RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 HRH4Q9H3N8 390 aa9.19□□□□□ -0.94
SHMT2-216ENST00000554975 UNKLQ9H9P5 680 aaKnown RBP9.19□□□□□ -0.94
SHMT2-216ENST00000554975 COA4Q9NYJ1 87 aa9.19□□□□□ -0.94
SHMT2-216ENST00000554975 WSB1Q9Y6I7 421 aa9.19□□□□□ -0.94
SHMT2-216ENST00000554975 B4DSR2 109 aa9.18□□□□□ -0.94
SHMT2-216ENST00000554975 TOR1AO14656 332 aa9.18□□□□□ -0.94
SHMT2-216ENST00000554975 CDIPTO14735 213 aa9.18□□□□□ -0.94
SHMT2-216ENST00000554975 TSPAN4O14817 238 aa9.18□□□□□ -0.94
SHMT2-216ENST00000554975 IFNA5P01569 189 aa9.18□□□□□ -0.94
SHMT2-216ENST00000554975 ZFP36P26651 326 aaKnown RBP9.18□□□□□ -0.94
SHMT2-216ENST00000554975 HBG1P69891 147 aa9.18□□□□□ -0.94
SHMT2-216ENST00000554975 HBG2P69892 147 aa9.18□□□□□ -0.94
SHMT2-216ENST00000554975 ZNF616Q08AN1 781 aa9.18□□□□□ -0.94
SHMT2-216ENST00000554975 MSMPQ1L6U9 139 aa9.18□□□□□ -0.94
SHMT2-216ENST00000554975 ACP7Q6ZNF0 438 aa9.18□□□□□ -0.94
SHMT2-216ENST00000554975 LRP11Q86VZ4 500 aa9.18□□□□□ -0.94
SHMT2-216ENST00000554975 TMEM252Q8N6L7 170 aa9.18□□□□□ -0.94
SHMT2-216ENST00000554975 ZNF645Q8N7E2 425 aa9.18□□□□□ -0.94
SHMT2-216ENST00000554975 CLDND2Q8NHS1 167 aa9.18□□□□□ -0.94
SHMT2-216ENST00000554975 PLPPR1Q8TBJ4 325 aa9.18□□□□□ -0.94
SHMT2-216ENST00000554975 EDARADDQ8WWZ3 215 aa9.18□□□□□ -0.94
SHMT2-216ENST00000554975 ATP5SQ99766 215 aa9.18□□□□□ -0.94
SHMT2-216ENST00000554975 CACFD1Q9UGQ2 172 aa9.18□□□□□ -0.94
SHMT2-216ENST00000554975 MMP24Q9Y5R2 645 aa9.18□□□□□ -0.94
SHMT2-216ENST00000554975 RYR3Q15413 4870 aa9.18□□□□□ -0.94
SHMT2-216ENST00000554975 A0A1B0GW64 132 aa9.17□□□□□ -0.94
SHMT2-216ENST00000554975 ZNF205O95201 554 aa9.17□□□□□ -0.94
SHMT2-216ENST00000554975 GRPP07492 148 aa9.17□□□□□ -0.94
SHMT2-216ENST00000554975 ATF4P18848 351 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-216ENST00000554975 MPV17P39210 176 aa9.17□□□□□ -0.94
SHMT2-216ENST00000554975 KLF3P57682 345 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-216ENST00000554975 ERVS71-1P61550 626 aa9.17□□□□□ -0.94
SHMT2-216ENST00000554975 ALKBH6Q3KRA9 238 aa9.17□□□□□ -0.94
SHMT2-216ENST00000554975 TMEM30BQ3MIR4 351 aa9.17□□□□□ -0.94
SHMT2-216ENST00000554975 OR51H1Q8NH63 302 aa9.17□□□□□ -0.94
SHMT2-216ENST00000554975 NEU4Q8WWR8 484 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-216ENST00000554975 TAF15Q92804 592 aaKnown RBP eCLIP9.17□□□□□ -0.94
SHMT2-216ENST00000554975 MS4A5Q9H3V2 200 aa9.17□□□□□ -0.94
SHMT2-216ENST00000554975 C19orf12Q9NSK7 152 aa9.17□□□□□ -0.94
SHMT2-216ENST00000554975 DOCK11Q5JSL3 2073 aa9.17□□□□□ -0.94
SHMT2-216ENST00000554975 TANC2Q9HCD6 1990 aa9.16□□□□□ -0.94
SHMT2-216ENST00000554975 IGSF23A1L1A6 192 aa9.16□□□□□ -0.94
SHMT2-216ENST00000554975 RNASEK-C17orf49H0YIS7 233 aa9.16□□□□□ -0.94
SHMT2-216ENST00000554975 K7N7A8 449 aa9.16□□□□□ -0.94
SHMT2-216ENST00000554975 MLNRO43193 412 aa9.16□□□□□ -0.94
SHMT2-216ENST00000554975 SPINT2O43291 252 aa9.16□□□□□ -0.94
SHMT2-216ENST00000554975 PTBP3O95758 552 aaKnown RBP9.16□□□□□ -0.94
SHMT2-216ENST00000554975 CD5P06127 495 aa9.16□□□□□ -0.94
SHMT2-216ENST00000554975 MSMBP08118 114 aa9.16□□□□□ -0.94
SHMT2-216ENST00000554975 ADH4P08319 380 aa9.16□□□□□ -0.94
SHMT2-216ENST00000554975 SFTA3P0C7M3 94 aa9.16□□□□□ -0.94
SHMT2-216ENST00000554975 OR8U9P0C7N5 309 aa9.16□□□□□ -0.94
SHMT2-216ENST00000554975 MUC1P15941 1255 aaPredicted RBP9.16□□□□□ -0.94
SHMT2-216ENST00000554975 PAX6P26367 422 aa9.16□□□□□ -0.94
SHMT2-216ENST00000554975 CFHR2P36980 270 aa9.16□□□□□ -0.94
SHMT2-216ENST00000554975 SULT1A1P50225 295 aa9.16□□□□□ -0.94
SHMT2-216ENST00000554975 POLR2GP62487 172 aaKnown RBP eCLIP9.16□□□□□ -0.94
SHMT2-216ENST00000554975 AKR1C8PQ5T2L2 129 aa9.16□□□□□ -0.94
SHMT2-216ENST00000554975 SLC25A24Q6NUK1 477 aa9.16□□□□□ -0.94
SHMT2-216ENST00000554975 WDR82Q6UXN9 313 aa9.16□□□□□ -0.94
SHMT2-216ENST00000554975 ZNF66Q6ZN08 573 aa9.16□□□□□ -0.94
SHMT2-216ENST00000554975 HSD17B11Q8NBQ5 300 aa9.16□□□□□ -0.94
SHMT2-216ENST00000554975 RBMXL1Q96E39 390 aaKnown RBP9.16□□□□□ -0.94
SHMT2-216ENST00000554975 PARD6GQ9BYG4 376 aaPredicted RBP9.16□□□□□ -0.94
SHMT2-216ENST00000554975 NCOR1P1Q9H4R4 102 aa9.16□□□□□ -0.94
SHMT2-216ENST00000554975 OR1A1Q9P1Q5 309 aa9.16□□□□□ -0.94
SHMT2-216ENST00000554975 OR14J1Q9UGF5 321 aa9.16□□□□□ -0.94
SHMT2-216ENST00000554975 ZDHHC8Q9ULC8 765 aa9.16□□□□□ -0.94
SHMT2-216ENST00000554975 PPIAL4AQ9Y536 164 aa9.16□□□□□ -0.94
SHMT2-216ENST00000554975 LOC105371267A0A1B0GV96 52 aa9.15□□□□□ -0.94
SHMT2-216ENST00000554975 SRRM5B3KS81 715 aa9.15□□□□□ -0.94
SHMT2-216ENST00000554975 DNASE2O00115 360 aaPredicted RBP9.15□□□□□ -0.94
SHMT2-216ENST00000554975 OR8U8P0C7N1 319 aa9.15□□□□□ -0.94
SHMT2-216ENST00000554975 PSG2P11465 335 aa9.15□□□□□ -0.94
SHMT2-216ENST00000554975 SNCAP37840 140 aa9.15□□□□□ -0.94
SHMT2-216ENST00000554975 GABRA2P47869 451 aa9.15□□□□□ -0.94
SHMT2-216ENST00000554975 ARHGDIBP52566 201 aa9.15□□□□□ -0.94
SHMT2-216ENST00000554975 FLI1Q01543 452 aaPredicted RBP9.15□□□□□ -0.94
SHMT2-216ENST00000554975 FOXL1Q12952 345 aa9.15□□□□□ -0.94
SHMT2-216ENST00000554975 DHRS7BQ6IAN0 325 aaPredicted RBP9.15□□□□□ -0.94
SHMT2-216ENST00000554975 PUSL1Q8N0Z8 303 aaKnown RBP9.15□□□□□ -0.94
SHMT2-216ENST00000554975 DRAM1Q8N682 238 aa9.15□□□□□ -0.94
SHMT2-216ENST00000554975 OR5C1Q8NGR4 320 aa9.15□□□□□ -0.94
SHMT2-216ENST00000554975 CD300LFQ8TDQ1 290 aa9.15□□□□□ -0.94
SHMT2-216ENST00000554975 C22orf15Q8WYQ4 148 aa9.15□□□□□ -0.94
SHMT2-216ENST00000554975 CIB3Q96Q77 187 aaPredicted RBP9.15□□□□□ -0.94
SHMT2-216ENST00000554975 JMJD8Q96S16 334 aa9.15□□□□□ -0.94
SHMT2-216ENST00000554975 HSD17B10Q99714 261 aaKnown RBP9.15□□□□□ -0.94
SHMT2-216ENST00000554975 PSMG3Q9BT73 122 aaPredicted RBP9.15□□□□□ -0.94
SHMT2-216ENST00000554975 HIPK2Q9H2X6 1198 aa9.15□□□□□ -0.94
SHMT2-216ENST00000554975 KIAA1456Q9P272 454 aa9.15□□□□□ -0.94
SHMT2-216ENST00000554975 JPT1Q9UK76 154 aa9.15□□□□□ -0.94
SHMT2-216ENST00000554975 FAM24AA6NFZ4 105 aa9.14□□□□□ -0.95
SHMT2-216ENST00000554975 MGST3O14880 152 aa9.14□□□□□ -0.95
SHMT2-216ENST00000554975 TXNL1O43396 289 aa9.14□□□□□ -0.95
SHMT2-216ENST00000554975 SYNGR2O43760 224 aa9.14□□□□□ -0.95
SHMT2-216ENST00000554975 SOX15O60248 233 aa9.14□□□□□ -0.95
SHMT2-216ENST00000554975 IGHV3-13P01766 116 aa9.14□□□□□ -0.95
SHMT2-216ENST00000554975 ADCYAP1P18509 176 aa9.14□□□□□ -0.95
SHMT2-216ENST00000554975 TNFSF4P23510 183 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms