RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 APOA2P02652 100 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 CT45A10P0DMU9 189 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 CD99P14209 185 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 TSPOP30536 169 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 CTRLP40313 264 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 LHX2P50458 406 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 CRISP3P54108 245 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 TAS2R31P59538 309 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 GRB2P62993 217 aaKnown RBP3.69□□□□□ -1.82
ATXN3-227ENST00000554491 PSG9Q00887 426 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 SPHARQ15513 63 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 SOHLH1Q5JUK2 328 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 FAM69BQ5VUD6 431 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 ZNF474Q6S9Z5 364 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-227ENST00000554491 FAM57BQ71RH2 274 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 MDGA2Q7Z553 956 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 ZNF429Q86V71 674 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 TMEM123Q8N131 208 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 UMODL1-AS1Q8N2C9 162 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 TTC9CQ8N5M4 171 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 KRTCAP2Q8N6L1 136 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 OR52R1Q8NGF1 315 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 OR52E2Q8NGJ4 325 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 OR4X1Q8NH49 305 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 OR4A16Q8NH70 328 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 ZNRF2Q8NHG8 242 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 SYNPRQ8TBG9 265 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 SLC25A40Q8TBP6 338 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 SSC4DQ8WTU2 575 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 PTPMT1Q8WUK0 201 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-227ENST00000554491 TMEM170AQ8WVE7 144 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 SECTM1Q8WVN6 248 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 PPCDCQ96CD2 204 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 MSI2Q96DH6 328 aaKnown RBP3.69□□□□□ -1.82
ATXN3-227ENST00000554491 PCED1BQ96HM7 432 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 ZNF681Q96N22 645 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 GPER1Q99527 375 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 SLC25A21Q9BQT8 299 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-227ENST00000554491 PYGO2Q9BRQ0 406 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 EBPLQ9BY08 206 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 SAMD10Q9BYL1 202 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 NPFFR1Q9GZQ6 430 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 TMEM133Q9H2Q1 129 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 MDFICQ9P1T7 246 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 ANXA10Q9UJ72 324 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 LSM2Q9Y333 95 aaKnown RBP3.69□□□□□ -1.82
ATXN3-227ENST00000554491 CCDC168Q8NDH2 2452 aa3.69□□□□□ -1.82
ATXN3-227ENST00000554491 ESPL1Q14674 2120 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 AKAP9Q99996 3911 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 SCN1AP35498 2009 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 SHANK1Q9Y566 2161 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 IGLV3-10A0A075B6K4 115 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 TRAV36DV7A0A075B6V5 113 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 TRAV14DV4A0A0A6YYC5 116 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 A0A1W2PRD5 423 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 TLCD2A6NGC4 264 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 NPIPB5A8MRT5 1133 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 A8MT66 165 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 C9JQL5 133 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 F5H5K5 113 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 FAM72CH0Y354 149 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 GABARAPH6UMI1 98 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 H7C1C5 153 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 M0QZQ0 153 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 FXYD1O00168 92 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 PLPP3O14495 311 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 TNFSF11O14788 317 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 TAAR5O14804 337 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 DHHO43323 396 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 HYPMO75409 117 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 OR7C1O76099 320 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-227ENST00000554491 DIRAS1O95057 198 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 SOX14O95416 240 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 HLA-HP01893 362 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 FGF1P05230 155 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 CRYGDP07320 174 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 HIST1H1DP16402 221 aaKnown RBP3.68□□□□□ -1.82
ATXN3-227ENST00000554491 IGFBP2P18065 325 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 ELK1P19419 428 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 EDN2P20800 178 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 RPS4Y1P22090 263 aaKnown RBP3.68□□□□□ -1.82
ATXN3-227ENST00000554491 GPX3P22352 226 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 PRKACGP22612 351 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 PRTN3P24158 256 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 CD34P28906 385 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 PRDX2P32119 198 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 HRH1P35367 487 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 TNFRSF4P43489 277 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 P2RY1P47900 373 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 HINT1P49773 126 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-227ENST00000554491 CAMPP49913 170 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 ZNF133P52736 654 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-227ENST00000554491 RPL27P61353 136 aaKnown RBP3.68□□□□□ -1.82
ATXN3-227ENST00000554491 LCN6P62502 163 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 BCL2L1Q07817 233 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 PMVKQ15126 192 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 KRTAP27-1Q3LI81 207 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 TP53I3Q53FA7 332 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 ZNF678Q5SXM1 525 aa3.68□□□□□ -1.82
ATXN3-227ENST00000554491 FAM72AQ5TYM5 149 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms