RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 ETV3LQ6ZN32 361 aa17.59■□□□□ 0.41
ARHGEF40-204ENST00000555038 SPACA3Q8IXA5 215 aa17.59■□□□□ 0.41
ARHGEF40-204ENST00000555038 CISD2Q8N5K1 135 aaKnown RBP17.59■□□□□ 0.41
ARHGEF40-204ENST00000555038 OR4S2Q8NH73 311 aa17.59■□□□□ 0.41
ARHGEF40-204ENST00000555038 DDB2Q92466 427 aa17.59■□□□□ 0.41
ARHGEF40-204ENST00000555038 THBS3P49746 956 aa17.58■□□□□ 0.41
ARHGEF40-204ENST00000555038 ZNF726P1Q15940 193 aa17.58■□□□□ 0.41
ARHGEF40-204ENST00000555038 HIST1H2BAQ96A08 127 aa17.58■□□□□ 0.41
ARHGEF40-204ENST00000555038 VSIRQ9H7M9 311 aa17.58■□□□□ 0.41
ARHGEF40-204ENST00000555038 A0A087WWC5 75 aa17.58■□□□□ 0.4
ARHGEF40-204ENST00000555038 H3BQ15 152 aa17.58■□□□□ 0.4
ARHGEF40-204ENST00000555038 NDUFS6O75380 124 aaKnown RBP17.58■□□□□ 0.4
ARHGEF40-204ENST00000555038 OR9G9P0C7N8 305 aa17.58■□□□□ 0.4
ARHGEF40-204ENST00000555038 TAGLN2P37802 199 aaKnown RBP17.58■□□□□ 0.4
ARHGEF40-204ENST00000555038 ZNF134P52741 427 aa17.58■□□□□ 0.4
ARHGEF40-204ENST00000555038 TBR1Q16650 682 aa17.58■□□□□ 0.4
ARHGEF40-204ENST00000555038 SLC35E3Q7Z769 313 aa17.58■□□□□ 0.4
ARHGEF40-204ENST00000555038 OR4A16Q8NH70 328 aa17.58■□□□□ 0.4
ARHGEF40-204ENST00000555038 ZDHHC16Q969W1 377 aa17.58■□□□□ 0.4
ARHGEF40-204ENST00000555038 QTRT1Q9BXR0 403 aaKnown RBP17.58■□□□□ 0.4
ARHGEF40-204ENST00000555038 BIN3Q9NQY0 253 aa17.58■□□□□ 0.4
ARHGEF40-204ENST00000555038 GNG13Q9P2W3 67 aa17.58■□□□□ 0.4
ARHGEF40-204ENST00000555038 PUS1Q9Y606 427 aaKnown RBP eCLIP17.58■□□□□ 0.4
ARHGEF40-204ENST00000555038 MAP1LC3B2A6NCE7 125 aa17.57■□□□□ 0.4
ARHGEF40-204ENST00000555038 VSTM5A8MXK1 200 aa17.57■□□□□ 0.4
ARHGEF40-204ENST00000555038 GFRA3O60609 400 aa17.57■□□□□ 0.4
ARHGEF40-204ENST00000555038 CYB5R3P00387 301 aaPredicted RBP17.57■□□□□ 0.4
ARHGEF40-204ENST00000555038 MAS1LP35410 378 aa17.57■□□□□ 0.4
ARHGEF40-204ENST00000555038 RAB5BP61020 215 aa17.57■□□□□ 0.4
ARHGEF40-204ENST00000555038 ZNF429Q86V71 674 aa17.57■□□□□ 0.4
ARHGEF40-204ENST00000555038 CYB561D1Q8N8Q1 229 aa17.57■□□□□ 0.4
ARHGEF40-204ENST00000555038 NIPSNAP3BQ9BS92 247 aa17.57■□□□□ 0.4
ARHGEF40-204ENST00000555038 C20orf24Q9BUV8 137 aa17.57■□□□□ 0.4
ARHGEF40-204ENST00000555038 MAP1LC3BQ9GZQ8 125 aa17.57■□□□□ 0.4
ARHGEF40-204ENST00000555038 IDI2-AS1Q9NZ38 188 aa17.57■□□□□ 0.4
ARHGEF40-204ENST00000555038 KLF2Q9Y5W3 355 aaPredicted RBP17.57■□□□□ 0.4
ARHGEF40-204ENST00000555038 GVINP1Q7Z2Y8 2422 aa17.57■□□□□ 0.4
ARHGEF40-204ENST00000555038 CFAP47Q6ZTR5 3102 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 CADP27708 2225 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 ASPMQ8IZT6 3477 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 NKX6-3A6NJ46 265 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 C17orf100A8MU93 164 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 C17orf112F2Z3M2 114 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 K7ENP7 123 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 NDUFA2O43678 99 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 IFNA17P01571 189 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 ARG1P05089 322 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 MDKP21741 143 aaPredicted RBP17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 AKR1C3P42330 323 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 LINC00205P59089 165 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 RPL39P5Q59GN2 51 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 FAM201AQ5SY85 155 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 LCN15Q6UWW0 184 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 WFDC8Q8IUA0 241 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 OR10A7Q8NGE5 316 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 TVP23CQ96ET8 276 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 ZNF251Q9BRH9 671 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 GGACTQ9BVM4 153 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 DPRXA6NFQ7 191 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 FGF7P21781 194 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 RBPJQ06330 500 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 FOXC1Q12948 553 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 ADIPOQQ15848 244 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 CT45A1Q5HYN5 189 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 RBMS3Q6XE24 437 aaKnown RBP17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 ZNF709Q8N972 641 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 ZNF439Q8NDP4 499 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 CT45A3Q8NHU0 189 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 SLC39A9Q9NUM3 307 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 VAX2Q9UIW0 290 aa17.56■□□□□ 0.4
ARHGEF40-204ENST00000555038 CTXND1A0A1B0GTU2 59 aa17.55■□□□□ 0.4
ARHGEF40-204ENST00000555038 C15orf62A8K5M9 175 aa17.55■□□□□ 0.4
ARHGEF40-204ENST00000555038 B4DEV8 164 aa17.55■□□□□ 0.4
ARHGEF40-204ENST00000555038 SELLP14151 372 aa17.55■□□□□ 0.4
ARHGEF40-204ENST00000555038 ELLP55199 621 aaPredicted RBP17.55■□□□□ 0.4
ARHGEF40-204ENST00000555038 TRGV8A0A0C4DH27 118 aa17.54■□□□□ 0.4
ARHGEF40-204ENST00000555038 hADV38S2A0JD32 116 aa17.54■□□□□ 0.4
ARHGEF40-204ENST00000555038 C1orf196B1AJZ1 125 aa17.54■□□□□ 0.4
ARHGEF40-204ENST00000555038 SLC31A2O15432 143 aa17.54■□□□□ 0.4
ARHGEF40-204ENST00000555038 THBDP07204 575 aa17.54■□□□□ 0.4
ARHGEF40-204ENST00000555038 OR4A8P0C604 315 aa17.54■□□□□ 0.4
ARHGEF40-204ENST00000555038 RELBQ01201 579 aa17.54■□□□□ 0.4
ARHGEF40-204ENST00000555038 PNRC1Q12796 327 aaPredicted RBP17.54■□□□□ 0.4
ARHGEF40-204ENST00000555038 RAB39BQ96DA2 213 aa17.54■□□□□ 0.4
ARHGEF40-204ENST00000555038 MALSU1Q96EH3 234 aa17.54■□□□□ 0.4
ARHGEF40-204ENST00000555038 PLPPR2Q96GM1 343 aa17.54■□□□□ 0.4
ARHGEF40-204ENST00000555038 CCL13Q99616 98 aa17.54■□□□□ 0.4
ARHGEF40-204ENST00000555038 NPCDR1Q9BY65 106 aa17.54■□□□□ 0.4
ARHGEF40-204ENST00000555038 NGBQ9NPG2 151 aa17.54■□□□□ 0.4
ARHGEF40-204ENST00000555038 CEP250Q9BV73 2442 aa17.54■□□□□ 0.4
ARHGEF40-204ENST00000555038 TRAV38-1A0A0B4J264 116 aa17.53■□□□□ 0.4
ARHGEF40-204ENST00000555038 MPDU1O75352 247 aa17.53■□□□□ 0.4
ARHGEF40-204ENST00000555038 GYPAP02724 150 aa17.53■□□□□ 0.4
ARHGEF40-204ENST00000555038 MEF2CQ06413 473 aaPredicted RBP17.53■□□□□ 0.4
ARHGEF40-204ENST00000555038 TCF23Q7RTU1 214 aa17.53■□□□□ 0.4
ARHGEF40-204ENST00000555038 C1orf87Q8N0U7 546 aa17.53■□□□□ 0.4
ARHGEF40-204ENST00000555038 RPP25LQ8N5L8 163 aaKnown RBP17.53■□□□□ 0.4
ARHGEF40-204ENST00000555038 LHX4Q969G2 390 aa17.53■□□□□ 0.4
ARHGEF40-204ENST00000555038 SIRT7Q9NRC8 400 aa17.53■□□□□ 0.4
ARHGEF40-204ENST00000555038 TMEM140Q9NV12 185 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms