RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 DUTP33316 252 aaKnown RBP6.4□□□□□ -1.38
LINC00641-202ENST00000555688 EWSR1Q01844 656 aaKnown RBP eCLIP6.4□□□□□ -1.38
LINC00641-202ENST00000555688 CT45A1Q5HYN5 189 aa6.4□□□□□ -1.38
LINC00641-202ENST00000555688 NCR3LG1Q68D85 454 aa6.4□□□□□ -1.38
LINC00641-202ENST00000555688 EIF4E3Q8N5X7 224 aaKnown RBP6.4□□□□□ -1.38
LINC00641-202ENST00000555688 TMEM252Q8N6L7 170 aa6.4□□□□□ -1.38
LINC00641-202ENST00000555688 TCTEX1D1Q8N7M0 179 aa6.4□□□□□ -1.38
LINC00641-202ENST00000555688 CT45A3Q8NHU0 189 aa6.4□□□□□ -1.38
LINC00641-202ENST00000555688 CA5BP1Q8WTZ4 195 aa6.4□□□□□ -1.38
LINC00641-202ENST00000555688 CCL17Q92583 94 aa6.4□□□□□ -1.38
LINC00641-202ENST00000555688 HSD17B10Q99714 261 aaKnown RBP6.4□□□□□ -1.38
LINC00641-202ENST00000555688 IFI27L2Q9H2X8 130 aa6.4□□□□□ -1.38
LINC00641-202ENST00000555688 KCNJ16Q9NPI9 418 aa6.4□□□□□ -1.38
LINC00641-202ENST00000555688 ZC4H2Q9NQZ6 224 aa6.4□□□□□ -1.38
LINC00641-202ENST00000555688 GNG12Q9UBI6 72 aa6.4□□□□□ -1.38
LINC00641-202ENST00000555688 CACNG5Q9UF02 275 aa6.4□□□□□ -1.38
LINC00641-202ENST00000555688 GAB2Q9UQC2 676 aa6.4□□□□□ -1.38
LINC00641-202ENST00000555688 PPIAL4AQ9Y536 164 aa6.4□□□□□ -1.38
LINC00641-202ENST00000555688 SPTBN1Q01082 2364 aaKnown RBP6.4□□□□□ -1.39
LINC00641-202ENST00000555688 YLPM1P49750 1951 aaKnown RBP6.39□□□□□ -1.39
LINC00641-202ENST00000555688 TRGV10A0A0A0MS01 117 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 S1PR2O95136 353 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 IGHV3-7P01780 117 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 AMY1AP04745 511 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 EIF5AP63241 154 aaKnown RBP6.39□□□□□ -1.39
LINC00641-202ENST00000555688 Q3ZCU0 254 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 ZNF672Q499Z4 452 aaPredicted RBP6.39□□□□□ -1.39
LINC00641-202ENST00000555688 MIDNQ504T8 468 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 OR2B11Q5JQS5 317 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 LYPD2Q6UXB3 125 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 HSD17B13Q7Z5P4 300 aaPredicted RBP6.39□□□□□ -1.39
LINC00641-202ENST00000555688 C1orf87Q8N0U7 546 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 SPAG16Q8N0X2 631 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 ZNF439Q8NDP4 499 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 LEAP2Q969E1 77 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 NEIL1Q96FI4 390 aaPredicted RBP6.39□□□□□ -1.39
LINC00641-202ENST00000555688 DYNLRB1Q9NP97 96 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 TMEM140Q9NV12 185 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 COA4Q9NYJ1 87 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 MMP24Q9Y5R2 645 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 ZNF729A6NN14 1252 aaPredicted RBP6.39□□□□□ -1.39
LINC00641-202ENST00000555688 B8ZZF3 427 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 I3L521 148 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 KRASP01116 189 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 PVALBP20472 110 aaPredicted RBP6.39□□□□□ -1.39
LINC00641-202ENST00000555688 G6PCP35575 357 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 GPR12P47775 334 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 AKR1C2P52895 323 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 ZNF816Q0VGE8 651 aaPredicted RBP6.39□□□□□ -1.39
LINC00641-202ENST00000555688 CATR1Q13166 79 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 RPL39P5Q59GN2 51 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 MUC15Q8N387 334 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 OR1S2Q8NGQ3 325 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 LRRC20Q8TCA0 184 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 TCTEX1D2Q8WW35 142 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 ZNF251Q9BRH9 671 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 GINS3Q9BRX5 216 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 C19orf12Q9NSK7 152 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 IDI2-AS1Q9NZ38 188 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 KAAG1Q9UBP8 84 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 CTSZQ9UBR2 303 aa6.39□□□□□ -1.39
LINC00641-202ENST00000555688 SLC25A10Q9UBX3 287 aaPredicted RBP6.39□□□□□ -1.39
LINC00641-202ENST00000555688 IGHV1-69-2A0A0G2JMI3 117 aa6.38□□□□□ -1.39
LINC00641-202ENST00000555688 TMEM8BA6NDV4 472 aa6.38□□□□□ -1.39
LINC00641-202ENST00000555688 TOR1AO14656 332 aa6.38□□□□□ -1.39
LINC00641-202ENST00000555688 TXNL1O43396 289 aa6.38□□□□□ -1.39
LINC00641-202ENST00000555688 SYNGR2O43760 224 aa6.38□□□□□ -1.39
LINC00641-202ENST00000555688 SPP1P10451 314 aa6.38□□□□□ -1.39
LINC00641-202ENST00000555688 NDUFB7P17568 137 aa6.38□□□□□ -1.39
LINC00641-202ENST00000555688 COL8A2P25067 703 aa6.38□□□□□ -1.39
LINC00641-202ENST00000555688 SULT1A2P50226 295 aa6.38□□□□□ -1.39
LINC00641-202ENST00000555688 CAV2P51636 162 aa6.38□□□□□ -1.39
LINC00641-202ENST00000555688 VAMP2P63027 116 aa6.38□□□□□ -1.39
LINC00641-202ENST00000555688 MEF2CQ06413 473 aaPredicted RBP6.38□□□□□ -1.39
LINC00641-202ENST00000555688 ZNF273Q14593 569 aa6.38□□□□□ -1.39
LINC00641-202ENST00000555688 RNASE11Q8TAA1 199 aaKnown RBP6.38□□□□□ -1.39
LINC00641-202ENST00000555688 DDB2Q92466 427 aa6.38□□□□□ -1.39
LINC00641-202ENST00000555688 LRRC46Q96FV0 321 aa6.38□□□□□ -1.39
LINC00641-202ENST00000555688 SMIM8Q96KF7 97 aa6.38□□□□□ -1.39
LINC00641-202ENST00000555688 RAB40CQ96S21 281 aa6.38□□□□□ -1.39
LINC00641-202ENST00000555688 ABHD14AQ9BUJ0 271 aa6.38□□□□□ -1.39
LINC00641-202ENST00000555688 SLC25A31Q9H0C2 315 aa6.38□□□□□ -1.39
LINC00641-202ENST00000555688 TAS2R3Q9NYW6 316 aa6.38□□□□□ -1.39
LINC00641-202ENST00000555688 LPAR3Q9UBY5 353 aa6.38□□□□□ -1.39
LINC00641-202ENST00000555688 RPUSD1Q9UJJ7 312 aaKnown RBP6.38□□□□□ -1.39
LINC00641-202ENST00000555688 LINC00312Q9Y6C7 94 aa6.38□□□□□ -1.39
LINC00641-202ENST00000555688 WSB1Q9Y6I7 421 aa6.38□□□□□ -1.39
LINC00641-202ENST00000555688 DOCK11Q5JSL3 2073 aa6.38□□□□□ -1.39
LINC00641-202ENST00000555688 LRBAP50851 2863 aa6.37□□□□□ -1.39
LINC00641-202ENST00000555688 HRNRQ86YZ3 2850 aaPredicted RBP6.37□□□□□ -1.39
LINC00641-202ENST00000555688 A0A1W2PPE3 182 aa6.37□□□□□ -1.39
LINC00641-202ENST00000555688 hADV38S2A0JD32 116 aa6.37□□□□□ -1.39
LINC00641-202ENST00000555688 NKX6-3A6NJ46 265 aa6.37□□□□□ -1.39
LINC00641-202ENST00000555688 FAM90A26D6RGX4 464 aa6.37□□□□□ -1.39
LINC00641-202ENST00000555688 M0R1X1 148 aa6.37□□□□□ -1.39
LINC00641-202ENST00000555688 WRBO00258 174 aa6.37□□□□□ -1.39
LINC00641-202ENST00000555688 RAB29O14966 203 aa6.37□□□□□ -1.39
LINC00641-202ENST00000555688 CST7O76096 145 aa6.37□□□□□ -1.39
LINC00641-202ENST00000555688 SEC11BP0C7V7 166 aa6.37□□□□□ -1.39
LINC00641-202ENST00000555688 RAB7AP51149 207 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms