RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 LINC00299Q6ZSB3 139 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 Q6ZSV7 163 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 NR2C2APQ86WQ0 139 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 TGIF2LXQ8IUE1 241 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 CLVS1Q8IUQ0 354 aaPredicted RBP3.71□□□□□ -1.82
ATXN3-238ENST00000556288 FAM89BQ8N5H3 189 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 SAMD12Q8N8I0 201 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 OR2AK2Q8NG84 335 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 OR52M1Q8NGK5 317 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 OR4P4Q8NGL7 312 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 OR10J5Q8NHC4 309 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 CT45A3Q8NHU0 189 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 LGALS14Q8TCE9 139 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 ABHD14BQ96IU4 210 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 AKR1E2Q96JD6 320 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 S1PR3Q99500 378 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 RASL11BQ9BPW5 248 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 SLC25A33Q9BSK2 321 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 NAA50Q9GZZ1 169 aaKnown RBP3.71□□□□□ -1.82
ATXN3-238ENST00000556288 Q9N2K0 584 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 RCC2Q9P258 522 aaKnown RBP3.71□□□□□ -1.82
ATXN3-238ENST00000556288 ZNF221Q9UK13 617 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 ELF5Q9UKW6 265 aaPredicted RBP3.71□□□□□ -1.82
ATXN3-238ENST00000556288 HSF4Q9ULV5 492 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 CUBNO60494 3623 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 IGHV1-3A0A0C4DH29 117 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 A0A1B0GUS0 222 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 A6NDX4 124 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 TMEM235A6NFC5 223 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 ZNF736B4DX44 427 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-238ENST00000556288 LY6LH3BQJ8 138 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 RGS5O15539 181 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 CHST1O43916 411 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 YPEL1O60688 119 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 IGLV1-47P01700 117 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 OR8U9P0C7N5 309 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 SMIM18P0DKX4 95 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 CD37P11049 281 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 PTHLHP12272 177 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 HIST1H1DP16402 221 aaKnown RBP3.7□□□□□ -1.82
ATXN3-238ENST00000556288 CD34P28906 385 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 SOX6P35712 828 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 VDAC2P45880 294 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-238ENST00000556288 GPR12P47775 334 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 RORCP51449 518 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 ARPC4P59998 168 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 KRTAP10-11P60412 298 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 HLA-DRB3P79483 266 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 HTD2P86397 168 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 DCTN2Q13561 401 aaKnown RBP3.7□□□□□ -1.82
ATXN3-238ENST00000556288 PLGLAQ15195 96 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 AANATQ16613 207 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 NSUN5P1Q3KNT7 163 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 RPL39P5Q59GN2 51 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 IGSF11Q5DX21 431 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 GLDNQ6ZMI3 551 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-238ENST00000556288 OR2T10Q8NGZ9 312 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 OR8U1Q8NH10 309 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 LINC01006Q8NI28 216 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 PIFOQ8TCI5 191 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 NUDCD2Q8WVJ2 157 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 RBM14Q96PK6 669 aaKnown RBP3.7□□□□□ -1.82
ATXN3-238ENST00000556288 YPEL2Q96QA6 119 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 CLCC1Q96S66 551 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 ZNF251Q9BRH9 671 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 DCUN1D5Q9BTE7 237 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 DCSTAMPQ9H295 470 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 PALMDQ9NP74 551 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 C12orf4Q9NQ89 552 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 IFT46Q9NQC8 304 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 RHBDL2Q9NX52 303 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 OR1A1Q9P1Q5 309 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 RSL24D1Q9UHA3 163 aaKnown RBP3.7□□□□□ -1.82
ATXN3-238ENST00000556288 LINC00527Q9UJ94 153 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 MGAT4AQ9UM21 535 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 TCF19Q9Y242 345 aa3.7□□□□□ -1.82
ATXN3-238ENST00000556288 TNCP24821 2201 aa3.69□□□□□ -1.82
ATXN3-238ENST00000556288 A0A087X0M5 115 aa3.69□□□□□ -1.82
ATXN3-238ENST00000556288 A0A1B0GX30 115 aa3.69□□□□□ -1.82
ATXN3-238ENST00000556288 TCRBV4S1A1TA0A5B7 111 aa3.69□□□□□ -1.82
ATXN3-238ENST00000556288 SERPINE3A8MV23 424 aa3.69□□□□□ -1.82
ATXN3-238ENST00000556288 OOSP1A8MZH6 123 aa3.69□□□□□ -1.82
ATXN3-238ENST00000556288 M0R1X1 148 aa3.69□□□□□ -1.82
ATXN3-238ENST00000556288 RAB29O14966 203 aa3.69□□□□□ -1.82
ATXN3-238ENST00000556288 LDLRAD4O15165 306 aa3.69□□□□□ -1.82
ATXN3-238ENST00000556288 FABP7O15540 132 aa3.69□□□□□ -1.82
ATXN3-238ENST00000556288 HPGDSO60760 199 aa3.69□□□□□ -1.82
ATXN3-238ENST00000556288 SCGNO76038 276 aa3.69□□□□□ -1.82
ATXN3-238ENST00000556288 NDUFA7O95182 113 aa3.69□□□□□ -1.82
ATXN3-238ENST00000556288 NAPSAO96009 420 aa3.69□□□□□ -1.82
ATXN3-238ENST00000556288 MOSP00540 346 aa3.69□□□□□ -1.82
ATXN3-238ENST00000556288 PMP2P02689 132 aa3.69□□□□□ -1.82
ATXN3-238ENST00000556288 FCGR3AP08637 254 aa3.69□□□□□ -1.82
ATXN3-238ENST00000556288 NFYAP23511 347 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-238ENST00000556288 PRSS3P35030 304 aa3.69□□□□□ -1.82
ATXN3-238ENST00000556288 KIR2DS4P43632 304 aa3.69□□□□□ -1.82
ATXN3-238ENST00000556288 F2RL1P55085 397 aa3.69□□□□□ -1.82
ATXN3-238ENST00000556288 PITPNAQ00169 270 aa3.69□□□□□ -1.82
ATXN3-238ENST00000556288 KIR2DS1Q14954 304 aa3.69□□□□□ -1.82
ATXN3-238ENST00000556288 ARL6IP1Q15041 203 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms