RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 CHIAQ9BZP6 476 aa4.73□□□□□ -1.65
ATXN3-230ENST00000554673 NCOR1P1Q9H4R4 102 aa4.73□□□□□ -1.65
ATXN3-230ENST00000554673 ZNF665Q9H7R5 613 aa4.73□□□□□ -1.65
ATXN3-230ENST00000554673 NAA60Q9H7X0 242 aa4.73□□□□□ -1.65
ATXN3-230ENST00000554673 NECAP2Q9NVZ3 263 aa4.73□□□□□ -1.65
ATXN3-230ENST00000554673 SDHAF2Q9NX18 166 aa4.73□□□□□ -1.65
ATXN3-230ENST00000554673 OR5AC2Q9NZP5 309 aa4.73□□□□□ -1.65
ATXN3-230ENST00000554673 KIAA1456Q9P272 454 aa4.73□□□□□ -1.65
ATXN3-230ENST00000554673 RPUSD1Q9UJJ7 312 aaKnown RBP4.73□□□□□ -1.65
ATXN3-230ENST00000554673 OR2W1Q9Y3N9 320 aa4.73□□□□□ -1.65
ATXN3-230ENST00000554673 RFNGQ9Y644 331 aa4.73□□□□□ -1.65
ATXN3-230ENST00000554673 ABCA1O95477 2261 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 ITPR3Q14573 2671 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 TRAV3A0A0B4J244 114 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 KBTBD11-OT1A0A1B0GTJ5 212 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 CGB1A6NKQ9 187 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 SRRM4A7MD48 611 aaKnown RBP4.72□□□□□ -1.65
ATXN3-230ENST00000554673 LY6LH3BQJ8 138 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 H7C1Q1 480 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 GOSR2O14653 212 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 MPPED1O15442 326 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 PITX3O75364 302 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 CCNKO75909 580 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 DUS4LO95620 317 aaKnown RBP4.72□□□□□ -1.65
ATXN3-230ENST00000554673 IGHV2-5P01817 119 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 HLA-AP01891 365 aaKnown RBP4.72□□□□□ -1.65
ATXN3-230ENST00000554673 MMP9P14780 707 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 UCP1P25874 307 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 CAMPP49913 170 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 PAX9P55771 341 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 EDDM3BP56851 147 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 SNRPD2P62316 118 aaKnown RBP4.72□□□□□ -1.65
ATXN3-230ENST00000554673 SURF2Q15527 256 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-230ENST00000554673 CD300EQ496F6 205 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-230ENST00000554673 GGNBP1Q5YKI7 109 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 WDR73Q6P4I2 378 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 UNQ6126/PRO20091Q6UXV3 157 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 AKAP14Q86UN6 197 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 FAM185AQ8N0U4 392 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 C12orf45Q8N5I9 185 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-230ENST00000554673 LRTM2Q8N967 370 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 DRAXINQ8NBI3 349 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-230ENST00000554673 C10orf105Q8TEF2 133 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 TMEM170AQ8WVE7 144 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 IL1F10Q8WWZ1 152 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 PHF21AQ96BD5 680 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 SEC22AQ96IW7 307 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 TBX15Q96SF7 602 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 ZNF436Q9C0F3 470 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-230ENST00000554673 BPESC1Q9GZL8 116 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 SLC5A7Q9GZV3 580 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 FAM234AQ9H0X4 552 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 SIRPDQ9H106 197 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 PATZ1Q9HBE1 687 aaKnown RBP4.72□□□□□ -1.65
ATXN3-230ENST00000554673 SPACA1Q9HBV2 294 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 CHMP1AQ9HD42 196 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-230ENST00000554673 NGBQ9NPG2 151 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 COPZ2Q9P299 210 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 CLN8Q9UBY8 286 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 TRAPPC2LQ9UL33 140 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 PSG11Q9UQ72 335 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 RCL1Q9Y2P8 373 aaKnown RBP4.72□□□□□ -1.65
ATXN3-230ENST00000554673 SVEP1Q4LDE5 3571 aa4.72□□□□□ -1.65
ATXN3-230ENST00000554673 SAA2-SAA4A0A096LPE2 208 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 A0A0B4J2A0 478 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 E7EUB6 86 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 YPEL1O60688 119 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 PRAF2O60831 178 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 IGLV1-47P01700 117 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 C1QBP02746 253 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 ELANEP08246 267 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 IL6RP08887 468 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-230ENST00000554673 SAA2P0DJI9 122 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-230ENST00000554673 CT45A6P0DMU7 189 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 CT45A5P0DMU8 189 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 CT45A7P0DMV0 189 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 PGAM2P15259 253 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 PAX1P15863 534 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 RPA2P15927 270 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 TNFRSF1AP19438 455 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 DUTP33316 252 aaKnown RBP4.71□□□□□ -1.66
ATXN3-230ENST00000554673 CEACAM6P40199 344 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 INPP1P49441 399 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 EFNA4P52798 201 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 SLURP1P55000 103 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 ARPC4P59998 168 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 MRPS11P82912 194 aaKnown RBP4.71□□□□□ -1.66
ATXN3-230ENST00000554673 HTD2P86397 168 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 TMEM128Q5BJH2 165 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 OR2B11Q5JQS5 317 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 SLC25A48Q6ZT89 311 aaKnown RBP4.71□□□□□ -1.66
ATXN3-230ENST00000554673 MOB1BQ7L9L4 216 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 SLC35G3Q8N808 338 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 OR4D5Q8NGN0 318 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 RTN4IP1Q8WWV3 396 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-230ENST00000554673 GPR146Q96CH1 333 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 TMEM56Q96MV1 263 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 YPEL2Q96QA6 119 aa4.71□□□□□ -1.66
ATXN3-230ENST00000554673 MRPL20Q9BYC9 149 aaKnown RBP4.71□□□□□ -1.66
ATXN3-230ENST00000554673 TMEM222Q9H0R3 208 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms