9□□□□□ -0.18
TUBB3-211ENST00000556536 PLSCR3Q9NRY6 295 aa13.9□□□□□ -0.18
TUBB3-211ENST00000556536 ANK2Q01484 3957 aa13.9□□□□□ -0.18
TUBB3-211ENST00000556536 TEX13DA0A0J9YY54 714 aaPredicted RBP13.89□□□□□ -0.19
TUBB3-211ENST00000556536 C3orf85A0A1B0GTC6 90 aa13.89□□□□□ -0.19
TUBB3-211ENST00000556536 CLDN34H7C241 214 aa13.89□□□□□ -0.19
TUBB3-211ENST00000556536 SPNP16150 400 aa13.89□□□□□ -0.19
TUBB3-211ENST00000556536 KIR2DS2P43631 304 aa13.89□□□□□ -0.19
TUBB3-211ENST00000556536 F2RL1P55085 397 aa13.89□□□□□ -0.19
TUBB3-211ENST00000556536 UBA52P62987 128 aaKnown RBP13.89□□□□□ -0.19
TUBB3-211ENST00000556536 SP6Q3SY56 376 aa13.89□□□□□ -0.19
TUBB3-211ENST00000556536 ZNF585BQ52M93 769 aa13.89□□□□□ -0.19
TUBB3-211ENST00000556536 TMEM177Q53S58 311 aa13.89□□□□□ -0.19
TUBB3-211ENST00000556536 SLC25A42Q86VD7 318 aa13.89□□□□□ -0.19
TUBB3-211ENST00000556536 CENPSQ8N2Z9 138 aa13.89□□□□□ -0.19
TUBB3-211ENST00000556536 OR4S2Q8NH73 311 aa13.89□□□□□ -0.19
TUBB3-211ENST00000556536 FLYWCH2Q96CP2 140 aaKnown RBP13.89□□□□□ -0.19
TUBB3-211ENST00000556536 RBM14Q96PK6 669 aaKnown RBP13.89□□□□□ -0.19
TUBB3-211ENST00000556536 SLC25A33Q9BSK2 321 aa13.89□□□□□ -0.19
TUBB3-211ENST00000556536 LIN7CQ9NUP9 197 aaKnown RBP13.89□□□□□ -0.19
TUBB3-211ENST00000556536 NUDT15Q9NV35 164 aa13.89□□□□□ -0.19
TUBB3-211ENST00000556536 PITPNC1Q9UKF7 332 aa13.89□□□□□ -0.19
TUBB3-211ENST00000556536 TRAV6A0A075B6T7 132 aa13.88□□□□□ -0.19
TUBB3-211ENST00000556536 A0A0A6YYJ9 748 aa13.88□□□□□ -0.19
TUBB3-211ENST00000556536 SRRM4A7MD48 611 aaKnown RBP13.88□□□□□ -0.19
TUBB3-211ENST00000556536 H0Y980 276 aa13.88□□□□□ -0.19
TUBB3-211ENST00000556536 GPR137BO60478 399 aa13.88□□□□□ -0.19
TUBB3-211ENST00000556536 OR2F2O95006 317 aa13.88□□□□□ -0.19
TUBB3-211ENST00000556536 ANXA7P20073 488 aaKnown RBP13.88□□□□□ -0.19
TUBB3-211ENST00000556536 LPAR6P43657 344 aa13.88□□□□□ -0.19
TUBB3-211ENST00000556536 RPS16P62249 146 aaKnown RBP13.88□□□□□ -0.19
TUBB3-211ENST00000556536 SUPT4H1P63272 117 aaKnown RBP13.88□□□□□ -0.19
TUBB3-211ENST00000556536 CBX3Q13185 183 aa13.88□□□□□ -0.19
TUBB3-211ENST00000556536 DUSP18Q8NEJ0 188 aa13.88□□□□□ -0.19
TUBB3-211ENST00000556536 OR4C13Q8NGP0 309 aa13.88□□□□□ -0.19
TUBB3-211ENST00000556536 JMJD8Q96S16 334 aa13.88□□□□□ -0.19
TUBB3-211ENST00000556536 BEX1Q9HBH7 125 aa13.88□□□□□ -0.19
TUBB3-211ENST00000556536 RBFOX2O43251 390 aaKnown RBP eCLIP13.87□□□□□ -0.19
TUBB3-211ENST00000556536 S1PR2O95136 353 aa13.87□□□□□ -0.19
TUBB3-211ENST00000556536 IGLV2-23P01705 113 aa13.87□□□□□ -0.19
TUBB3-211ENST00000556536 RNASE1P07998 156 aaKnown RBP13.87□□□□□ -0.19
TUBB3-211ENST00000556536 OR5AC1P0C628 307 aa13.87□□□□□ -0.19
TUBB3-211ENST00000556536 DHODHQ02127 395 aa13.87□□□□□ -0.19
TUBB3-211ENST00000556536 DHRS7BQ6IAN0 325 aaPredicted RBP13.87□□□□□ -0.19
TUBB3-211ENST00000556536 SGPP2Q8IWX5 399 aa13.87□□□□□ -0.19
TUBB3-211ENST00000556536 TCTEX1D1Q8N7M0 179 aa13.87□□□□□ -0.19
TUBB3-211ENST00000556536 HARBI1Q96MB7 349 aa13.87□□□□□ -0.19
TUBB3-211ENST00000556536 NUBP2Q9Y5Y2 271 aa13.87□□□□□ -0.19
TUBB3-211ENST00000556536 NCBP2LA6PVI3 153 aaKnown RBP13.86□□□□□ -0.19
TUBB3-211ENST00000556536 SHOXO15266 292 aa13.86□□□□□ -0.19
TUBB3-211ENST00000556536 IGKV1-39P01597 117 aa13.86□□□□□ -0.19
TUBB3-211ENST00000556536 IGKV1D-39P04432 117 aa13.86□□□□□ -0.19
TUBB3-211ENST00000556536 H2AFB2P0C5Z0 115 aa13.86□□□□□ -0.19
TUBB3-211ENST00000556536 RAB25P57735 213 aa13.86□□□□□ -0.19
TUBB3-211ENST00000556536 TAS2R31P59538 309 aa13.86□□□□□ -0.19
TUBB3-211ENST00000556536 PPP1R1AQ13522 171 aa13.86□□□□□ -0.19
TUBB3-211ENST00000556536 PSG5Q15238 335 aa13.86□□□□□ -0.19
TUBB3-211ENST00000556536 MMDQ15546 238 aa13.86□□□□□ -0.19
TUBB3-211ENST00000556536 TMEM128Q5BJH2 165 aa13.86□□□□□ -0.19
TUBB3-211ENST00000556536 LIAT1Q6ZQX7 453 aa13.86□□□□□ -0.19
TUBB3-211ENST00000556536 VKORC1L1Q8N0U8 176 aa13.86□□□□□ -0.19
TUBB3-211ENST00000556536 NPBQ8NG41 125 aa13.86□□□□□ -0.19
TUBB3-211ENST00000556536 CD300LFQ8TDQ1 290 aa13.86□□□□□ -0.19
TUBB3-211ENST00000556536 RNF5Q99942 180 aa13.86□□□□□ -0.19
TUBB3-211ENST00000556536 PRR13Q9NZ81 148 aa13.86□□□□□ -0.19
TUBB3-211ENST00000556536 MOB4Q9Y3A3 225 aa13.86□□□□□ -0.19
TUBB3-211ENST00000556536 FAM181BA6NEQ2 426 aa13.85□□□□□ -0.19
TUBB3-211ENST00000556536 SH2D7A6NKC9 451 aaPredicted RBP13.85□□□□□ -0.19
TUBB3-211ENST00000556536 NBR2O15453 112 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms