RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 PMP22Q01453 160 aa8.04□□□□□ -1.12
SIX4-202ENST00000554079 TMEM249Q2WGJ8 235 aa8.04□□□□□ -1.12
SIX4-202ENST00000554079 INO80CQ6PI98 192 aaPredicted RBP8.04□□□□□ -1.12
SIX4-202ENST00000554079 ADAMTSL4Q6UY14 1074 aa8.04□□□□□ -1.12
SIX4-202ENST00000554079 CA13Q8N1Q1 262 aa8.04□□□□□ -1.12
SIX4-202ENST00000554079 MTURNQ8N3F0 131 aa8.04□□□□□ -1.12
SIX4-202ENST00000554079 OR10AG1Q8NH19 301 aa8.04□□□□□ -1.12
SIX4-202ENST00000554079 CACNG8Q8WXS5 425 aa8.04□□□□□ -1.12
SIX4-202ENST00000554079 LSM10Q969L4 123 aaKnown RBP8.04□□□□□ -1.12
SIX4-202ENST00000554079 KCNK17Q96T54 332 aa8.04□□□□□ -1.12
SIX4-202ENST00000554079 TMEM70Q9BUB7 260 aa8.04□□□□□ -1.12
SIX4-202ENST00000554079 FGF21Q9NSA1 209 aa8.04□□□□□ -1.12
SIX4-202ENST00000554079 PSG8Q9UQ74 426 aa8.04□□□□□ -1.12
SIX4-202ENST00000554079 ZNF816-ZNF321PA0A0X1KG74 233 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 SCO2A0A1W2PP80 73 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 E9PLN8 166 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 IGLV3-1P01715 115 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 HLA-DQA1P01909 254 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 AMY1AP04745 511 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 HTR1DP28221 377 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 HERV-K104P63124 156 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 RPL24P83731 157 aaKnown RBP8.03□□□□□ -1.12
SIX4-202ENST00000554079 TGFBR3Q03167 851 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 OR8B8Q15620 311 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 TMEM97Q5BJF2 176 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 Q6ZRM9 215 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 TMEM25Q86YD3 366 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 GAPTQ8N292 157 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 BAHD1Q8TBE0 780 aaPredicted RBP8.03□□□□□ -1.12
SIX4-202ENST00000554079 TMEM45BQ96B21 275 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 AP1S3Q96PC3 154 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 WNT6Q9Y6F9 365 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 ARL2-SNX15V9GYD0 113 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 A0A0G2JLM5 398 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 C5orf63A6NC05 138 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 MUC22E2RYF6 1773 aaPredicted RBP8.03□□□□□ -1.12
SIX4-202ENST00000554079 RBMXL2O75526 392 aaKnown RBP8.03□□□□□ -1.12
SIX4-202ENST00000554079 LIPFP07098 398 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 CISD3P0C7P0 127 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 DEFA4P12838 97 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 COX5AP20674 150 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 CYB561P49447 251 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 RPS18P62269 152 aaKnown RBP8.03□□□□□ -1.12
SIX4-202ENST00000554079 IZUMO4Q1ZYL8 232 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 VSTM2AQ8TAG5 236 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 PIGTQ969N2 578 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 LYZL4Q96KX0 146 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 NAA38Q9BRA0 125 aaKnown RBP8.03□□□□□ -1.12
SIX4-202ENST00000554079 VN1R3Q9BXE9 311 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 BOKQ9UMX3 212 aaPredicted RBP8.03□□□□□ -1.12
SIX4-202ENST00000554079 SLC17A4Q9Y2C5 497 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 SPACA6W5XKT8 324 aa8.03□□□□□ -1.12
SIX4-202ENST00000554079 TRBV7-9A0A0J9YWB2 115 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 A0A1W2PPM0 123 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 TGFBR3LH3BV60 316 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 HSBP1O75506 76 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 FBLP22087 321 aaKnown RBP8.02□□□□□ -1.13
SIX4-202ENST00000554079 CCL14Q16627 93 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 HNRNPA1L2Q32P51 320 aaKnown RBP8.02□□□□□ -1.13
SIX4-202ENST00000554079 SPATA31B1PQ5VZV4 182 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 WDR5BQ86VZ2 330 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 DTX1Q86Y01 620 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 ZDHHC23Q8IYP9 409 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 SPSB4Q96A44 273 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 WDR54Q9H977 334 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 TECRQ9NZ01 308 aaKnown RBP8.02□□□□□ -1.13
SIX4-202ENST00000554079 Q9Y3F1 56 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 SPCS1Q9Y6A9 102 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 LY96Q9Y6Y9 160 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 BRCA2P51587 3418 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 IGKV1D-13A0A0B4J2D9 117 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 NRG2O14511 850 aaPredicted RBP8.02□□□□□ -1.13
SIX4-202ENST00000554079 TNFRSF13BO14836 293 aaPredicted RBP8.02□□□□□ -1.13
SIX4-202ENST00000554079 ZNF207O43670 478 aaKnown RBP8.02□□□□□ -1.13
SIX4-202ENST00000554079 DUSP11O75319 330 aaKnown RBP8.02□□□□□ -1.13
SIX4-202ENST00000554079 RHBDL1O75783 438 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 ADH4P08319 380 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 CELA3AP09093 270 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 IGKV1-13P0DP09 117 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 IL11P20809 199 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 UQCRFS1P47985 274 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 TFF3Q07654 80 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 KLF5Q13887 457 aaPredicted RBP8.02□□□□□ -1.13
SIX4-202ENST00000554079 TMEM14EPQ6UXP3 125 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 C16orf52Q8NHV5 167 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 DEFB118Q96PH6 123 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 C19orf24Q9BVV8 132 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 MS4A6AQ9H2W1 248 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 TNFRSF19Q9NS68 423 aa8.02□□□□□ -1.13
SIX4-202ENST00000554079 MRPL16Q9NX20 251 aaKnown RBP8.02□□□□□ -1.13
SIX4-202ENST00000554079 VWC2LB2RUY7 222 aa8.01□□□□□ -1.13
SIX4-202ENST00000554079 C9JCJ5 164 aa8.01□□□□□ -1.13
SIX4-202ENST00000554079 SPINK4O60575 86 aa8.01□□□□□ -1.13
SIX4-202ENST00000554079 CLDN1O95832 211 aa8.01□□□□□ -1.13
SIX4-202ENST00000554079 APCSP02743 223 aa8.01□□□□□ -1.13
SIX4-202ENST00000554079 CA3P07451 260 aa8.01□□□□□ -1.13
SIX4-202ENST00000554079 HIST1H1EP10412 219 aaKnown RBP8.01□□□□□ -1.13
SIX4-202ENST00000554079 USF1P22415 310 aaPredicted RBP8.01□□□□□ -1.13
SIX4-202ENST00000554079 OR1D4P47884 311 aa8.01□□□□□ -1.13
SIX4-202ENST00000554079 PLCXD2Q0VAA5 305 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms