RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 PHF13Q86YI8 300 aaPredicted RBP3.29□□□□□ -1.88
VRK1-203ENST00000555067 SGPP2Q8IWX5 399 aa3.29□□□□□ -1.88
VRK1-203ENST00000555067 AMN1Q8IY45 258 aa3.29□□□□□ -1.88
VRK1-203ENST00000555067 ANKRD29Q8N6D5 301 aa3.29□□□□□ -1.88
VRK1-203ENST00000555067 ZFP62Q8NB50 900 aaPredicted RBP3.29□□□□□ -1.88
VRK1-203ENST00000555067 OR11G2Q8NGC1 345 aa3.29□□□□□ -1.88
VRK1-203ENST00000555067 TRIB3Q96RU7 358 aa3.29□□□□□ -1.88
VRK1-203ENST00000555067 TBX5Q99593 518 aa3.29□□□□□ -1.88
VRK1-203ENST00000555067 CCL13Q99616 98 aa3.29□□□□□ -1.88
VRK1-203ENST00000555067 MIXL1Q9H2W2 232 aa3.29□□□□□ -1.88
VRK1-203ENST00000555067 LINC00574Q9H8X3 128 aa3.29□□□□□ -1.88
VRK1-203ENST00000555067 KCNIP2Q9NS61 270 aa3.29□□□□□ -1.88
VRK1-203ENST00000555067 ROBO3Q96MS0 1386 aa3.28□□□□□ -1.88
VRK1-203ENST00000555067 IGHV3-21A0A0B4J1V1 117 aa3.28□□□□□ -1.88
VRK1-203ENST00000555067 IGHV1-69-2A0A0G2JMI3 117 aa3.28□□□□□ -1.88
VRK1-203ENST00000555067 TMEM150BA6NC51 233 aa3.28□□□□□ -1.88
VRK1-203ENST00000555067 PINLYPA6NC86 204 aa3.28□□□□□ -1.88
VRK1-203ENST00000555067 OR11H12B2RN74 326 aa3.28□□□□□ -1.88
VRK1-203ENST00000555067 K7ERS5 55 aa3.28□□□□□ -1.88
VRK1-203ENST00000555067 GPR31O00270 319 aa3.28□□□□□ -1.88
VRK1-203ENST00000555067 GYPCP04921 128 aa3.28□□□□□ -1.88
VRK1-203ENST00000555067 INAFM2P0DMQ5 153 aa3.28□□□□□ -1.88
VRK1-203ENST00000555067 IDO1P14902 403 aa3.28□□□□□ -1.88
VRK1-203ENST00000555067 ZNF32P17041 273 aa3.28□□□□□ -1.88
VRK1-203ENST00000555067 PPP1CCP36873 323 aaKnown RBP3.28□□□□□ -1.88
VRK1-203ENST00000555067 TCTAP57738 103 aa3.28□□□□□ -1.88
VRK1-203ENST00000555067 Q5W150 140 aa3.28□□□□□ -1.88
VRK1-203ENST00000555067 ADM2Q7Z4H4 148 aa3.28□□□□□ -1.88
VRK1-203ENST00000555067 ZNF664Q8N3J9 261 aa3.28□□□□□ -1.88
VRK1-203ENST00000555067 OR11H1Q8NG94 326 aa3.28□□□□□ -1.88
VRK1-203ENST00000555067 OR11H2Q8NH07 326 aa3.28□□□□□ -1.88
VRK1-203ENST00000555067 FRZBQ92765 325 aa3.28□□□□□ -1.88
VRK1-203ENST00000555067 RBPMSQ93062 196 aaKnown RBP3.28□□□□□ -1.88
VRK1-203ENST00000555067 GNPNAT1Q96EK6 184 aaPredicted RBP3.28□□□□□ -1.88
VRK1-203ENST00000555067 L3HYPDHQ96EM0 354 aa3.28□□□□□ -1.88
VRK1-203ENST00000555067 TSPAN32Q96QS1 320 aa3.28□□□□□ -1.88
VRK1-203ENST00000555067 CISHQ9NSE2 258 aa3.28□□□□□ -1.88
VRK1-203ENST00000555067 PYCARDQ9ULZ3 195 aa3.28□□□□□ -1.88
VRK1-203ENST00000555067 TRIP11Q15643 1979 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 HECW1Q76N89 1606 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 IGHV3OR15-7A0A075B7D8 119 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 LST1O00453 97 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 COX7A2LO14548 114 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 PDYNP01213 254 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 IGHV1-46P01743 117 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 IGKV3-11P04433 115 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 CRHP06850 196 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 GUSBP08236 651 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 LINC00869P0C866 280 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 SULT1A3P0DMM9 295 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 SULT1A4P0DMN0 295 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 OPRM1P35372 400 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 FGF12P61328 243 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 APOFQ13790 326 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 NANOGP8Q6NSW7 305 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 PRSS54Q6PEW0 395 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 GOLT1AQ6ZVE7 132 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 GRINAQ7Z429 371 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 MKXQ8IYA7 352 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 MIR7-3HGQ8N6C7 128 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 GDPD1Q8N9F7 314 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 OR9A2Q8NGT5 310 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 OR10A6Q8NH74 314 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 CT55Q8WUE5 264 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 RNF5Q99942 180 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 PHLDA3Q9Y5J5 127 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 RFNGQ9Y644 331 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 DOCK3Q8IZD9 2030 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 NUP205Q92621 2012 aa3.27□□□□□ -1.89
VRK1-203ENST00000555067 DOCK5Q9H7D0 1870 aa3.26□□□□□ -1.89
VRK1-203ENST00000555067 A8MUN3 132 aa3.26□□□□□ -1.89
VRK1-203ENST00000555067 A8MWP4 228 aa3.26□□□□□ -1.89
VRK1-203ENST00000555067 IGLL5B9A064 214 aa3.26□□□□□ -1.89
VRK1-203ENST00000555067 HMGB3O15347 200 aaKnown RBP3.26□□□□□ -1.89
VRK1-203ENST00000555067 MFSD11O43934 449 aa3.26□□□□□ -1.89
VRK1-203ENST00000555067 CRYZL1O95825 349 aa3.26□□□□□ -1.89
VRK1-203ENST00000555067 IGKV1D-33P01593 117 aa3.26□□□□□ -1.89
VRK1-203ENST00000555067 IGKV1-33P01594 117 aa3.26□□□□□ -1.89
VRK1-203ENST00000555067 TRGV3P03979 118 aa3.26□□□□□ -1.89
VRK1-203ENST00000555067 SERPINE1P05121 402 aa3.26□□□□□ -1.89
VRK1-203ENST00000555067 PTHLHP12272 177 aa3.26□□□□□ -1.89
VRK1-203ENST00000555067 GABRA4P48169 554 aa3.26□□□□□ -1.89
VRK1-203ENST00000555067 ENDOGQ14249 297 aaKnown RBP3.26□□□□□ -1.89
VRK1-203ENST00000555067 C12orf74Q32Q52 190 aa3.26□□□□□ -1.89
VRK1-203ENST00000555067 C9orf64Q5T6V5 341 aa3.26□□□□□ -1.89
VRK1-203ENST00000555067 SMARCD3Q6STE5 483 aa3.26□□□□□ -1.89
VRK1-203ENST00000555067 STX19Q8N4C7 294 aa3.26□□□□□ -1.89
VRK1-203ENST00000555067 RAB2BQ8WUD1 216 aa3.26□□□□□ -1.89
VRK1-203ENST00000555067 DYDC1Q8WWB3 177 aa3.26□□□□□ -1.89
VRK1-203ENST00000555067 ERMAPQ96PL5 475 aaPredicted RBP3.26□□□□□ -1.89
VRK1-203ENST00000555067 GABARAPL1Q9H0R8 117 aa3.26□□□□□ -1.89
VRK1-203ENST00000555067 OR2D2Q9H210 308 aa3.26□□□□□ -1.89
VRK1-203ENST00000555067 PRTFDC1Q9NRG1 225 aa3.26□□□□□ -1.89
VRK1-203ENST00000555067 TAAR3PQ9P1P4 343 aa3.26□□□□□ -1.89
VRK1-203ENST00000555067 MYH3P11055 1940 aa3.26□□□□□ -1.89
VRK1-203ENST00000555067 MIA2Q96PC5 1412 aa3.26□□□□□ -1.89
VRK1-203ENST00000555067 ATAD5Q96QE3 1844 aa3.26□□□□□ -1.89
VRK1-203ENST00000555067 TICRRQ7Z2Z1 1910 aa3.25□□□□□ -1.89
VRK1-203ENST00000555067 RPRD2Q5VT52 1461 aaKnown RBP3.25□□□□□ -1.89
VRK1-203ENST00000555067 TRAPPC13A5PLN9 417 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms