RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 TMPRSS7Q7RTY8 843 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 OR2T10Q8NGZ9 312 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 OR1P1Q8NH06 330 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 ZPBPQ9BS86 351 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 APC2O95996 2303 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 A0A1B0GV90 55 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 C11orf94C9JXX5 98 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 C17orf112F2Z3M2 114 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 TIMM8AO60220 97 aaPredicted RBP7.99□□□□□ -1.13
SYNE2-213ENST00000554805 CDC34P49427 236 aaPredicted RBP7.99□□□□□ -1.13
SYNE2-213ENST00000554805 FAM3BP58499 235 aaPredicted RBP7.99□□□□□ -1.13
SYNE2-213ENST00000554805 P2RY6Q15077 328 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 FAM78BQ5VT40 261 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 PRAMEF6Q5VXH4 476 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 WFIKKN1Q96NZ8 548 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 NPIPB11E5RHQ5 1161 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 SS18L1O75177 396 aaPredicted RBP7.99□□□□□ -1.13
SYNE2-213ENST00000554805 AGFG2O95081 481 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 ACOT6Q3I5F7 207 aaPredicted RBP7.99□□□□□ -1.13
SYNE2-213ENST00000554805 KCNIP4Q6PIL6 250 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 TMEM183AQ8IXX5 376 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 GNG12Q9UBI6 72 aa7.99□□□□□ -1.13
SYNE2-213ENST00000554805 SMPD2O60906 423 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 HRASP01112 189 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 SP9P0CG40 484 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 PSG7Q13046 419 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 ATP1A1-AS1Q5TC04 95 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 C14orf144Q96I85 54 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 CIB3Q96Q77 187 aaPredicted RBP7.98□□□□□ -1.13
SYNE2-213ENST00000554805 PATZ1Q9HBE1 687 aaKnown RBP7.98□□□□□ -1.13
SYNE2-213ENST00000554805 HEYLQ9NQ87 328 aaPredicted RBP7.98□□□□□ -1.13
SYNE2-213ENST00000554805 MANBALQ9NQG1 85 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 HSPB7Q9UBY9 170 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 TIMM9Q9Y5J7 89 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 TRAV38-1A0A0B4J264 116 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 ZNF320A2RRD8 509 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 C1QTNF9BB2RNN3 333 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 TMEM250H0YL14 139 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 AMBPP02760 352 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 PFN1P07737 140 aaKnown RBP7.98□□□□□ -1.13
SYNE2-213ENST00000554805 GZMHP20718 246 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 SSTR5P35346 364 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 PMS2P11Q13670 270 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 PRAMEF5Q5TYX0 476 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 TMEM204Q9BSN7 226 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 DCTN5Q9BTE1 182 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 MSL2Q9HCI7 577 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 OOEPA6NGQ2 149 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 FCGR3BO75015 233 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 RNF224P0DH78 156 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 MPV17P39210 176 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 PDLIM3Q53GG5 364 aaPredicted RBP7.98□□□□□ -1.13
SYNE2-213ENST00000554805 GCSAMLQ5JQS6 135 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 ZBTB34Q8NCN2 500 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 OR51G1Q8NGK1 321 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 TAAR6Q96RI8 345 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 NPCDR1Q9BY65 106 aa7.98□□□□□ -1.13
SYNE2-213ENST00000554805 ADGRG4Q8IZF6 3080 aa7.97□□□□□ -1.13
SYNE2-213ENST00000554805 C19orf67A6NJJ6 358 aa7.97□□□□□ -1.13
SYNE2-213ENST00000554805 ACP1P24666 158 aa7.97□□□□□ -1.13
SYNE2-213ENST00000554805 UNQ6494/PRO21346Q6UXR6 183 aa7.97□□□□□ -1.13
SYNE2-213ENST00000554805 REC114Q7Z4M0 266 aa7.97□□□□□ -1.13
SYNE2-213ENST00000554805 HINT2Q9BX68 163 aa7.97□□□□□ -1.13
SYNE2-213ENST00000554805 MBNL3Q9NUK0 354 aaKnown RBP7.97□□□□□ -1.13
SYNE2-213ENST00000554805 WIPI2Q9Y4P8 454 aa7.97□□□□□ -1.13
SYNE2-213ENST00000554805 AKAP6Q13023 2319 aa7.97□□□□□ -1.13
SYNE2-213ENST00000554805 SPINT2O43291 252 aa7.97□□□□□ -1.13
SYNE2-213ENST00000554805 GPR12P47775 334 aa7.97□□□□□ -1.13
SYNE2-213ENST00000554805 ZNF146Q15072 292 aa7.97□□□□□ -1.13
SYNE2-213ENST00000554805 OR4A16Q8NH70 328 aa7.97□□□□□ -1.13
SYNE2-213ENST00000554805 TRIB1Q96RU8 372 aa7.97□□□□□ -1.13
SYNE2-213ENST00000554805 NDUFB4O95168 129 aa7.97□□□□□ -1.13
SYNE2-213ENST00000554805 SCGB1D1O95968 90 aa7.97□□□□□ -1.13
SYNE2-213ENST00000554805 ERVK11-1P61568 191 aa7.97□□□□□ -1.13
SYNE2-213ENST00000554805 ACSF3Q4G176 576 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-213ENST00000554805 KLF14Q8TD94 323 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-213ENST00000554805 R3HDM4Q96D70 268 aa7.97□□□□□ -1.13
SYNE2-213ENST00000554805 ANAPC16Q96DE5 110 aa7.97□□□□□ -1.13
SYNE2-213ENST00000554805 FER1L6-AS2Q96M78 137 aa7.97□□□□□ -1.13
SYNE2-213ENST00000554805 QTRT1Q9BXR0 403 aaKnown RBP7.97□□□□□ -1.13
SYNE2-213ENST00000554805 MED13LQ71F56 2210 aa7.96□□□□□ -1.13
SYNE2-213ENST00000554805 RAB29O14966 203 aa7.96□□□□□ -1.13
SYNE2-213ENST00000554805 CLDN14O95500 239 aa7.96□□□□□ -1.13
SYNE2-213ENST00000554805 ATP5G3P48201 142 aa7.96□□□□□ -1.13
SYNE2-213ENST00000554805 ZNF766Q5HY98 468 aa7.96□□□□□ -1.13
SYNE2-213ENST00000554805 TMEM18Q96B42 140 aa7.96□□□□□ -1.13
SYNE2-213ENST00000554805 RYDENQ9NUL5 291 aaKnown RBP7.96□□□□□ -1.13
SYNE2-213ENST00000554805 METRNQ9UJH8 293 aa7.96□□□□□ -1.13
SYNE2-213ENST00000554805 M0R1X1 148 aa7.96□□□□□ -1.14
SYNE2-213ENST00000554805 GALR2O43603 387 aaPredicted RBP7.96□□□□□ -1.14
SYNE2-213ENST00000554805 TNFSF15O95150 251 aa7.96□□□□□ -1.14
SYNE2-213ENST00000554805 GCH1P30793 250 aa7.96□□□□□ -1.14
SYNE2-213ENST00000554805 OR13A1Q8NGR1 328 aa7.96□□□□□ -1.14
SYNE2-213ENST00000554805 AGMATQ9BSE5 352 aa7.96□□□□□ -1.14
SYNE2-213ENST00000554805 SPRR3Q9UBC9 169 aa7.96□□□□□ -1.14
SYNE2-213ENST00000554805 TRAPPC1Q9Y5R8 145 aa7.96□□□□□ -1.14
SYNE2-213ENST00000554805 SMG1Q96Q15 3661 aaKnown RBP7.96□□□□□ -1.14
SYNE2-213ENST00000554805 MDFIC2A0A1B0GVS7 189 aa7.95□□□□□ -1.14
SYNE2-213ENST00000554805 PGPEP1LA6NFU8 196 aa7.95□□□□□ -1.14
SYNE2-213ENST00000554805 MARCH11A6NNE9 402 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms