RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 UCP3P55916 312 aa8.41□□□□□ -1.06
TMEM260-206ENST00000555046 FXYD4P59646 89 aa8.41□□□□□ -1.06
TMEM260-206ENST00000555046 TMEM267Q0VDI3 215 aaPredicted RBP8.41□□□□□ -1.06
TMEM260-206ENST00000555046 C5orf64Q2M2E5 130 aa8.41□□□□□ -1.06
TMEM260-206ENST00000555046 VMA21Q3ZAQ7 101 aa8.41□□□□□ -1.06
TMEM260-206ENST00000555046 PRR31Q5SQ13 230 aa8.41□□□□□ -1.06
TMEM260-206ENST00000555046 ZNF660Q6AZW8 331 aaPredicted RBP8.41□□□□□ -1.06
TMEM260-206ENST00000555046 GLDNQ6ZMI3 551 aaPredicted RBP8.41□□□□□ -1.06
TMEM260-206ENST00000555046 MFSD4AQ8N468 514 aa8.41□□□□□ -1.06
TMEM260-206ENST00000555046 FAM71E2Q8N5Q1 922 aa8.41□□□□□ -1.06
TMEM260-206ENST00000555046 COMMD1Q8N668 190 aa8.41□□□□□ -1.06
TMEM260-206ENST00000555046 TCTEX1D1Q8N7M0 179 aa8.41□□□□□ -1.06
TMEM260-206ENST00000555046 BVESQ8NE79 360 aa8.41□□□□□ -1.06
TMEM260-206ENST00000555046 SMIM4Q8WVI0 70 aa8.41□□□□□ -1.06
TMEM260-206ENST00000555046 WFDC12Q8WWY7 111 aa8.41□□□□□ -1.06
TMEM260-206ENST00000555046 DEDD2Q8WXF8 326 aa8.41□□□□□ -1.06
TMEM260-206ENST00000555046 TAF15Q92804 592 aaKnown RBP eCLIP8.41□□□□□ -1.06
TMEM260-206ENST00000555046 MOB3AQ96BX8 217 aa8.41□□□□□ -1.06
TMEM260-206ENST00000555046 SOSTQ9BQB4 213 aa8.41□□□□□ -1.06
TMEM260-206ENST00000555046 WNT10AQ9GZT5 417 aa8.41□□□□□ -1.06
TMEM260-206ENST00000555046 SERTAD4Q9NUC0 356 aa8.41□□□□□ -1.06
TMEM260-206ENST00000555046 SIGLEC9Q9Y336 463 aa8.41□□□□□ -1.06
TMEM260-206ENST00000555046 IGKV1D-13A0A0B4J2D9 117 aa8.4□□□□□ -1.06
TMEM260-206ENST00000555046 DISC1C4P0D8 188 aa8.4□□□□□ -1.06
TMEM260-206ENST00000555046 RAB3DO95716 219 aa8.4□□□□□ -1.06
TMEM260-206ENST00000555046 HRASP01112 189 aa8.4□□□□□ -1.06
TMEM260-206ENST00000555046 HLA-DRB1P01911 266 aa8.4□□□□□ -1.06
TMEM260-206ENST00000555046 OPN1MWP04001 364 aa8.4□□□□□ -1.06
TMEM260-206ENST00000555046 CD74P04233 296 aa8.4□□□□□ -1.06
TMEM260-206ENST00000555046 OPN1MW2P0DN77 364 aa8.4□□□□□ -1.06
TMEM260-206ENST00000555046 OPN1MW3P0DN78 364 aa8.4□□□□□ -1.06
TMEM260-206ENST00000555046 IGKV1-13P0DP09 117 aa8.4□□□□□ -1.06
TMEM260-206ENST00000555046 FAUP35544 74 aaKnown RBP8.4□□□□□ -1.06
TMEM260-206ENST00000555046 ECI1P42126 302 aa8.4□□□□□ -1.06
TMEM260-206ENST00000555046 TMEM177Q53S58 311 aa8.4□□□□□ -1.06
TMEM260-206ENST00000555046 PYDC2Q56P42 97 aa8.4□□□□□ -1.06
TMEM260-206ENST00000555046 STEAP1BQ6NZ63 245 aa8.4□□□□□ -1.06
TMEM260-206ENST00000555046 ZNF562Q6V9R5 426 aa8.4□□□□□ -1.06
TMEM260-206ENST00000555046 KCTD9Q7L273 389 aa8.4□□□□□ -1.06
TMEM260-206ENST00000555046 SLC38A6Q8IZM9 456 aa8.4□□□□□ -1.06
TMEM260-206ENST00000555046 KLHDC1Q8N7A1 406 aa8.4□□□□□ -1.06
TMEM260-206ENST00000555046 TEX45Q8NA69 505 aa8.4□□□□□ -1.06
TMEM260-206ENST00000555046 OR4S2Q8NH73 311 aa8.4□□□□□ -1.06
TMEM260-206ENST00000555046 TERB2Q8NHR7 220 aa8.4□□□□□ -1.06
TMEM260-206ENST00000555046 VSTM2AQ8TAG5 236 aa8.4□□□□□ -1.06
TMEM260-206ENST00000555046 ZFAND1Q8TCF1 268 aa8.4□□□□□ -1.06
TMEM260-206ENST00000555046 TCTEX1D2Q8WW35 142 aa8.4□□□□□ -1.06
TMEM260-206ENST00000555046 SCGB3A2Q96PL1 93 aa8.4□□□□□ -1.06
TMEM260-206ENST00000555046 CITED1Q99966 193 aa8.4□□□□□ -1.06
TMEM260-206ENST00000555046 THAP7Q9BT49 309 aaPredicted RBP8.4□□□□□ -1.06
TMEM260-206ENST00000555046 CCL28Q9NRJ3 127 aa8.4□□□□□ -1.06
TMEM260-206ENST00000555046 M0QZ24 198 aa8.39□□□□□ -1.07
TMEM260-206ENST00000555046 GPR31O00270 319 aa8.39□□□□□ -1.07
TMEM260-206ENST00000555046 RBFOX2O43251 390 aaKnown RBP eCLIP8.39□□□□□ -1.07
TMEM260-206ENST00000555046 FCGR3BO75015 233 aa8.39□□□□□ -1.07
TMEM260-206ENST00000555046 CD3DP04234 171 aa8.39□□□□□ -1.07
TMEM260-206ENST00000555046 IGKV1-16P04430 117 aa8.39□□□□□ -1.07
TMEM260-206ENST00000555046 IGF1P05019 195 aa8.39□□□□□ -1.07
TMEM260-206ENST00000555046 AKAIN1P0CW23 69 aa8.39□□□□□ -1.07
TMEM260-206ENST00000555046 VDAC1P21796 283 aa8.39□□□□□ -1.07
TMEM260-206ENST00000555046 CD40LGP29965 261 aa8.39□□□□□ -1.07
TMEM260-206ENST00000555046 GNRHRP30968 328 aa8.39□□□□□ -1.07
TMEM260-206ENST00000555046 ETV6P41212 452 aa8.39□□□□□ -1.07
TMEM260-206ENST00000555046 PSG5Q15238 335 aa8.39□□□□□ -1.07
TMEM260-206ENST00000555046 LINC00299Q6ZSB3 139 aa8.39□□□□□ -1.07
TMEM260-206ENST00000555046 OR5AU1Q8NGC0 362 aa8.39□□□□□ -1.07
TMEM260-206ENST00000555046 OR4X2Q8NGF9 303 aa8.39□□□□□ -1.07
TMEM260-206ENST00000555046 DDB2Q92466 427 aa8.39□□□□□ -1.07
TMEM260-206ENST00000555046 ZNF486Q96H40 463 aaPredicted RBP8.39□□□□□ -1.07
TMEM260-206ENST00000555046 RITA1Q96K30 269 aa8.39□□□□□ -1.07
TMEM260-206ENST00000555046 HARBI1Q96MB7 349 aa8.39□□□□□ -1.07
TMEM260-206ENST00000555046 TMEM68Q96MH6 324 aa8.39□□□□□ -1.07
TMEM260-206ENST00000555046 PRRT1Q99946 306 aa8.39□□□□□ -1.07
TMEM260-206ENST00000555046 METTL1Q9UBP6 276 aaKnown RBP8.39□□□□□ -1.07
TMEM260-206ENST00000555046 SCP2D1Q9UJQ7 156 aa8.39□□□□□ -1.07
TMEM260-206ENST00000555046 ZNF580Q9UK33 172 aa8.39□□□□□ -1.07
TMEM260-206ENST00000555046 PSMB11A5LHX3 300 aa8.38□□□□□ -1.07
TMEM260-206ENST00000555046 LINC00473A8K010 186 aa8.38□□□□□ -1.07
TMEM260-206ENST00000555046 FBXO24O75426 580 aa8.38□□□□□ -1.07
TMEM260-206ENST00000555046 PGLYRP1O75594 196 aaPredicted RBP8.38□□□□□ -1.07
TMEM260-206ENST00000555046 ACTL6BO94805 426 aa8.38□□□□□ -1.07
TMEM260-206ENST00000555046 CNIH1O95406 144 aa8.38□□□□□ -1.07
TMEM260-206ENST00000555046 CRYZL1O95825 349 aa8.38□□□□□ -1.07
TMEM260-206ENST00000555046 HPRT1P00492 218 aa8.38□□□□□ -1.07
TMEM260-206ENST00000555046 IGLV2-14P01704 120 aa8.38□□□□□ -1.07
TMEM260-206ENST00000555046 INPP1P49441 399 aa8.38□□□□□ -1.07
TMEM260-206ENST00000555046 UBE2KP61086 200 aa8.38□□□□□ -1.07
TMEM260-206ENST00000555046 DGCR2P98153 550 aa8.38□□□□□ -1.07
TMEM260-206ENST00000555046 ZNF45Q02386 682 aa8.38□□□□□ -1.07
TMEM260-206ENST00000555046 RNASE12Q5GAN4 147 aaKnown RBP8.38□□□□□ -1.07
TMEM260-206ENST00000555046 AADACL3Q5VUY0 350 aa8.38□□□□□ -1.07
TMEM260-206ENST00000555046 TEX38Q6PEX7 206 aa8.38□□□□□ -1.07
TMEM260-206ENST00000555046 Q6ZS46 218 aa8.38□□□□□ -1.07
TMEM260-206ENST00000555046 CCDC190Q86UF4 302 aa8.38□□□□□ -1.07
TMEM260-206ENST00000555046 PPP1R27Q86WC6 154 aa8.38□□□□□ -1.07
TMEM260-206ENST00000555046 Q8N402 240 aa8.38□□□□□ -1.07
TMEM260-206ENST00000555046 STPG2Q8N412 459 aa8.38□□□□□ -1.07
TMEM260-206ENST00000555046 OR6Q1Q8NGQ2 317 aa8.38□□□□□ -1.07
TMEM260-206ENST00000555046 OR51J1Q9H342 316 aa8.38□□□□□ -1.07
TMEM260-206ENST00000555046 FBXL15Q9H469 300 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms