RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 IGKV1-39P01597 117 aa12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 IGKV1D-39P04432 117 aa12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 F2RP25116 425 aa12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 KLF3P57682 345 aaPredicted RBP12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 SPRNQ5BIV9 151 aa12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 FIP1L1Q6UN15 594 aaKnown RBP12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 DPPA3Q6W0C5 159 aa12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 WFDC8Q8IUA0 241 aa12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 RBKSQ9H477 322 aa12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 OR1A1Q9P1Q5 309 aa12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 CACNG5Q9UF02 275 aa12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 ERRFI1Q9UJM3 462 aaPredicted RBP12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 COL6A6A6NMZ7 2263 aa12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 C16orf97H3BN30 126 aa12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 DFFBO76075 338 aa12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 SNRPCP09234 159 aaKnown RBP12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 GLRXP35754 106 aa12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 COL10A1Q03692 680 aa12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 AESQ08117 197 aa12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 SRSF7Q16629 238 aaKnown RBP eCLIP12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 ZNF497Q6ZNH5 498 aa12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 TPRX1Q8N7U7 411 aa12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 RNASE11Q8TAA1 199 aaKnown RBP12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 HIPK2Q9H2X6 1198 aa12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 GAB2Q9UQC2 676 aa12.25□□□□□ -0.45
PPP4R3A-201ENST00000554308 PKDREJQ9NTG1 2253 aa12.24□□□□□ -0.45
PPP4R3A-201ENST00000554308 AMBPP02760 352 aa12.24□□□□□ -0.45
PPP4R3A-201ENST00000554308 CD40P25942 277 aa12.24□□□□□ -0.45
PPP4R3A-201ENST00000554308 ADIRFQ15847 76 aa12.24□□□□□ -0.45
PPP4R3A-201ENST00000554308 ACP7Q6ZNF0 438 aa12.24□□□□□ -0.45
PPP4R3A-201ENST00000554308 MRGPRGQ86SM5 289 aa12.24□□□□□ -0.45
PPP4R3A-201ENST00000554308 ZNF525Q8N782 197 aa12.24□□□□□ -0.45
PPP4R3A-201ENST00000554308 SCGB1C1Q8TD33 95 aa12.24□□□□□ -0.45
PPP4R3A-201ENST00000554308 LRRC29Q8WV35 223 aa12.24□□□□□ -0.45
PPP4R3A-201ENST00000554308 OR2V2Q96R30 315 aa12.24□□□□□ -0.45
PPP4R3A-201ENST00000554308 HES4Q9HCC6 221 aa12.24□□□□□ -0.45
PPP4R3A-201ENST00000554308 COL12A1Q99715 3063 aa12.24□□□□□ -0.45
PPP4R3A-201ENST00000554308 TSTD3H0UI37 97 aa12.24□□□□□ -0.45
PPP4R3A-201ENST00000554308 CTXN2P0C2S0 81 aa12.24□□□□□ -0.45
PPP4R3A-201ENST00000554308 GZMHP20718 246 aa12.24□□□□□ -0.45
PPP4R3A-201ENST00000554308 C16orf82Q7Z2V1 217 aa12.24□□□□□ -0.45
PPP4R3A-201ENST00000554308 C1orf174Q8IYL3 243 aa12.24□□□□□ -0.45
PPP4R3A-201ENST00000554308 MISP3Q96FF7 219 aa12.24□□□□□ -0.45
PPP4R3A-201ENST00000554308 ELOVL1Q9BW60 279 aa12.24□□□□□ -0.45
PPP4R3A-201ENST00000554308 METRNQ9UJH8 293 aa12.24□□□□□ -0.45
PPP4R3A-201ENST00000554308 TRBV24-1A0A075B6N3 115 aa12.23□□□□□ -0.45
PPP4R3A-201ENST00000554308 DUXBA0A1W2PPF3 345 aa12.23□□□□□ -0.45
PPP4R3A-201ENST00000554308 SLC31A2O15432 143 aa12.23□□□□□ -0.45
PPP4R3A-201ENST00000554308 IGHV3-13P01766 116 aa12.23□□□□□ -0.45
PPP4R3A-201ENST00000554308 SERPINE2P07093 398 aa12.23□□□□□ -0.45
PPP4R3A-201ENST00000554308 PRSS8Q16651 343 aa12.23□□□□□ -0.45
PPP4R3A-201ENST00000554308 RBM7Q9Y580 266 aaKnown RBP12.23□□□□□ -0.45
PPP4R3A-201ENST00000554308 TRGV8A0A0C4DH27 118 aa12.22□□□□□ -0.45
PPP4R3A-201ENST00000554308 IFNL4K9M1U5 179 aa12.22□□□□□ -0.45
PPP4R3A-201ENST00000554308 IGKV1D-33P01593 117 aa12.22□□□□□ -0.45
PPP4R3A-201ENST00000554308 IGKV1-33P01594 117 aa12.22□□□□□ -0.45
PPP4R3A-201ENST00000554308 GZMBP10144 247 aa12.22□□□□□ -0.45
PPP4R3A-201ENST00000554308 GABRA2P47869 451 aa12.22□□□□□ -0.45
PPP4R3A-201ENST00000554308 PNRC1Q12796 327 aaPredicted RBP12.22□□□□□ -0.45
PPP4R3A-201ENST00000554308 OR10A7Q8NGE5 316 aa12.22□□□□□ -0.45
PPP4R3A-201ENST00000554308 MBD3L1Q8WWY6 194 aa12.22□□□□□ -0.45
PPP4R3A-201ENST00000554308 MRPL37Q9BZE1 423 aaKnown RBP12.22□□□□□ -0.45
PPP4R3A-201ENST00000554308 TMEM242Q9NWH2 141 aa12.22□□□□□ -0.45
PPP4R3A-201ENST00000554308 PSENENQ9NZ42 101 aa12.22□□□□□ -0.45
PPP4R3A-201ENST00000554308 ZNF835Q9Y2P0 537 aa12.22□□□□□ -0.45
PPP4R3A-201ENST00000554308 TRBV6-6A0A0A6YYG2 114 aa12.22□□□□□ -0.45
PPP4R3A-201ENST00000554308 MAP1LC3B2A6NCE7 125 aa12.22□□□□□ -0.45
PPP4R3A-201ENST00000554308 IGKV1-5P01602 117 aa12.22□□□□□ -0.45
PPP4R3A-201ENST00000554308 MDH2P40926 338 aaKnown RBP12.22□□□□□ -0.45
PPP4R3A-201ENST00000554308 SSTP61278 116 aa12.22□□□□□ -0.45
PPP4R3A-201ENST00000554308 MOGAT3Q86VF5 341 aa12.22□□□□□ -0.45
PPP4R3A-201ENST00000554308 GATAD1Q8WUU5 269 aa12.22□□□□□ -0.45
PPP4R3A-201ENST00000554308 RPUSD4Q96CM3 377 aaKnown RBP12.22□□□□□ -0.45
PPP4R3A-201ENST00000554308 SMIM7Q9BQ49 75 aa12.22□□□□□ -0.45
PPP4R3A-201ENST00000554308 MAP1LC3BQ9GZQ8 125 aa12.22□□□□□ -0.45
PPP4R3A-201ENST00000554308 PITPNC1Q9UKF7 332 aa12.22□□□□□ -0.45
PPP4R3A-201ENST00000554308 PPP1R3CQ9UQK1 317 aa12.22□□□□□ -0.45
PPP4R3A-201ENST00000554308 LAMP3Q9UQV4 416 aa12.22□□□□□ -0.45
PPP4R3A-201ENST00000554308 OR2W1Q9Y3N9 320 aa12.22□□□□□ -0.45
PPP4R3A-201ENST00000554308 IGHV3OR15-7A0A075B7D8 119 aa12.21□□□□□ -0.45
PPP4R3A-201ENST00000554308 OPN1MWP04001 364 aa12.21□□□□□ -0.45
PPP4R3A-201ENST00000554308 OPN1MW2P0DN77 364 aa12.21□□□□□ -0.45
PPP4R3A-201ENST00000554308 OPN1MW3P0DN78 364 aa12.21□□□□□ -0.45
PPP4R3A-201ENST00000554308 ZNF16P17020 682 aaPredicted RBP12.21□□□□□ -0.45
PPP4R3A-201ENST00000554308 CD81P60033 236 aa12.21□□□□□ -0.45
PPP4R3A-201ENST00000554308 SMIM21Q3B7S5 101 aa12.21□□□□□ -0.45
PPP4R3A-201ENST00000554308 FAM53AQ6NSI3 398 aaPredicted RBP12.21□□□□□ -0.45
PPP4R3A-201ENST00000554308 TMEM108Q6UXF1 575 aa12.21□□□□□ -0.45
PPP4R3A-201ENST00000554308 TMEM183AQ8IXX5 376 aa12.21□□□□□ -0.45
PPP4R3A-201ENST00000554308 ZNF664Q8N3J9 261 aa12.21□□□□□ -0.45
PPP4R3A-201ENST00000554308 OR4C12Q96R67 309 aa12.21□□□□□ -0.45
PPP4R3A-201ENST00000554308 RAB40CQ96S21 281 aa12.21□□□□□ -0.45
PPP4R3A-201ENST00000554308 VAX2Q9UIW0 290 aa12.21□□□□□ -0.45
PPP4R3A-201ENST00000554308 TACC2O95359 2948 aa12.21□□□□□ -0.45
PPP4R3A-201ENST00000554308 SYNGR2O43760 224 aa12.21□□□□□ -0.45
PPP4R3A-201ENST00000554308 IGLV2-14P01704 120 aa12.21□□□□□ -0.45
PPP4R3A-201ENST00000554308 EGR1P18146 543 aa12.21□□□□□ -0.45
PPP4R3A-201ENST00000554308 CEACAM6P40199 344 aa12.21□□□□□ -0.45
PPP4R3A-201ENST00000554308 UCNP55089 124 aa12.21□□□□□ -0.45
PPP4R3A-201ENST00000554308 SELENOVP59797 346 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms