RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 PTX4Q96A99 478 aa7.08□□□□□ -1.28
SCFD1-215ENST00000555259 FAAP24Q9BTP7 215 aa7.08□□□□□ -1.28
SCFD1-215ENST00000555259 ZNF446Q9NWS9 450 aa7.08□□□□□ -1.28
SCFD1-215ENST00000555259 ZNF221Q9UK13 617 aa7.08□□□□□ -1.28
SCFD1-215ENST00000555259 APOBP04114 4563 aaKnown RBP7.07□□□□□ -1.28
SCFD1-215ENST00000555259 SNTNA6NMZ2 147 aa7.07□□□□□ -1.28
SCFD1-215ENST00000555259 C11orf94C9JXX5 98 aa7.07□□□□□ -1.28
SCFD1-215ENST00000555259 SHOXO15266 292 aa7.07□□□□□ -1.28
SCFD1-215ENST00000555259 S1PR2O95136 353 aa7.07□□□□□ -1.28
SCFD1-215ENST00000555259 NAPSAO96009 420 aa7.07□□□□□ -1.28
SCFD1-215ENST00000555259 IGHV3-23P01764 117 aa7.07□□□□□ -1.28
SCFD1-215ENST00000555259 C8orf88P0DMB2 117 aa7.07□□□□□ -1.28
SCFD1-215ENST00000555259 ARL3P36405 182 aa7.07□□□□□ -1.28
SCFD1-215ENST00000555259 SNRPGP62308 76 aaKnown RBP7.07□□□□□ -1.28
SCFD1-215ENST00000555259 MED22Q15528 200 aa7.07□□□□□ -1.28
SCFD1-215ENST00000555259 RPL22L1Q6P5R6 122 aaKnown RBP7.07□□□□□ -1.28
SCFD1-215ENST00000555259 CLEC19AQ6UXS0 136 aa7.07□□□□□ -1.28
SCFD1-215ENST00000555259 IDO2Q6ZQW0 420 aa7.07□□□□□ -1.28
SCFD1-215ENST00000555259 TTC9CQ8N5M4 171 aa7.07□□□□□ -1.28
SCFD1-215ENST00000555259 MAPKAPK5-AS1Q8N8E1 139 aa7.07□□□□□ -1.28
SCFD1-215ENST00000555259 OR13C5Q8NGS8 318 aa7.07□□□□□ -1.28
SCFD1-215ENST00000555259 OR11H2Q8NH07 326 aa7.07□□□□□ -1.28
SCFD1-215ENST00000555259 SETD6Q8TBK2 473 aa7.07□□□□□ -1.28
SCFD1-215ENST00000555259 MARC2Q969Z3 335 aa7.07□□□□□ -1.28
SCFD1-215ENST00000555259 GALNT14Q96FL9 552 aa7.07□□□□□ -1.28
SCFD1-215ENST00000555259 CCDC140Q96MF4 163 aa7.07□□□□□ -1.28
SCFD1-215ENST00000555259 CKLFQ9UBR5 152 aa7.07□□□□□ -1.28
SCFD1-215ENST00000555259 AASSQ9UDR5 926 aa7.07□□□□□ -1.28
SCFD1-215ENST00000555259 M0R2N4 97 aa7.06□□□□□ -1.28
SCFD1-215ENST00000555259 DEFB4AO15263 64 aa7.06□□□□□ -1.28
SCFD1-215ENST00000555259 CCDC58Q4VC31 144 aa7.06□□□□□ -1.28
SCFD1-215ENST00000555259 ZNF585BQ52M93 769 aa7.06□□□□□ -1.28
SCFD1-215ENST00000555259 GLT8D1Q68CQ7 371 aa7.06□□□□□ -1.28
SCFD1-215ENST00000555259 UNQ9165/PRO28630Q6UXU0 137 aa7.06□□□□□ -1.28
SCFD1-215ENST00000555259 MOB1BQ7L9L4 216 aa7.06□□□□□ -1.28
SCFD1-215ENST00000555259 C6orf201Q7Z4U5 140 aa7.06□□□□□ -1.28
SCFD1-215ENST00000555259 ZNF645Q8N7E2 425 aa7.06□□□□□ -1.28
SCFD1-215ENST00000555259 TEX45Q8NA69 505 aa7.06□□□□□ -1.28
SCFD1-215ENST00000555259 ACOT12Q8WYK0 555 aa7.06□□□□□ -1.28
SCFD1-215ENST00000555259 NEDD4LQ96PU5 975 aa7.06□□□□□ -1.28
SCFD1-215ENST00000555259 SPIN2AQ99865 258 aa7.06□□□□□ -1.28
SCFD1-215ENST00000555259 SPIN2BQ9BPZ2 258 aa7.06□□□□□ -1.28
SCFD1-215ENST00000555259 C5orf66Q9H5L9 145 aa7.06□□□□□ -1.28
SCFD1-215ENST00000555259 CHMP1AQ9HD42 196 aaPredicted RBP7.06□□□□□ -1.28
SCFD1-215ENST00000555259 POMPQ9Y244 141 aa7.06□□□□□ -1.28
SCFD1-215ENST00000555259 TRBV5-5A0A0J9YX44 114 aa7.05□□□□□ -1.28
SCFD1-215ENST00000555259 TSPAN4O14817 238 aa7.05□□□□□ -1.28
SCFD1-215ENST00000555259 CDK2AP2O75956 126 aa7.05□□□□□ -1.28
SCFD1-215ENST00000555259 SCTP09683 121 aa7.05□□□□□ -1.28
SCFD1-215ENST00000555259 UBE2KP61086 200 aa7.05□□□□□ -1.28
SCFD1-215ENST00000555259 VMA21Q3ZAQ7 101 aa7.05□□□□□ -1.28
SCFD1-215ENST00000555259 C19orf35Q6ZS72 473 aa7.05□□□□□ -1.28
SCFD1-215ENST00000555259 AMIGO2Q86SJ2 522 aa7.05□□□□□ -1.28
SCFD1-215ENST00000555259 CDH26Q8IXH8 852 aa7.05□□□□□ -1.28
SCFD1-215ENST00000555259 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.05□□□□□ -1.28
SCFD1-215ENST00000555259 OR5B3Q8NH48 314 aa7.05□□□□□ -1.28
SCFD1-215ENST00000555259 CSTL1Q9H114 145 aa7.05□□□□□ -1.28
SCFD1-215ENST00000555259 MRPL27Q9P0M9 148 aaKnown RBP7.05□□□□□ -1.28
SCFD1-215ENST00000555259 S4R3C0 116 aa7.05□□□□□ -1.28
SCFD1-215ENST00000555259 IGHV4-4A0A075B6R2 117 aa7.04□□□□□ -1.28
SCFD1-215ENST00000555259 MPTX1A8MV57 137 aa7.04□□□□□ -1.28
SCFD1-215ENST00000555259 LIMS3P0CW19 117 aa7.04□□□□□ -1.28
SCFD1-215ENST00000555259 LIMS4P0CW20 117 aa7.04□□□□□ -1.28
SCFD1-215ENST00000555259 HLA-DRB3P79483 266 aa7.04□□□□□ -1.28
SCFD1-215ENST00000555259 CBX3Q13185 183 aa7.04□□□□□ -1.28
SCFD1-215ENST00000555259 C10orf55Q5SWW7 151 aa7.04□□□□□ -1.28
SCFD1-215ENST00000555259 SLC25A42Q86VD7 318 aa7.04□□□□□ -1.28
SCFD1-215ENST00000555259 POM121L12Q8N7R1 296 aa7.04□□□□□ -1.28
SCFD1-215ENST00000555259 CD300LFQ8TDQ1 290 aa7.04□□□□□ -1.28
SCFD1-215ENST00000555259 SMIM19Q96E16 107 aa7.04□□□□□ -1.28
SCFD1-215ENST00000555259 HRH4Q9H3N8 390 aa7.04□□□□□ -1.28
SCFD1-215ENST00000555259 ZNF430Q9H8G1 570 aaPredicted RBP7.04□□□□□ -1.28
SCFD1-215ENST00000555259 AMBNQ9NP70 447 aa7.04□□□□□ -1.28
SCFD1-215ENST00000555259 MED4Q9NPJ6 270 aa7.04□□□□□ -1.28
SCFD1-215ENST00000555259 OAZ3Q9UMX2 235 aa7.04□□□□□ -1.28
SCFD1-215ENST00000555259 ZNF257Q9Y2Q1 563 aa7.04□□□□□ -1.28
SCFD1-215ENST00000555259 DMBT1Q9UGM3 2413 aaPredicted RBP7.04□□□□□ -1.28
SCFD1-215ENST00000555259 TRBV6-6A0A0A6YYG2 114 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 A0A1W2PPK0 400 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 ACTL6BO94805 426 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 HTR2CP28335 458 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 ADMP35318 185 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 RPS11P62280 158 aaKnown RBP eCLIP7.03□□□□□ -1.28
SCFD1-215ENST00000555259 TAGLNQ01995 201 aaKnown RBP7.03□□□□□ -1.28
SCFD1-215ENST00000555259 MED21Q13503 144 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 RTL8BQ17RB0 113 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 LGALS9BQ3B8N2 356 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 Q499Y3 187 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 PVRIGQ6DKI7 326 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 CEACAM19Q7Z692 300 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 APRG1Q8IVJ8 170 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 SETD9Q8NE22 299 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 OR52I1Q8NGK6 324 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 OR4A5Q8NH83 315 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 HDHD3Q9BSH5 251 aaPredicted RBP7.03□□□□□ -1.28
SCFD1-215ENST00000555259 C6orf62Q9GZU0 229 aaPredicted RBP7.03□□□□□ -1.28
SCFD1-215ENST00000555259 SDHAF2Q9NX18 166 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 RDH8Q9NYR8 311 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 GHRLQ9UBU3 117 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 DNAH5Q8TE73 4624 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms